RNA–Protein interactions for RNA: ENST00000507458.2

SMN2-207, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 3

Gene SMN2, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-207ENST00000507458 ZNF417Q8TAU3 575 aa9.81□□□□□ -0.84
SMN2-207ENST00000507458 ZNF587Q96SQ5 575 aaPredicted RBP9.81□□□□□ -0.84
SMN2-207ENST00000507458 USTQ9Y2C2 406 aa9.81□□□□□ -0.84
SMN2-207ENST00000507458 PRRT3Q5FWE3 981 aa9.8□□□□□ -0.84
SMN2-207ENST00000507458 RTN1Q16799 776 aa9.79□□□□□ -0.84
SMN2-207ENST00000507458 BHMTQ93088 406 aa9.79□□□□□ -0.84
SMN2-207ENST00000507458 ARAP1Q96P48 1450 aa9.79□□□□□ -0.84
SMN2-207ENST00000507458 FURINP09958 794 aa9.78□□□□□ -0.84
SMN2-207ENST00000507458 IGFBP4P22692 258 aa9.78□□□□□ -0.84
SMN2-207ENST00000507458 IER5Q5VY09 327 aa9.78□□□□□ -0.84
SMN2-207ENST00000507458 PRDM6Q9NQX0 595 aa9.78□□□□□ -0.84
SMN2-207ENST00000507458 ZMIZ1Q9ULJ6 1067 aa9.78□□□□□ -0.84
SMN2-207ENST00000507458 FGD5Q6ZNL6 1462 aa9.78□□□□□ -0.84
SMN2-207ENST00000507458 ALBP02768 609 aa9.77□□□□□ -0.85
SMN2-207ENST00000507458 MICALL1Q8N3F8 863 aa9.77□□□□□ -0.85
SMN2-207ENST00000507458 EFCC1Q9HA90 598 aa9.77□□□□□ -0.85
SMN2-207ENST00000507458 STARD13Q9Y3M8 1113 aa9.77□□□□□ -0.85
SMN2-207ENST00000507458 TGFBR3LH3BV60 316 aa9.76□□□□□ -0.85
SMN2-207ENST00000507458 TBC1D8BQ0IIM8 1120 aa9.76□□□□□ -0.85
SMN2-207ENST00000507458 SNAPC4Q5SXM2 1469 aa9.76□□□□□ -0.85
SMN2-207ENST00000507458 CUX1P39880 1505 aa9.76□□□□□ -0.85
SMN2-207ENST00000507458 LGR5O75473 907 aa9.75□□□□□ -0.85
SMN2-207ENST00000507458 APBA3O96018 575 aa9.75□□□□□ -0.85
SMN2-207ENST00000507458 UBE2OQ9C0C9 1292 aaKnown RBP9.75□□□□□ -0.85
SMN2-207ENST00000507458 WDR97A6NE52 1622 aa9.74□□□□□ -0.85
SMN2-207ENST00000507458 GATA4P43694 442 aa9.74□□□□□ -0.85
SMN2-207ENST00000507458 B4GALNT3Q6L9W6 998 aa9.74□□□□□ -0.85
SMN2-207ENST00000507458 STK32AQ8WU08 396 aa9.74□□□□□ -0.85
SMN2-207ENST00000507458 PNMA5Q96PV4 448 aa9.74□□□□□ -0.85
SMN2-207ENST00000507458 IGFLR1Q9H665 355 aa9.74□□□□□ -0.85
SMN2-207ENST00000507458 GRIN2BQ13224 1484 aa9.73□□□□□ -0.85
SMN2-207ENST00000507458 MAGI1Q96QZ7 1491 aaPredicted RBP9.73□□□□□ -0.85
SMN2-207ENST00000507458 EPB42P16452 691 aa9.73□□□□□ -0.85
SMN2-207ENST00000507458 TRIM28Q13263 835 aaKnown RBP9.73□□□□□ -0.85
SMN2-207ENST00000507458 TMEM164Q5U3C3 297 aa9.73□□□□□ -0.85
SMN2-207ENST00000507458 C8orf86Q6ZUL3 223 aa9.73□□□□□ -0.85
SMN2-207ENST00000507458 CLP1Q92989 425 aaKnown RBP9.73□□□□□ -0.85
SMN2-207ENST00000507458 VTI1AQ96AJ9 217 aa9.73□□□□□ -0.85
SMN2-207ENST00000507458 CLASP1Q7Z460 1538 aa9.72□□□□□ -0.85
SMN2-207ENST00000507458 LILRB5O75023 590 aa9.72□□□□□ -0.85
SMN2-207ENST00000507458 CCINQ13939 588 aa9.72□□□□□ -0.85
SMN2-207ENST00000507458 COL9A3Q14050 684 aaPredicted RBP9.72□□□□□ -0.85
SMN2-207ENST00000507458 C20orf204Q6ZNR8 217 aa9.72□□□□□ -0.85
SMN2-207ENST00000507458 FOXO3O43524 673 aa9.71□□□□□ -0.86
SMN2-207ENST00000507458 NID1P14543 1247 aa9.71□□□□□ -0.86
SMN2-207ENST00000507458 NACC1Q96RE7 527 aa9.71□□□□□ -0.86
SMN2-207ENST00000507458 GSX2Q9BZM3 304 aa9.71□□□□□ -0.86
SMN2-207ENST00000507458 SLC6A14Q9UN76 642 aa9.71□□□□□ -0.86
SMN2-207ENST00000507458 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.71□□□□□ -0.86
SMN2-207ENST00000507458 SYNJ2O15056 1496 aa9.71□□□□□ -0.86
SMN2-207ENST00000507458 SYNJ1O43426 1573 aa9.71□□□□□ -0.86
SMN2-207ENST00000507458 FAM229AH3BQW9 127 aa9.7□□□□□ -0.86
SMN2-207ENST00000507458 FAM69CQ0P6D2 419 aa9.7□□□□□ -0.86
SMN2-207ENST00000507458 DOC2BQ14184 412 aa9.7□□□□□ -0.86
SMN2-207ENST00000507458 RETREG2Q8NC44 543 aa9.7□□□□□ -0.86
SMN2-207ENST00000507458 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.7□□□□□ -0.86
SMN2-207ENST00000507458 KLK14Q9P0G3 267 aa9.7□□□□□ -0.86
SMN2-207ENST00000507458 DMGDHQ9UI17 866 aaKnown RBP9.7□□□□□ -0.86
SMN2-207ENST00000507458 BCS1LQ9Y276 419 aa9.7□□□□□ -0.86
SMN2-207ENST00000507458 NFKB1P19838 968 aa9.69□□□□□ -0.86
SMN2-207ENST00000507458 WEE1P30291 646 aa9.69□□□□□ -0.86
SMN2-207ENST00000507458 DGKZQ13574 1117 aa9.69□□□□□ -0.86
SMN2-207ENST00000507458 GAPVD1Q14C86 1478 aa9.69□□□□□ -0.86
SMN2-207ENST00000507458 TRAPPC3LQ5T215 181 aa9.69□□□□□ -0.86
SMN2-207ENST00000507458 JPH1Q9HDC5 661 aaPredicted RBP9.69□□□□□ -0.86
SMN2-207ENST00000507458 DNAJB12Q9NXW2 375 aaKnown RBP9.69□□□□□ -0.86
SMN2-207ENST00000507458 TMEM88BA6NKF7 163 aa9.68□□□□□ -0.86
SMN2-207ENST00000507458 IDH3AP50213 366 aa9.68□□□□□ -0.86
SMN2-207ENST00000507458 ARSDP51689 593 aa9.67□□□□□ -0.86
SMN2-207ENST00000507458 PCSK7Q16549 785 aa9.67□□□□□ -0.86
SMN2-207ENST00000507458 NUDT8Q8WV74 236 aa9.67□□□□□ -0.86
SMN2-207ENST00000507458 PBRM1Q86U86 1689 aa9.67□□□□□ -0.86
SMN2-207ENST00000507458 INPP5BP32019 993 aa9.66□□□□□ -0.86
SMN2-207ENST00000507458 PSAPL1Q6NUJ1 521 aa9.66□□□□□ -0.86
SMN2-207ENST00000507458 HOMEZQ8IX15 550 aa9.66□□□□□ -0.86
SMN2-207ENST00000507458 QTRT2Q9H974 415 aaKnown RBP9.66□□□□□ -0.86
SMN2-207ENST00000507458 ABCA10Q8WWZ4 1543 aa9.66□□□□□ -0.86
SMN2-207ENST00000507458 ATP2B4P23634 1241 aa9.65□□□□□ -0.86
SMN2-207ENST00000507458 RAC1P63000 192 aa9.65□□□□□ -0.86
SMN2-207ENST00000507458 GRIK4Q16099 956 aa9.65□□□□□ -0.86
SMN2-207ENST00000507458 C11orf91Q3C1V1 193 aa9.65□□□□□ -0.86
SMN2-207ENST00000507458 COL26A1Q96A83 441 aa9.65□□□□□ -0.86
SMN2-207ENST00000507458 MYO19Q96H55 970 aa9.65□□□□□ -0.86
SMN2-207ENST00000507458 SEMA6BQ9H3T3 888 aa9.65□□□□□ -0.86
SMN2-207ENST00000507458 MTMR7Q9Y216 660 aa9.65□□□□□ -0.86
SMN2-207ENST00000507458 ABCA5Q8WWZ7 1642 aa9.64□□□□□ -0.87
SMN2-207ENST00000507458 PTCD1O75127 700 aaKnown RBP9.64□□□□□ -0.87
SMN2-207ENST00000507458 RGS9O75916 674 aaPredicted RBP9.64□□□□□ -0.87
SMN2-207ENST00000507458 MICAL2O94851 1124 aa9.64□□□□□ -0.87
SMN2-207ENST00000507458 MAP3K6O95382 1288 aa9.64□□□□□ -0.87
SMN2-207ENST00000507458 OCLNQ16625 522 aa9.64□□□□□ -0.87
SMN2-207ENST00000507458 C11orf16Q9NQ32 467 aa9.64□□□□□ -0.87
SMN2-207ENST00000507458 CXXC1Q9P0U4 656 aaPredicted RBP9.64□□□□□ -0.87
SMN2-207ENST00000507458 NAGPAQ9UK23 515 aa9.64□□□□□ -0.87
SMN2-207ENST00000507458 PRMT3O60678 531 aa9.63□□□□□ -0.87
SMN2-207ENST00000507458 KRT25Q7Z3Z0 450 aa9.63□□□□□ -0.87
SMN2-207ENST00000507458 FAM35AQ86V20 835 aa9.63□□□□□ -0.87
SMN2-207ENST00000507458 A0A0A0MRY4 1105 aa9.62□□□□□ -0.87
SMN2-207ENST00000507458 C9orf172C9J069 976 aa9.62□□□□□ -0.87
SMN2-207ENST00000507458 ELNP15502 786 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms