RNA–Protein interactions for RNA: ENST00000510774.1

ATP2C1-219, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-219ENST00000510774 TRIM47Q96LD4 638 aa10.58□□□□□ -0.72
ATP2C1-219ENST00000510774 NUCKS1Q9H1E3 243 aaKnown RBP10.58□□□□□ -0.72
ATP2C1-219ENST00000510774 ELP3Q9H9T3 547 aa10.58□□□□□ -0.72
ATP2C1-219ENST00000510774 FOXD3Q9UJU5 478 aaPredicted RBP10.58□□□□□ -0.72
ATP2C1-219ENST00000510774 H7C1W4 665 aa10.57□□□□□ -0.72
ATP2C1-219ENST00000510774 ATXN7O15265 892 aaPredicted RBP10.57□□□□□ -0.72
ATP2C1-219ENST00000510774 XYLBO75191 536 aa10.57□□□□□ -0.72
ATP2C1-219ENST00000510774 LAMC2Q13753 1193 aa10.57□□□□□ -0.72
ATP2C1-219ENST00000510774 KCNH4Q9UQ05 1017 aa10.57□□□□□ -0.72
ATP2C1-219ENST00000510774 PCDHGC4Q9Y5F7 938 aa10.57□□□□□ -0.72
ATP2C1-219ENST00000510774 TCF3P15923 654 aa10.56□□□□□ -0.72
ATP2C1-219ENST00000510774 GNA15P30679 374 aa10.56□□□□□ -0.72
ATP2C1-219ENST00000510774 RIPOR1Q6ZS17 1223 aa10.56□□□□□ -0.72
ATP2C1-219ENST00000510774 TRIM22Q8IYM9 498 aa10.56□□□□□ -0.72
ATP2C1-219ENST00000510774 GMCL1Q96IK5 515 aa10.56□□□□□ -0.72
ATP2C1-219ENST00000510774 FRMD6Q96NE9 622 aa10.56□□□□□ -0.72
ATP2C1-219ENST00000510774 TMEM63CQ9P1W3 806 aa10.56□□□□□ -0.72
ATP2C1-219ENST00000510774 NLRP13Q86W25 1043 aa10.55□□□□□ -0.72
ATP2C1-219ENST00000510774 CCDC155Q8N6L0 562 aa10.55□□□□□ -0.72
ATP2C1-219ENST00000510774 ZFYVE28Q9HCC9 887 aa10.55□□□□□ -0.72
ATP2C1-219ENST00000510774 NDFIP2Q9NV92 336 aa10.55□□□□□ -0.72
ATP2C1-219ENST00000510774 PHACTR2O75167 634 aa10.54□□□□□ -0.72
ATP2C1-219ENST00000510774 TNP2Q05952 138 aa10.54□□□□□ -0.72
ATP2C1-219ENST00000510774 PSMD2Q13200 908 aa10.54□□□□□ -0.72
ATP2C1-219ENST00000510774 IRX2Q9BZI1 471 aaPredicted RBP10.54□□□□□ -0.72
ATP2C1-219ENST00000510774 CHRDQ9H2X0 955 aa10.54□□□□□ -0.72
ATP2C1-219ENST00000510774 RNF19AQ9NV58 838 aa10.54□□□□□ -0.72
ATP2C1-219ENST00000510774 CUEDC1Q9NWM3 386 aaPredicted RBP10.54□□□□□ -0.72
ATP2C1-219ENST00000510774 DCDC2BA2VCK2 349 aa10.53□□□□□ -0.72
ATP2C1-219ENST00000510774 SORBS3O60504 671 aa10.53□□□□□ -0.72
ATP2C1-219ENST00000510774 SFSWAPQ12872 951 aaKnown RBP10.53□□□□□ -0.72
ATP2C1-219ENST00000510774 MRS2Q9HD23 443 aa10.53□□□□□ -0.72
ATP2C1-219ENST00000510774 ABI2Q9NYB9 513 aaPredicted RBP10.53□□□□□ -0.72
ATP2C1-219ENST00000510774 SMARCA2P51531 1590 aa10.52□□□□□ -0.72
ATP2C1-219ENST00000510774 KHNYNO15037 678 aaKnown RBP10.52□□□□□ -0.73
ATP2C1-219ENST00000510774 MAPTP10636 758 aaKnown RBP10.52□□□□□ -0.73
ATP2C1-219ENST00000510774 DBN1Q16643 649 aa10.52□□□□□ -0.73
ATP2C1-219ENST00000510774 TSNAXIP1Q2TAA8 658 aa10.52□□□□□ -0.73
ATP2C1-219ENST00000510774 USPL1Q5W0Q7 1092 aa10.52□□□□□ -0.73
ATP2C1-219ENST00000510774 CCDC74AQ96AQ1 378 aa10.52□□□□□ -0.73
ATP2C1-219ENST00000510774 ZNF837Q96EG3 531 aaPredicted RBP10.52□□□□□ -0.73
ATP2C1-219ENST00000510774 FAM161BQ96MY7 647 aa10.52□□□□□ -0.73
ATP2C1-219ENST00000510774 ITGA6P23229 1130 aa10.51□□□□□ -0.73
ATP2C1-219ENST00000510774 VEGFBP49765 207 aa10.51□□□□□ -0.73
ATP2C1-219ENST00000510774 CCINQ13939 588 aa10.51□□□□□ -0.73
ATP2C1-219ENST00000510774 LDLRAD1Q5T700 205 aa10.51□□□□□ -0.73
ATP2C1-219ENST00000510774 GSX2Q9BZM3 304 aa10.51□□□□□ -0.73
ATP2C1-219ENST00000510774 EFCC1Q9HA90 598 aa10.51□□□□□ -0.73
ATP2C1-219ENST00000510774 GMPR2Q9P2T1 348 aaKnown RBP10.51□□□□□ -0.73
ATP2C1-219ENST00000510774 SPG7Q9UQ90 795 aa10.51□□□□□ -0.73
ATP2C1-219ENST00000510774 BNIP3LO60238 219 aa10.5□□□□□ -0.73
ATP2C1-219ENST00000510774 CYB5RLQ6IPT4 315 aa10.5□□□□□ -0.73
ATP2C1-219ENST00000510774 PMEPA1Q969W9 287 aa10.5□□□□□ -0.73
ATP2C1-219ENST00000510774 BACH2Q9BYV9 841 aa10.5□□□□□ -0.73
ATP2C1-219ENST00000510774 STRN4Q9NRL3 753 aa10.5□□□□□ -0.73
ATP2C1-219ENST00000510774 CNTN3Q9P232 1028 aa10.5□□□□□ -0.73
ATP2C1-219ENST00000510774 GALNT12Q8IXK2 581 aa10.49□□□□□ -0.73
ATP2C1-219ENST00000510774 C1orf127Q8N9H9 656 aa10.49□□□□□ -0.73
ATP2C1-219ENST00000510774 MARK1Q9P0L2 795 aa10.49□□□□□ -0.73
ATP2C1-219ENST00000510774 VTI1BQ9UEU0 232 aa10.49□□□□□ -0.73
ATP2C1-219ENST00000510774 HCN2Q9UL51 889 aa10.49□□□□□ -0.73
ATP2C1-219ENST00000510774 ATXN7L1Q9ULK2 861 aaPredicted RBP10.49□□□□□ -0.73
ATP2C1-219ENST00000510774 AK5Q9Y6K8 562 aa10.49□□□□□ -0.73
ATP2C1-219ENST00000510774 SCAMP3O14828 347 aaKnown RBP10.48□□□□□ -0.73
ATP2C1-219ENST00000510774 GIPC1O14908 333 aa10.48□□□□□ -0.73
ATP2C1-219ENST00000510774 EREGO14944 169 aa10.48□□□□□ -0.73
ATP2C1-219ENST00000510774 TTC39BQ5VTQ0 682 aaPredicted RBP10.48□□□□□ -0.73
ATP2C1-219ENST00000510774 CCDC88BA6NC98 1476 aa10.48□□□□□ -0.73
ATP2C1-219ENST00000510774 ARHGEF11O15085 1522 aa10.48□□□□□ -0.73
ATP2C1-219ENST00000510774 SASH3O75995 380 aa10.47□□□□□ -0.73
ATP2C1-219ENST00000510774 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.47□□□□□ -0.73
ATP2C1-219ENST00000510774 FAM182BQ5T319 152 aa10.47□□□□□ -0.73
ATP2C1-219ENST00000510774 OR13H1Q8NG92 308 aa10.47□□□□□ -0.73
ATP2C1-219ENST00000510774 ABHD17AQ96GS6 310 aa10.47□□□□□ -0.73
ATP2C1-219ENST00000510774 NPHS2Q9NP85 383 aa10.47□□□□□ -0.73
ATP2C1-219ENST00000510774 MAP3K6O95382 1288 aa10.46□□□□□ -0.73
ATP2C1-219ENST00000510774 HOXD8P13378 290 aaPredicted RBP10.46□□□□□ -0.73
ATP2C1-219ENST00000510774 SNRPBP14678 240 aaKnown RBP10.46□□□□□ -0.73
ATP2C1-219ENST00000510774 SPEM2Q0P670 501 aa10.46□□□□□ -0.73
ATP2C1-219ENST00000510774 CRELD1Q96HD1 420 aa10.46□□□□□ -0.73
ATP2C1-219ENST00000510774 C12orf49Q9H741 205 aa10.46□□□□□ -0.73
ATP2C1-219ENST00000510774 NLRP2Q9NX02 1062 aa10.46□□□□□ -0.73
ATP2C1-219ENST00000510774 PHF24Q9UPV7 400 aa10.46□□□□□ -0.73
ATP2C1-219ENST00000510774 NCAPD3P42695 1498 aa10.46□□□□□ -0.74
ATP2C1-219ENST00000510774 MMP20O60882 483 aa10.45□□□□□ -0.74
ATP2C1-219ENST00000510774 RARAP10276 462 aa10.45□□□□□ -0.74
ATP2C1-219ENST00000510774 CES1P23141 567 aa10.45□□□□□ -0.74
ATP2C1-219ENST00000510774 EIF4BP23588 611 aaKnown RBP10.45□□□□□ -0.74
ATP2C1-219ENST00000510774 TARSP26639 723 aaKnown RBP10.45□□□□□ -0.74
ATP2C1-219ENST00000510774 IRS1P35568 1242 aa10.45□□□□□ -0.74
ATP2C1-219ENST00000510774 SOX18P35713 384 aa10.45□□□□□ -0.74
ATP2C1-219ENST00000510774 PI16Q6UXB8 463 aa10.45□□□□□ -0.74
ATP2C1-219ENST00000510774 EPS8L3Q8TE67 593 aaKnown RBP10.45□□□□□ -0.74
ATP2C1-219ENST00000510774 GTPBP3Q969Y2 492 aaKnown RBP10.45□□□□□ -0.74
ATP2C1-219ENST00000510774 METTL5Q9NRN9 209 aaKnown RBP10.45□□□□□ -0.74
ATP2C1-219ENST00000510774 ZFATQ9P243 1243 aa10.45□□□□□ -0.74
ATP2C1-219ENST00000510774 NFKB1P19838 968 aa10.44□□□□□ -0.74
ATP2C1-219ENST00000510774 KRT25Q7Z3Z0 450 aa10.44□□□□□ -0.74
ATP2C1-219ENST00000510774 PNMA5Q96PV4 448 aa10.44□□□□□ -0.74
ATP2C1-219ENST00000510774 SRCIN1Q9C0H9 1055 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms