RNA–Protein interactions for RNA: ENST00000508169.1

COL6A4P1-204, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 3

Gene COL6A4P1, Length 527 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-204ENST00000508169 PSMD2Q13200 908 aa10.91□□□□□ -0.66
COL6A4P1-204ENST00000508169 ZNF837Q96EG3 531 aaPredicted RBP10.91□□□□□ -0.66
COL6A4P1-204ENST00000508169 ZFYVE28Q9HCC9 887 aa10.91□□□□□ -0.66
COL6A4P1-204ENST00000508169 IGSF5Q9NSI5 407 aa10.91□□□□□ -0.66
COL6A4P1-204ENST00000508169 ABI2Q9NYB9 513 aaPredicted RBP10.91□□□□□ -0.66
COL6A4P1-204ENST00000508169 BNIP3LO60238 219 aa10.9□□□□□ -0.66
COL6A4P1-204ENST00000508169 CCINQ13939 588 aa10.9□□□□□ -0.66
COL6A4P1-204ENST00000508169 USPL1Q5W0Q7 1092 aa10.9□□□□□ -0.66
COL6A4P1-204ENST00000508169 NDFIP2Q9NV92 336 aa10.9□□□□□ -0.66
COL6A4P1-204ENST00000508169 SORBS3O60504 671 aa10.89□□□□□ -0.67
COL6A4P1-204ENST00000508169 SNRPBP14678 240 aaKnown RBP10.89□□□□□ -0.67
COL6A4P1-204ENST00000508169 GNA15P30679 374 aa10.89□□□□□ -0.67
COL6A4P1-204ENST00000508169 TSNAXIP1Q2TAA8 658 aa10.89□□□□□ -0.67
COL6A4P1-204ENST00000508169 TTC39BQ5VTQ0 682 aaPredicted RBP10.89□□□□□ -0.67
COL6A4P1-204ENST00000508169 CCDC74AQ96AQ1 378 aa10.89□□□□□ -0.67
COL6A4P1-204ENST00000508169 GSX2Q9BZM3 304 aa10.89□□□□□ -0.67
COL6A4P1-204ENST00000508169 STRN4Q9NRL3 753 aa10.89□□□□□ -0.67
COL6A4P1-204ENST00000508169 SASH3O75995 380 aa10.88□□□□□ -0.67
COL6A4P1-204ENST00000508169 KRT25Q7Z3Z0 450 aa10.88□□□□□ -0.67
COL6A4P1-204ENST00000508169 C1orf127Q8N9H9 656 aa10.88□□□□□ -0.67
COL6A4P1-204ENST00000508169 ABHD17AQ96GS6 310 aa10.88□□□□□ -0.67
COL6A4P1-204ENST00000508169 FRMD6Q96NE9 622 aa10.88□□□□□ -0.67
COL6A4P1-204ENST00000508169 CHRDQ9H2X0 955 aa10.88□□□□□ -0.67
COL6A4P1-204ENST00000508169 MARK1Q9P0L2 795 aa10.88□□□□□ -0.67
COL6A4P1-204ENST00000508169 CNTN3Q9P232 1028 aa10.88□□□□□ -0.67
COL6A4P1-204ENST00000508169 TCF3P15923 654 aa10.87□□□□□ -0.67
COL6A4P1-204ENST00000508169 Q6ZNB5 142 aa10.87□□□□□ -0.67
COL6A4P1-204ENST00000508169 GTPBP3Q969Y2 492 aaKnown RBP10.87□□□□□ -0.67
COL6A4P1-204ENST00000508169 PNMA5Q96PV4 448 aa10.87□□□□□ -0.67
COL6A4P1-204ENST00000508169 VTI1BQ9UEU0 232 aa10.87□□□□□ -0.67
COL6A4P1-204ENST00000508169 ATXN7L1Q9ULK2 861 aaPredicted RBP10.87□□□□□ -0.67
COL6A4P1-204ENST00000508169 SPG7Q9UQ90 795 aa10.87□□□□□ -0.67
COL6A4P1-204ENST00000508169 C11orf95C9JLR9 678 aaPredicted RBP10.86□□□□□ -0.67
COL6A4P1-204ENST00000508169 TARSP26639 723 aaKnown RBP10.86□□□□□ -0.67
COL6A4P1-204ENST00000508169 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.86□□□□□ -0.67
COL6A4P1-204ENST00000508169 PMEPA1Q969W9 287 aa10.86□□□□□ -0.67
COL6A4P1-204ENST00000508169 BACH2Q9BYV9 841 aa10.86□□□□□ -0.67
COL6A4P1-204ENST00000508169 PHF24Q9UPV7 400 aa10.86□□□□□ -0.67
COL6A4P1-204ENST00000508169 EREGO14944 169 aa10.85□□□□□ -0.67
COL6A4P1-204ENST00000508169 RARAP10276 462 aa10.85□□□□□ -0.67
COL6A4P1-204ENST00000508169 CD33P20138 364 aa10.85□□□□□ -0.67
COL6A4P1-204ENST00000508169 SPEM2Q0P670 501 aa10.85□□□□□ -0.67
COL6A4P1-204ENST00000508169 NLRP2Q9NX02 1062 aa10.85□□□□□ -0.67
COL6A4P1-204ENST00000508169 HCN2Q9UL51 889 aa10.85□□□□□ -0.67
COL6A4P1-204ENST00000508169 POLR3DP05423 398 aaPredicted RBP10.84□□□□□ -0.67
COL6A4P1-204ENST00000508169 NFKB1P19838 968 aa10.84□□□□□ -0.67
COL6A4P1-204ENST00000508169 CES1P23141 567 aa10.84□□□□□ -0.67
COL6A4P1-204ENST00000508169 IRS1P35568 1242 aa10.84□□□□□ -0.67
COL6A4P1-204ENST00000508169 GRIN2CQ14957 1233 aa10.84□□□□□ -0.67
COL6A4P1-204ENST00000508169 GALNT12Q8IXK2 581 aa10.84□□□□□ -0.67
COL6A4P1-204ENST00000508169 EPS8L3Q8TE67 593 aaKnown RBP10.84□□□□□ -0.67
COL6A4P1-204ENST00000508169 EFCC1Q9HA90 598 aa10.84□□□□□ -0.67
COL6A4P1-204ENST00000508169 NPHS2Q9NP85 383 aa10.84□□□□□ -0.67
COL6A4P1-204ENST00000508169 ZFATQ9P243 1243 aa10.84□□□□□ -0.67
COL6A4P1-204ENST00000508169 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.84□□□□□ -0.67
COL6A4P1-204ENST00000508169 AK5Q9Y6K8 562 aa10.84□□□□□ -0.67
COL6A4P1-204ENST00000508169 CDC14CA4D256 554 aa10.83□□□□□ -0.68
COL6A4P1-204ENST00000508169 MMP20O60882 483 aa10.83□□□□□ -0.68
COL6A4P1-204ENST00000508169 PPFIA3O75145 1194 aa10.83□□□□□ -0.68
COL6A4P1-204ENST00000508169 FGFR3P22607 806 aa10.83□□□□□ -0.68
COL6A4P1-204ENST00000508169 FOXR1Q6PIV2 292 aa10.83□□□□□ -0.68
COL6A4P1-204ENST00000508169 PI16Q6UXB8 463 aa10.83□□□□□ -0.68
COL6A4P1-204ENST00000508169 OR13H1Q8NG92 308 aa10.83□□□□□ -0.68
COL6A4P1-204ENST00000508169 TRERF1Q96PN7 1200 aa10.83□□□□□ -0.68
COL6A4P1-204ENST00000508169 SLC30A3Q99726 388 aa10.83□□□□□ -0.68
COL6A4P1-204ENST00000508169 PHF20L1A8MW92 1017 aa10.82□□□□□ -0.68
COL6A4P1-204ENST00000508169 CYP2E1P05181 493 aaPredicted RBP10.82□□□□□ -0.68
COL6A4P1-204ENST00000508169 GIPC1O14908 333 aa10.81□□□□□ -0.68
COL6A4P1-204ENST00000508169 EIF4BP23588 611 aaKnown RBP10.81□□□□□ -0.68
COL6A4P1-204ENST00000508169 VEGFBP49765 207 aa10.81□□□□□ -0.68
COL6A4P1-204ENST00000508169 FAM182BQ5T319 152 aa10.81□□□□□ -0.68
COL6A4P1-204ENST00000508169 RAB44Q7Z6P3 723 aaPredicted RBP10.81□□□□□ -0.68
COL6A4P1-204ENST00000508169 BHMTQ93088 406 aa10.81□□□□□ -0.68
COL6A4P1-204ENST00000508169 KANSL3Q9P2N6 904 aa10.81□□□□□ -0.68
COL6A4P1-204ENST00000508169 SCAMP3O14828 347 aaKnown RBP10.8□□□□□ -0.68
COL6A4P1-204ENST00000508169 PSAPP07602 524 aa10.8□□□□□ -0.68
COL6A4P1-204ENST00000508169 NEUROD1Q13562 356 aa10.8□□□□□ -0.68
COL6A4P1-204ENST00000508169 LDLRAD1Q5T700 205 aa10.8□□□□□ -0.68
COL6A4P1-204ENST00000508169 VWA5B2Q8N398 1253 aa10.8□□□□□ -0.68
COL6A4P1-204ENST00000508169 TMEM87AQ8NBN3 555 aa10.8□□□□□ -0.68
COL6A4P1-204ENST00000508169 C12orf49Q9H741 205 aa10.8□□□□□ -0.68
COL6A4P1-204ENST00000508169 GPR25O00155 361 aa10.79□□□□□ -0.68
COL6A4P1-204ENST00000508169 LCE2BO14633 110 aa10.79□□□□□ -0.68
COL6A4P1-204ENST00000508169 GADD45BO75293 160 aaPredicted RBP10.79□□□□□ -0.68
COL6A4P1-204ENST00000508169 MAP3K6O95382 1288 aa10.79□□□□□ -0.68
COL6A4P1-204ENST00000508169 EDN3P14138 238 aa10.79□□□□□ -0.68
COL6A4P1-204ENST00000508169 SV2AQ7L0J3 742 aa10.79□□□□□ -0.68
COL6A4P1-204ENST00000508169 TLR7Q9NYK1 1049 aaKnown RBP10.79□□□□□ -0.68
COL6A4P1-204ENST00000508169 SOX18P35713 384 aa10.78□□□□□ -0.68
COL6A4P1-204ENST00000508169 CRELD1Q96HD1 420 aa10.78□□□□□ -0.68
COL6A4P1-204ENST00000508169 OSBPL7Q9BZF2 842 aa10.78□□□□□ -0.68
COL6A4P1-204ENST00000508169 PLAURQ03405 335 aa10.77□□□□□ -0.69
COL6A4P1-204ENST00000508169 DHX32Q7L7V1 743 aaKnown RBP10.77□□□□□ -0.69
COL6A4P1-204ENST00000508169 NANOS1Q8WY41 292 aaKnown RBP10.77□□□□□ -0.69
COL6A4P1-204ENST00000508169 SRCIN1Q9C0H9 1055 aa10.77□□□□□ -0.69
COL6A4P1-204ENST00000508169 SUV39H2Q9H5I1 410 aa10.77□□□□□ -0.69
COL6A4P1-204ENST00000508169 SALL4Q9UJQ4 1053 aa10.77□□□□□ -0.69
COL6A4P1-204ENST00000508169 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.77□□□□□ -0.69
COL6A4P1-204ENST00000508169 HOXD8P13378 290 aaPredicted RBP10.76□□□□□ -0.69
COL6A4P1-204ENST00000508169 CTBSQ01459 385 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms