RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 PPM1FP49593 454 aaPredicted RBP9.09□□□□□ -0.95
PDGFRA-206ENST00000508170 NCOA4Q13772 614 aa9.09□□□□□ -0.95
PDGFRA-206ENST00000508170 SPECC1Q5M775 1068 aa9.09□□□□□ -0.95
PDGFRA-206ENST00000508170 PRPF38BQ5VTL8 546 aaKnown RBP9.09□□□□□ -0.95
PDGFRA-206ENST00000508170 NELL1Q92832 810 aa9.09□□□□□ -0.95
PDGFRA-206ENST00000508170 TMEM87BQ96K49 555 aa9.09□□□□□ -0.95
PDGFRA-206ENST00000508170 PDGFDQ9GZP0 370 aaPredicted RBP9.09□□□□□ -0.95
PDGFRA-206ENST00000508170 RIC8AQ9NPQ8 531 aa9.09□□□□□ -0.95
PDGFRA-206ENST00000508170 CDV3Q9UKY7 258 aaKnown RBP9.09□□□□□ -0.95
PDGFRA-206ENST00000508170 TMCC3Q9ULS5 477 aa9.09□□□□□ -0.95
PDGFRA-206ENST00000508170 PPFIA3O75145 1194 aa9.08□□□□□ -0.96
PDGFRA-206ENST00000508170 IFIT2P09913 472 aaKnown RBP9.08□□□□□ -0.96
PDGFRA-206ENST00000508170 EPB42P16452 691 aa9.08□□□□□ -0.96
PDGFRA-206ENST00000508170 CNGA1P29973 690 aa9.08□□□□□ -0.96
PDGFRA-206ENST00000508170 PAK2Q13177 524 aa9.08□□□□□ -0.96
PDGFRA-206ENST00000508170 DSC3Q14574 896 aa9.08□□□□□ -0.96
PDGFRA-206ENST00000508170 UBE2Q1Q7Z7E8 422 aa9.08□□□□□ -0.96
PDGFRA-206ENST00000508170 PXYLP1Q8TE99 480 aa9.08□□□□□ -0.96
PDGFRA-206ENST00000508170 TRIM52Q96A61 297 aa9.08□□□□□ -0.96
PDGFRA-206ENST00000508170 ZNF594Q96JF6 807 aaPredicted RBP9.08□□□□□ -0.96
PDGFRA-206ENST00000508170 TRIM55Q9BYV6 548 aa9.08□□□□□ -0.96
PDGFRA-206ENST00000508170 PIP5K1CO60331 668 aa9.08□□□□□ -0.96
PDGFRA-206ENST00000508170 HSP90AA2PQ14568 343 aaPredicted RBP9.08□□□□□ -0.96
PDGFRA-206ENST00000508170 C16orf54Q6UWD8 224 aa9.08□□□□□ -0.96
PDGFRA-206ENST00000508170 ANKRD13BQ86YJ7 626 aa9.08□□□□□ -0.96
PDGFRA-206ENST00000508170 PAWRQ96IZ0 340 aaKnown RBP9.08□□□□□ -0.96
PDGFRA-206ENST00000508170 MPP4Q96JB8 637 aa9.08□□□□□ -0.96
PDGFRA-206ENST00000508170 SRRTQ9BXP5 876 aaKnown RBP9.08□□□□□ -0.96
PDGFRA-206ENST00000508170 C9orf78Q9NZ63 289 aaPredicted RBP9.08□□□□□ -0.96
PDGFRA-206ENST00000508170 KCNQ2O43526 872 aa9.07□□□□□ -0.96
PDGFRA-206ENST00000508170 CTSHP09668 335 aa9.07□□□□□ -0.96
PDGFRA-206ENST00000508170 GJA5P36382 358 aa9.07□□□□□ -0.96
PDGFRA-206ENST00000508170 ST13P50502 369 aaKnown RBP9.07□□□□□ -0.96
PDGFRA-206ENST00000508170 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.07□□□□□ -0.96
PDGFRA-206ENST00000508170 CCDC34Q96HJ3 373 aa9.07□□□□□ -0.96
PDGFRA-206ENST00000508170 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.07□□□□□ -0.96
PDGFRA-206ENST00000508170 FOXK1P85037 733 aa9.07□□□□□ -0.96
PDGFRA-206ENST00000508170 EHHADHQ08426 723 aa9.07□□□□□ -0.96
PDGFRA-206ENST00000508170 ALKBH2Q6NS38 261 aa9.07□□□□□ -0.96
PDGFRA-206ENST00000508170 ANKS3Q6ZW76 656 aa9.07□□□□□ -0.96
PDGFRA-206ENST00000508170 DDX42Q86XP3 938 aaKnown RBP eCLIP9.07□□□□□ -0.96
PDGFRA-206ENST00000508170 NUDT16Q96DE0 195 aaKnown RBP9.07□□□□□ -0.96
PDGFRA-206ENST00000508170 TMEM260Q9NX78 707 aa9.07□□□□□ -0.96
PDGFRA-206ENST00000508170 TMEM63CQ9P1W3 806 aa9.07□□□□□ -0.96
PDGFRA-206ENST00000508170 TRIM64CA6NLI5 447 aa9.06□□□□□ -0.96
PDGFRA-206ENST00000508170 GOLGA6L6A8MZA4 724 aa9.06□□□□□ -0.96
PDGFRA-206ENST00000508170 ATP5J2-PTCD1G3V325 749 aa9.06□□□□□ -0.96
PDGFRA-206ENST00000508170 KCNA2P16389 499 aa9.06□□□□□ -0.96
PDGFRA-206ENST00000508170 VARSP26640 1264 aaKnown RBP9.06□□□□□ -0.96
PDGFRA-206ENST00000508170 PIK3CAP42336 1068 aa9.06□□□□□ -0.96
PDGFRA-206ENST00000508170 SARSP49591 514 aaKnown RBP9.06□□□□□ -0.96
PDGFRA-206ENST00000508170 ZKSCAN8Q15776 578 aaPredicted RBP9.06□□□□□ -0.96
PDGFRA-206ENST00000508170 FAM133BQ5BKY9 247 aaKnown RBP9.06□□□□□ -0.96
PDGFRA-206ENST00000508170 CAPN12Q6ZSI9 719 aa9.06□□□□□ -0.96
PDGFRA-206ENST00000508170 C16orf86Q6ZW13 317 aa9.06□□□□□ -0.96
PDGFRA-206ENST00000508170 GPRASP2Q96D09 838 aa9.06□□□□□ -0.96
PDGFRA-206ENST00000508170 CRELD1Q96HD1 420 aa9.06□□□□□ -0.96
PDGFRA-206ENST00000508170 CENPOQ9BU64 300 aa9.06□□□□□ -0.96
PDGFRA-206ENST00000508170 MKNK1Q9BUB5 465 aa9.06□□□□□ -0.96
PDGFRA-206ENST00000508170 TSPYL2Q9H2G4 693 aaPredicted RBP9.06□□□□□ -0.96
PDGFRA-206ENST00000508170 OATP04181 439 aa9.05□□□□□ -0.96
PDGFRA-206ENST00000508170 SSBP05455 408 aaKnown RBP eCLIP9.05□□□□□ -0.96
PDGFRA-206ENST00000508170 NAT2P11245 290 aa9.05□□□□□ -0.96
PDGFRA-206ENST00000508170 RAB33AQ14088 237 aa9.05□□□□□ -0.96
PDGFRA-206ENST00000508170 LMBRD2Q68DH5 695 aaPredicted RBP9.05□□□□□ -0.96
PDGFRA-206ENST00000508170 LCA5Q86VQ0 697 aa9.05□□□□□ -0.96
PDGFRA-206ENST00000508170 PGBD4Q96DM1 585 aa9.05□□□□□ -0.96
PDGFRA-206ENST00000508170 FMNL2Q96PY5 1086 aa9.05□□□□□ -0.96
PDGFRA-206ENST00000508170 VAMP4O75379 141 aa9.05□□□□□ -0.96
PDGFRA-206ENST00000508170 F2P00734 622 aa9.05□□□□□ -0.96
PDGFRA-206ENST00000508170 NAT1P18440 290 aa9.05□□□□□ -0.96
PDGFRA-206ENST00000508170 MAP2K1Q02750 393 aaPredicted RBP9.05□□□□□ -0.96
PDGFRA-206ENST00000508170 NUCB1Q02818 461 aa9.05□□□□□ -0.96
PDGFRA-206ENST00000508170 SQSTM1Q13501 440 aa9.05□□□□□ -0.96
PDGFRA-206ENST00000508170 IL31Q6EBC2 164 aa9.05□□□□□ -0.96
PDGFRA-206ENST00000508170 PDXDC2PQ6P474 469 aa9.05□□□□□ -0.96
PDGFRA-206ENST00000508170 RASSF3Q86WH2 238 aa9.05□□□□□ -0.96
PDGFRA-206ENST00000508170 NUTM1Q86Y26 1132 aa9.05□□□□□ -0.96
PDGFRA-206ENST00000508170 CERKQ8TCT0 537 aa9.05□□□□□ -0.96
PDGFRA-206ENST00000508170 TRMT2BQ96GJ1 504 aaKnown RBP9.05□□□□□ -0.96
PDGFRA-206ENST00000508170 DNAJC7Q99615 494 aa9.05□□□□□ -0.96
PDGFRA-206ENST00000508170 NOD1Q9Y239 953 aa9.05□□□□□ -0.96
PDGFRA-206ENST00000508170 KLF4O43474 513 aa9.04□□□□□ -0.96
PDGFRA-206ENST00000508170 AKAP10O43572 662 aa9.04□□□□□ -0.96
PDGFRA-206ENST00000508170 NEK3P51956 506 aa9.04□□□□□ -0.96
PDGFRA-206ENST00000508170 CFAP161Q6P656 301 aa9.04□□□□□ -0.96
PDGFRA-206ENST00000508170 TRPM4Q8TD43 1214 aa9.04□□□□□ -0.96
PDGFRA-206ENST00000508170 SMC3Q9UQE7 1217 aa9.04□□□□□ -0.96
PDGFRA-206ENST00000508170 WASHC2CQ9Y4E1 1318 aa9.04□□□□□ -0.96
PDGFRA-206ENST00000508170 ETFBP38117 255 aa9.04□□□□□ -0.96
PDGFRA-206ENST00000508170 TNNT2P45379 298 aaPredicted RBP9.04□□□□□ -0.96
PDGFRA-206ENST00000508170 RC3H1Q5TC82 1133 aaKnown RBP9.04□□□□□ -0.96
PDGFRA-206ENST00000508170 PPP4R3AQ6IN85 833 aa9.04□□□□□ -0.96
PDGFRA-206ENST00000508170 JARID2Q92833 1246 aaPredicted RBP9.04□□□□□ -0.96
PDGFRA-206ENST00000508170 NELL2Q99435 816 aa9.04□□□□□ -0.96
PDGFRA-206ENST00000508170 PCDH10Q9P2E7 1040 aa9.04□□□□□ -0.96
PDGFRA-206ENST00000508170 A6NCN8 305 aa9.03□□□□□ -0.96
PDGFRA-206ENST00000508170 RHOBTB3O94955 611 aa9.03□□□□□ -0.96
PDGFRA-206ENST00000508170 FOSL1P15407 271 aa9.03□□□□□ -0.96
PDGFRA-206ENST00000508170 HALP42357 657 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms