RNA–Protein interactions for RNA: ENST00000510774.1

ATP2C1-219, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-219ENST00000510774 AEBP2Q6ZN18 517 aaPredicted RBP28.21■■■□□ 2.11
ATP2C1-219ENST00000510774 CHIC1Q5VXU3 224 aa28.17■■■□□ 2.1
ATP2C1-219ENST00000510774 PHF23Q9BUL5 403 aaPredicted RBP24.8■■□□□ 1.56
ATP2C1-219ENST00000510774 SENP3Q9H4L4 574 aaPredicted RBP23.86■■□□□ 1.41
ATP2C1-219ENST00000510774 PLPPR3Q6T4P5 718 aa23.13■■□□□ 1.29
ATP2C1-219ENST00000510774 FOXD1Q16676 465 aa22.04■■□□□ 1.12
ATP2C1-219ENST00000510774 PPP6R1Q9UPN7 881 aa21.66■■□□□ 1.06
ATP2C1-219ENST00000510774 ADRA2BP18089 450 aa21.65■■□□□ 1.06
ATP2C1-219ENST00000510774 PIAS4Q8N2W9 510 aaPredicted RBP20.92■□□□□ 0.94
ATP2C1-219ENST00000510774 KCNA4P22459 653 aa20.63■□□□□ 0.89
ATP2C1-219ENST00000510774 PPP4R3CPQ6ZMV5 832 aa20.43■□□□□ 0.86
ATP2C1-219ENST00000510774 MSH5O43196 834 aa20.12■□□□□ 0.81
ATP2C1-219ENST00000510774 NCBP3Q53F19 620 aaKnown RBP20.09■□□□□ 0.81
ATP2C1-219ENST00000510774 SCAF1Q9H7N4 1312 aaKnown RBP19.85■□□□□ 0.77
ATP2C1-219ENST00000510774 EHMT2Q96KQ7 1210 aa19.83■□□□□ 0.77
ATP2C1-219ENST00000510774 NPM3O75607 178 aaKnown RBP19.79■□□□□ 0.76
ATP2C1-219ENST00000510774 SLC4A1APQ9BWU0 796 aaKnown RBP19.76■□□□□ 0.75
ATP2C1-219ENST00000510774 CNKSR2Q8WXI2 1034 aa19.75■□□□□ 0.75
ATP2C1-219ENST00000510774 MAPK8IP2Q13387 824 aaPredicted RBP19.45■□□□□ 0.7
ATP2C1-219ENST00000510774 CSRNP3Q8WYN3 585 aa19.39■□□□□ 0.69
ATP2C1-219ENST00000510774 DNAJC5BQ9UF47 199 aa19.27■□□□□ 0.68
ATP2C1-219ENST00000510774 RNF216Q9NWF9 866 aaPredicted RBP19.24■□□□□ 0.67
ATP2C1-219ENST00000510774 DMRT2Q9Y5R5 561 aa19.15■□□□□ 0.66
ATP2C1-219ENST00000510774 HOXD11P31277 338 aaPredicted RBP19.02■□□□□ 0.64
ATP2C1-219ENST00000510774 ZBTB22O15209 634 aa19.01■□□□□ 0.63
ATP2C1-219ENST00000510774 FOXD4L1Q9NU39 408 aa18.86■□□□□ 0.61
ATP2C1-219ENST00000510774 SLC4A2P04920 1241 aa18.54■□□□□ 0.56
ATP2C1-219ENST00000510774 MYCNP04198 464 aaPredicted RBP18.3■□□□□ 0.52
ATP2C1-219ENST00000510774 ATXN8OSP0DMR3 200 aa18.18■□□□□ 0.5
ATP2C1-219ENST00000510774 DCAF8L1A6NGE4 600 aa18.16■□□□□ 0.5
ATP2C1-219ENST00000510774 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.02■□□□□ 0.48
ATP2C1-219ENST00000510774 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.86■□□□□ 0.45
ATP2C1-219ENST00000510774 HNRNPUL2Q1KMD3 747 aaKnown RBP17.86■□□□□ 0.45
ATP2C1-219ENST00000510774 U3KPZ7 1027 aaPredicted RBP17.86■□□□□ 0.45
ATP2C1-219ENST00000510774 SAMD1Q6SPF0 538 aaPredicted RBP17.81■□□□□ 0.44
ATP2C1-219ENST00000510774 ATF5Q9Y2D1 282 aaPredicted RBP17.71■□□□□ 0.43
ATP2C1-219ENST00000510774 APLP2Q06481 763 aa17.54■□□□□ 0.4
ATP2C1-219ENST00000510774 FKBP8Q14318 412 aa17.47■□□□□ 0.39
ATP2C1-219ENST00000510774 ZNF219Q9P2Y4 722 aaPredicted RBP17.38■□□□□ 0.37
ATP2C1-219ENST00000510774 RNF39Q9H2S5 420 aa17.3■□□□□ 0.36
ATP2C1-219ENST00000510774 POTEDQ86YR6 584 aa17.23■□□□□ 0.35
ATP2C1-219ENST00000510774 SPINK5Q9NQ38 1064 aaPredicted RBP17.14■□□□□ 0.33
ATP2C1-219ENST00000510774 C1QBPQ07021 282 aaKnown RBP17.13■□□□□ 0.33
ATP2C1-219ENST00000510774 TRHP20396 242 aaPredicted RBP17.08■□□□□ 0.32
ATP2C1-219ENST00000510774 AMER1Q5JTC6 1135 aaPredicted RBP17.03■□□□□ 0.32
ATP2C1-219ENST00000510774 CAPN15O75808 1086 aa17.02■□□□□ 0.32
ATP2C1-219ENST00000510774 MKRN4PQ13434 485 aaPredicted RBP17.01■□□□□ 0.31
ATP2C1-219ENST00000510774 POLA2Q14181 598 aa16.95■□□□□ 0.3
ATP2C1-219ENST00000510774 RTN4Q9NQC3 1192 aaKnown RBP16.95■□□□□ 0.3
ATP2C1-219ENST00000510774 FBLN2P98095 1184 aa16.94■□□□□ 0.3
ATP2C1-219ENST00000510774 SPDYE4A6NLX3 237 aa16.89■□□□□ 0.29
ATP2C1-219ENST00000510774 ZBTB12Q9Y330 459 aaPredicted RBP16.81■□□□□ 0.28
ATP2C1-219ENST00000510774 PROM2Q8N271 834 aa16.8■□□□□ 0.28
ATP2C1-219ENST00000510774 ABCB7O75027 752 aa16.74■□□□□ 0.27
ATP2C1-219ENST00000510774 FBXO3Q9UK99 471 aa16.71■□□□□ 0.27
ATP2C1-219ENST00000510774 DSG3P32926 999 aa16.65■□□□□ 0.26
ATP2C1-219ENST00000510774 VASPP50552 380 aaPredicted RBP16.48■□□□□ 0.23
ATP2C1-219ENST00000510774 SPDYE2BA6NHP3 402 aa16.39■□□□□ 0.21
ATP2C1-219ENST00000510774 SPDYE6P0CI01 402 aa16.39■□□□□ 0.21
ATP2C1-219ENST00000510774 SPDYE2Q495Y8 402 aa16.39■□□□□ 0.21
ATP2C1-219ENST00000510774 OSCARQ8IYS5 282 aa16.39■□□□□ 0.21
ATP2C1-219ENST00000510774 SSUH2Q9Y2M2 353 aa16.36■□□□□ 0.21
ATP2C1-219ENST00000510774 ZNF692Q9BU19 519 aaPredicted RBP16.35■□□□□ 0.21
ATP2C1-219ENST00000510774 CACNB1Q02641 598 aaPredicted RBP16.34■□□□□ 0.21
ATP2C1-219ENST00000510774 SLC24A1O60721 1099 aa16.32■□□□□ 0.2
ATP2C1-219ENST00000510774 IFNLR1Q8IU57 520 aaPredicted RBP16.27■□□□□ 0.2
ATP2C1-219ENST00000510774 STAG3Q9UJ98 1225 aa16.18■□□□□ 0.18
ATP2C1-219ENST00000510774 PABPN1Q86U42 306 aaKnown RBP eCLIP16.17■□□□□ 0.18
ATP2C1-219ENST00000510774 SPOCK2Q92563 424 aa16■□□□□ 0.15
ATP2C1-219ENST00000510774 PKD2Q13563 968 aa15.98■□□□□ 0.15
ATP2C1-219ENST00000510774 KLHL34Q8N239 644 aa15.97■□□□□ 0.15
ATP2C1-219ENST00000510774 PLCD3Q8N3E9 789 aa15.97■□□□□ 0.15
ATP2C1-219ENST00000510774 MIER1Q8N108 512 aa15.89■□□□□ 0.13
ATP2C1-219ENST00000510774 RBM42Q9BTD8 480 aaKnown RBP15.88■□□□□ 0.13
ATP2C1-219ENST00000510774 PLEKHG5O94827 1062 aa15.81■□□□□ 0.12
ATP2C1-219ENST00000510774 AKT1S1Q96B36 256 aa15.81■□□□□ 0.12
ATP2C1-219ENST00000510774 ZBTB47Q9UFB7 747 aaPredicted RBP15.81■□□□□ 0.12
ATP2C1-219ENST00000510774 DCAF8L2P0C7V8 631 aa15.75■□□□□ 0.11
ATP2C1-219ENST00000510774 ECM2O94769 699 aaPredicted RBP15.74■□□□□ 0.11
ATP2C1-219ENST00000510774 SPDYE1Q8NFV5 336 aaPredicted RBP15.74■□□□□ 0.11
ATP2C1-219ENST00000510774 PLCB2Q00722 1185 aa15.72■□□□□ 0.11
ATP2C1-219ENST00000510774 REM2Q8IYK8 340 aaPredicted RBP15.62■□□□□ 0.09
ATP2C1-219ENST00000510774 RGL2O15211 777 aa15.58■□□□□ 0.08
ATP2C1-219ENST00000510774 TRIM41Q8WV44 630 aa15.58■□□□□ 0.08
ATP2C1-219ENST00000510774 CIZ1Q9ULV3 898 aaPredicted RBP15.58■□□□□ 0.08
ATP2C1-219ENST00000510774 CLEC11AQ9Y240 323 aa15.56■□□□□ 0.08
ATP2C1-219ENST00000510774 PRR29P0C7W0 189 aa15.54■□□□□ 0.08
ATP2C1-219ENST00000510774 CREBZFQ9NS37 354 aa15.53■□□□□ 0.08
ATP2C1-219ENST00000510774 NUBP1P53384 320 aa15.51■□□□□ 0.07
ATP2C1-219ENST00000510774 BBXQ8WY36 941 aaPredicted RBP15.51■□□□□ 0.07
ATP2C1-219ENST00000510774 GSE1Q14687 1217 aa15.5■□□□□ 0.07
ATP2C1-219ENST00000510774 NPM1P06748 294 aaKnown RBP eCLIP15.47■□□□□ 0.07
ATP2C1-219ENST00000510774 MNX1P50219 401 aaPredicted RBP15.47■□□□□ 0.07
ATP2C1-219ENST00000510774 PITPNM1O00562 1244 aa15.44■□□□□ 0.06
ATP2C1-219ENST00000510774 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.44■□□□□ 0.06
ATP2C1-219ENST00000510774 HAP1P54257 671 aaPredicted RBP15.43■□□□□ 0.06
ATP2C1-219ENST00000510774 FAM212AQ96EL1 285 aa15.37■□□□□ 0.05
ATP2C1-219ENST00000510774 DCAF8Q5TAQ9 597 aa15.34■□□□□ 0.05
ATP2C1-219ENST00000510774 RNF25Q96BH1 459 aaPredicted RBP15.34■□□□□ 0.05
ATP2C1-219ENST00000510774 CHGAP10645 457 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms