RNA–Protein interactions for RNA: ENST00000510948.1

SMAD1-208, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-208ENST00000510948 CHIC1Q5VXU3 224 aa17.17■□□□□ 0.34
SMAD1-208ENST00000510948 AEBP2Q6ZN18 517 aaPredicted RBP17.09■□□□□ 0.33
SMAD1-208ENST00000510948 PHF23Q9BUL5 403 aaPredicted RBP15.16■□□□□ 0.02
SMAD1-208ENST00000510948 SENP3Q9H4L4 574 aaPredicted RBP14.44□□□□□ -0.1
SMAD1-208ENST00000510948 PLPPR3Q6T4P5 718 aa14.16□□□□□ -0.14
SMAD1-208ENST00000510948 FOXD1Q16676 465 aa13.34□□□□□ -0.27
SMAD1-208ENST00000510948 ADRA2BP18089 450 aa13.25□□□□□ -0.29
SMAD1-208ENST00000510948 PPP6R1Q9UPN7 881 aa13.22□□□□□ -0.29
SMAD1-208ENST00000510948 KCNA4P22459 653 aa12.78□□□□□ -0.36
SMAD1-208ENST00000510948 PIAS4Q8N2W9 510 aaPredicted RBP12.69□□□□□ -0.38
SMAD1-208ENST00000510948 PPP4R3CPQ6ZMV5 832 aa12.54□□□□□ -0.4
SMAD1-208ENST00000510948 EHMT2Q96KQ7 1210 aa12.43□□□□□ -0.42
SMAD1-208ENST00000510948 NCBP3Q53F19 620 aaKnown RBP12.37□□□□□ -0.43
SMAD1-208ENST00000510948 MSH5O43196 834 aa12.31□□□□□ -0.44
SMAD1-208ENST00000510948 SLC4A1APQ9BWU0 796 aaKnown RBP12.26□□□□□ -0.45
SMAD1-208ENST00000510948 NPM3O75607 178 aaKnown RBP12.16□□□□□ -0.46
SMAD1-208ENST00000510948 SCAF1Q9H7N4 1312 aaKnown RBP12.12□□□□□ -0.47
SMAD1-208ENST00000510948 CSRNP3Q8WYN3 585 aa12.1□□□□□ -0.47
SMAD1-208ENST00000510948 CNKSR2Q8WXI2 1034 aa12.09□□□□□ -0.47
SMAD1-208ENST00000510948 POTEDQ86YR6 584 aa11.95□□□□□ -0.5
SMAD1-208ENST00000510948 MAPK8IP2Q13387 824 aaPredicted RBP11.87□□□□□ -0.51
SMAD1-208ENST00000510948 DNAJC5BQ9UF47 199 aa11.76□□□□□ -0.53
SMAD1-208ENST00000510948 ZBTB22O15209 634 aa11.75□□□□□ -0.53
SMAD1-208ENST00000510948 RNF216Q9NWF9 866 aaPredicted RBP11.73□□□□□ -0.53
SMAD1-208ENST00000510948 FOXD4L1Q9NU39 408 aa11.62□□□□□ -0.55
SMAD1-208ENST00000510948 DMRT2Q9Y5R5 561 aa11.6□□□□□ -0.55
SMAD1-208ENST00000510948 HOXD11P31277 338 aaPredicted RBP11.56□□□□□ -0.56
SMAD1-208ENST00000510948 SLC4A2P04920 1241 aa11.37□□□□□ -0.59
SMAD1-208ENST00000510948 MYCNP04198 464 aaPredicted RBP11.23□□□□□ -0.61
SMAD1-208ENST00000510948 ATXN8OSP0DMR3 200 aa11.2□□□□□ -0.62
SMAD1-208ENST00000510948 DCAF8L1A6NGE4 600 aa11.06□□□□□ -0.64
SMAD1-208ENST00000510948 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.02□□□□□ -0.65
SMAD1-208ENST00000510948 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.92□□□□□ -0.66
SMAD1-208ENST00000510948 HNRNPUL2Q1KMD3 747 aaKnown RBP10.92□□□□□ -0.66
SMAD1-208ENST00000510948 FKBP8Q14318 412 aa10.89□□□□□ -0.67
SMAD1-208ENST00000510948 SAMD1Q6SPF0 538 aaPredicted RBP10.89□□□□□ -0.67
SMAD1-208ENST00000510948 ATF5Q9Y2D1 282 aaPredicted RBP10.88□□□□□ -0.67
SMAD1-208ENST00000510948 U3KPZ7 1027 aaPredicted RBP10.87□□□□□ -0.67
SMAD1-208ENST00000510948 AMER1Q5JTC6 1135 aaPredicted RBP10.78□□□□□ -0.68
SMAD1-208ENST00000510948 RTN4Q9NQC3 1192 aaKnown RBP10.74□□□□□ -0.69
SMAD1-208ENST00000510948 APLP2Q06481 763 aa10.69□□□□□ -0.7
SMAD1-208ENST00000510948 ZNF219Q9P2Y4 722 aaPredicted RBP10.68□□□□□ -0.7
SMAD1-208ENST00000510948 CACNB1Q02641 598 aaPredicted RBP10.53□□□□□ -0.72
SMAD1-208ENST00000510948 RNF39Q9H2S5 420 aa10.49□□□□□ -0.73
SMAD1-208ENST00000510948 SLC24A1O60721 1099 aa10.48□□□□□ -0.73
SMAD1-208ENST00000510948 SPDYE4A6NLX3 237 aa10.44□□□□□ -0.74
SMAD1-208ENST00000510948 TRHP20396 242 aaPredicted RBP10.44□□□□□ -0.74
SMAD1-208ENST00000510948 MKRN4PQ13434 485 aaPredicted RBP10.44□□□□□ -0.74
SMAD1-208ENST00000510948 SPINK5Q9NQ38 1064 aaPredicted RBP10.43□□□□□ -0.74
SMAD1-208ENST00000510948 FBLN2P98095 1184 aa10.41□□□□□ -0.74
SMAD1-208ENST00000510948 FBXO3Q9UK99 471 aa10.41□□□□□ -0.74
SMAD1-208ENST00000510948 POLA2Q14181 598 aa10.4□□□□□ -0.74
SMAD1-208ENST00000510948 CAPN15O75808 1086 aa10.38□□□□□ -0.75
SMAD1-208ENST00000510948 C1QBPQ07021 282 aaKnown RBP10.37□□□□□ -0.75
SMAD1-208ENST00000510948 PROM2Q8N271 834 aa10.34□□□□□ -0.75
SMAD1-208ENST00000510948 ZBTB12Q9Y330 459 aaPredicted RBP10.25□□□□□ -0.77
SMAD1-208ENST00000510948 VASPP50552 380 aaPredicted RBP10.23□□□□□ -0.77
SMAD1-208ENST00000510948 ABCB7O75027 752 aa10.2□□□□□ -0.78
SMAD1-208ENST00000510948 IFNLR1Q8IU57 520 aaPredicted RBP10.13□□□□□ -0.79
SMAD1-208ENST00000510948 DSG3P32926 999 aa10.09□□□□□ -0.79
SMAD1-208ENST00000510948 ZNF692Q9BU19 519 aaPredicted RBP10.06□□□□□ -0.8
SMAD1-208ENST00000510948 SPDYE2BA6NHP3 402 aa10.02□□□□□ -0.81
SMAD1-208ENST00000510948 SPDYE6P0CI01 402 aa10.02□□□□□ -0.81
SMAD1-208ENST00000510948 SPDYE2Q495Y8 402 aa10.02□□□□□ -0.81
SMAD1-208ENST00000510948 STAG3Q9UJ98 1225 aa10□□□□□ -0.81
SMAD1-208ENST00000510948 OSCARQ8IYS5 282 aa9.98□□□□□ -0.81
SMAD1-208ENST00000510948 PKD2Q13563 968 aa9.97□□□□□ -0.81
SMAD1-208ENST00000510948 SSUH2Q9Y2M2 353 aa9.97□□□□□ -0.81
SMAD1-208ENST00000510948 KLHL34Q8N239 644 aa9.96□□□□□ -0.82
SMAD1-208ENST00000510948 PLCB2Q00722 1185 aa9.94□□□□□ -0.82
SMAD1-208ENST00000510948 SPOCK2Q92563 424 aa9.94□□□□□ -0.82
SMAD1-208ENST00000510948 DCAF8L2P0C7V8 631 aa9.92□□□□□ -0.82
SMAD1-208ENST00000510948 PABPN1Q86U42 306 aaKnown RBP eCLIP9.92□□□□□ -0.82
SMAD1-208ENST00000510948 PLCD3Q8N3E9 789 aa9.9□□□□□ -0.82
SMAD1-208ENST00000510948 MIER1Q8N108 512 aa9.88□□□□□ -0.83
SMAD1-208ENST00000510948 ECM2O94769 699 aaPredicted RBP9.84□□□□□ -0.83
SMAD1-208ENST00000510948 HAP1P54257 671 aaPredicted RBP9.79□□□□□ -0.84
SMAD1-208ENST00000510948 PLEKHG5O94827 1062 aa9.78□□□□□ -0.84
SMAD1-208ENST00000510948 ZBTB47Q9UFB7 747 aaPredicted RBP9.77□□□□□ -0.85
SMAD1-208ENST00000510948 BBXQ8WY36 941 aaPredicted RBP9.74□□□□□ -0.85
SMAD1-208ENST00000510948 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.73□□□□□ -0.85
SMAD1-208ENST00000510948 RGL2O15211 777 aa9.71□□□□□ -0.86
SMAD1-208ENST00000510948 NPM1P06748 294 aaKnown RBP eCLIP9.71□□□□□ -0.86
SMAD1-208ENST00000510948 CIZ1Q9ULV3 898 aaPredicted RBP9.7□□□□□ -0.86
SMAD1-208ENST00000510948 VSIG10Q8N0Z9 540 aa9.69□□□□□ -0.86
SMAD1-208ENST00000510948 PAXIP1Q6ZW49 1069 aaPredicted RBP9.65□□□□□ -0.86
SMAD1-208ENST00000510948 TRIM41Q8WV44 630 aa9.64□□□□□ -0.87
SMAD1-208ENST00000510948 CFAP44Q96MT7 982 aa9.62□□□□□ -0.87
SMAD1-208ENST00000510948 SPDYE1Q8NFV5 336 aaPredicted RBP9.6□□□□□ -0.87
SMAD1-208ENST00000510948 AKT1S1Q96B36 256 aa9.6□□□□□ -0.87
SMAD1-208ENST00000510948 RBM42Q9BTD8 480 aaKnown RBP9.6□□□□□ -0.87
SMAD1-208ENST00000510948 SPRYD3Q8NCJ5 442 aa9.59□□□□□ -0.87
SMAD1-208ENST00000510948 CHGAP10645 457 aaKnown RBP9.58□□□□□ -0.88
SMAD1-208ENST00000510948 GSE1Q14687 1217 aa9.58□□□□□ -0.88
SMAD1-208ENST00000510948 BCANQ96GW7 911 aa9.58□□□□□ -0.88
SMAD1-208ENST00000510948 NUBP1P53384 320 aa9.56□□□□□ -0.88
SMAD1-208ENST00000510948 KDM2AQ9Y2K7 1162 aa9.55□□□□□ -0.88
SMAD1-208ENST00000510948 PRR29P0C7W0 189 aa9.53□□□□□ -0.88
SMAD1-208ENST00000510948 CLEC11AQ9Y240 323 aa9.53□□□□□ -0.88
SMAD1-208ENST00000510948 DCAF8Q5TAQ9 597 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms