RNA–Protein interactions for RNA: ENST00000507458.2

SMN2-207, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 3

Gene SMN2, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-207ENST00000507458 AEBP2Q6ZN18 517 aaPredicted RBP31.08■■■□□ 2.57
SMN2-207ENST00000507458 CHIC1Q5VXU3 224 aa29.82■■■□□ 2.36
SMN2-207ENST00000507458 SENP3Q9H4L4 574 aaPredicted RBP26.57■■□□□ 1.84
SMN2-207ENST00000507458 PHF23Q9BUL5 403 aaPredicted RBP26.22■■□□□ 1.79
SMN2-207ENST00000507458 FOXD1Q16676 465 aa24.67■■□□□ 1.54
SMN2-207ENST00000507458 PLPPR3Q6T4P5 718 aa23.99■■□□□ 1.43
SMN2-207ENST00000507458 PPP6R1Q9UPN7 881 aa23.23■■□□□ 1.31
SMN2-207ENST00000507458 ADRA2BP18089 450 aa23.2■■□□□ 1.3
SMN2-207ENST00000507458 PIAS4Q8N2W9 510 aaPredicted RBP23.17■■□□□ 1.3
SMN2-207ENST00000507458 MSH5O43196 834 aa23.06■■□□□ 1.28
SMN2-207ENST00000507458 POTEDQ86YR6 584 aa22.01■■□□□ 1.11
SMN2-207ENST00000507458 SCAF1Q9H7N4 1312 aaKnown RBP21.33■■□□□ 1.01
SMN2-207ENST00000507458 MAPK8IP2Q13387 824 aaPredicted RBP21.22■□□□□ 0.99
SMN2-207ENST00000507458 DMRT2Q9Y5R5 561 aa21.07■□□□□ 0.96
SMN2-207ENST00000507458 PPP4R3CPQ6ZMV5 832 aa21.03■□□□□ 0.96
SMN2-207ENST00000507458 CNKSR2Q8WXI2 1034 aa20.6■□□□□ 0.89
SMN2-207ENST00000507458 HOXD11P31277 338 aaPredicted RBP20.4■□□□□ 0.86
SMN2-207ENST00000507458 NCBP3Q53F19 620 aaKnown RBP20.37■□□□□ 0.85
SMN2-207ENST00000507458 RNF216Q9NWF9 866 aaPredicted RBP20.34■□□□□ 0.85
SMN2-207ENST00000507458 DCAF8L1A6NGE4 600 aa20.25■□□□□ 0.83
SMN2-207ENST00000507458 NPM3O75607 178 aaKnown RBP19.99■□□□□ 0.79
SMN2-207ENST00000507458 KCNA4P22459 653 aa19.83■□□□□ 0.77
SMN2-207ENST00000507458 DNAJC5BQ9UF47 199 aa19.67■□□□□ 0.74
SMN2-207ENST00000507458 RNF39Q9H2S5 420 aa19.66■□□□□ 0.74
SMN2-207ENST00000507458 CACNB1Q02641 598 aaPredicted RBP19.63■□□□□ 0.73
SMN2-207ENST00000507458 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.49■□□□□ 0.71
SMN2-207ENST00000507458 C1QBPQ07021 282 aaKnown RBP19.42■□□□□ 0.7
SMN2-207ENST00000507458 U3KPZ7 1027 aaPredicted RBP19.05■□□□□ 0.64
SMN2-207ENST00000507458 SLC4A2P04920 1241 aa19■□□□□ 0.63
SMN2-207ENST00000507458 SLC4A1APQ9BWU0 796 aaKnown RBP18.82■□□□□ 0.6
SMN2-207ENST00000507458 CAPN15O75808 1086 aa18.71■□□□□ 0.59
SMN2-207ENST00000507458 SPINK5Q9NQ38 1064 aaPredicted RBP18.7■□□□□ 0.58
SMN2-207ENST00000507458 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.69■□□□□ 0.58
SMN2-207ENST00000507458 HNRNPUL2Q1KMD3 747 aaKnown RBP18.69■□□□□ 0.58
SMN2-207ENST00000507458 APLP2Q06481 763 aa18.66■□□□□ 0.58
SMN2-207ENST00000507458 SAMD1Q6SPF0 538 aaPredicted RBP18.58■□□□□ 0.56
SMN2-207ENST00000507458 MYCNP04198 464 aaPredicted RBP18.53■□□□□ 0.56
SMN2-207ENST00000507458 DSG3P32926 999 aa18.48■□□□□ 0.55
SMN2-207ENST00000507458 FOXD4L1Q9NU39 408 aa18.47■□□□□ 0.55
SMN2-207ENST00000507458 TRHP20396 242 aaPredicted RBP18.46■□□□□ 0.55
SMN2-207ENST00000507458 ZNF219Q9P2Y4 722 aaPredicted RBP18.46■□□□□ 0.55
SMN2-207ENST00000507458 ABCB7O75027 752 aa18.27■□□□□ 0.52
SMN2-207ENST00000507458 ZBTB22O15209 634 aa18.21■□□□□ 0.51
SMN2-207ENST00000507458 POLA2Q14181 598 aa18.01■□□□□ 0.47
SMN2-207ENST00000507458 ATF5Q9Y2D1 282 aaPredicted RBP18■□□□□ 0.47
SMN2-207ENST00000507458 ATXN8OSP0DMR3 200 aa17.89■□□□□ 0.45
SMN2-207ENST00000507458 RBM42Q9BTD8 480 aaKnown RBP17.72■□□□□ 0.43
SMN2-207ENST00000507458 ZBTB12Q9Y330 459 aaPredicted RBP17.72■□□□□ 0.43
SMN2-207ENST00000507458 CSRNP3Q8WYN3 585 aa17.62■□□□□ 0.41
SMN2-207ENST00000507458 EHMT2Q96KQ7 1210 aa17.58■□□□□ 0.4
SMN2-207ENST00000507458 OSCARQ8IYS5 282 aa17.42■□□□□ 0.38
SMN2-207ENST00000507458 FBLN2P98095 1184 aa17.4■□□□□ 0.38
SMN2-207ENST00000507458 POTEHQ6S545 545 aa17.32■□□□□ 0.36
SMN2-207ENST00000507458 AKT1S1Q96B36 256 aa17.32■□□□□ 0.36
SMN2-207ENST00000507458 MKRN4PQ13434 485 aaPredicted RBP17.2■□□□□ 0.34
SMN2-207ENST00000507458 CHRDL2Q6WN34 429 aa17.18■□□□□ 0.34
SMN2-207ENST00000507458 SPDYE2BA6NHP3 402 aa17.17■□□□□ 0.34
SMN2-207ENST00000507458 SPDYE6P0CI01 402 aa17.17■□□□□ 0.34
SMN2-207ENST00000507458 SPDYE2Q495Y8 402 aa17.17■□□□□ 0.34
SMN2-207ENST00000507458 REM2Q8IYK8 340 aaPredicted RBP17.14■□□□□ 0.33
SMN2-207ENST00000507458 ZNF692Q9BU19 519 aaPredicted RBP17■□□□□ 0.31
SMN2-207ENST00000507458 PITPNM1O00562 1244 aa16.95■□□□□ 0.3
SMN2-207ENST00000507458 SSUH2Q9Y2M2 353 aa16.93■□□□□ 0.3
SMN2-207ENST00000507458 SPDYE1Q8NFV5 336 aaPredicted RBP16.81■□□□□ 0.28
SMN2-207ENST00000507458 PIP4P2Q8N4L2 257 aa16.8■□□□□ 0.28
SMN2-207ENST00000507458 CLEC11AQ9Y240 323 aa16.77■□□□□ 0.28
SMN2-207ENST00000507458 PABPN1Q86U42 306 aaKnown RBP eCLIP16.75■□□□□ 0.27
SMN2-207ENST00000507458 FXR2P51116 673 aaKnown RBP eCLIP16.74■□□□□ 0.27
SMN2-207ENST00000507458 SPDYE4A6NLX3 237 aa16.58■□□□□ 0.24
SMN2-207ENST00000507458 PRR29P0C7W0 189 aa16.53■□□□□ 0.24
SMN2-207ENST00000507458 PRKAR2AP13861 404 aaKnown RBP16.53■□□□□ 0.24
SMN2-207ENST00000507458 HAX1O00165 279 aa16.47■□□□□ 0.23
SMN2-207ENST00000507458 STAG3Q9UJ98 1225 aa16.39■□□□□ 0.21
SMN2-207ENST00000507458 CHADLQ6NUI6 762 aa16.38■□□□□ 0.21
SMN2-207ENST00000507458 SP7Q8TDD2 431 aaPredicted RBP16.36■□□□□ 0.21
SMN2-207ENST00000507458 C19orf67A6NJJ6 358 aa16.2■□□□□ 0.18
SMN2-207ENST00000507458 EVX2Q03828 476 aa16.19■□□□□ 0.18
SMN2-207ENST00000507458 FARP1Q9Y4F1 1045 aaPredicted RBP16.18■□□□□ 0.18
SMN2-207ENST00000507458 PROM2Q8N271 834 aa16.17■□□□□ 0.18
SMN2-207ENST00000507458 CREBZFQ9NS37 354 aa16.12■□□□□ 0.17
SMN2-207ENST00000507458 CD44P16070 742 aaKnown RBP16.03■□□□□ 0.16
SMN2-207ENST00000507458 FKBP8Q14318 412 aa16.01■□□□□ 0.15
SMN2-207ENST00000507458 NPM1P06748 294 aaKnown RBP eCLIP15.92■□□□□ 0.14
SMN2-207ENST00000507458 GABBR2O75899 941 aa15.9■□□□□ 0.14
SMN2-207ENST00000507458 MNX1P50219 401 aaPredicted RBP15.86■□□□□ 0.13
SMN2-207ENST00000507458 ZRANB1Q9UGI0 708 aa15.85■□□□□ 0.13
SMN2-207ENST00000507458 PAK3O75914 559 aaPredicted RBP15.84■□□□□ 0.13
SMN2-207ENST00000507458 PLEKHG5O94827 1062 aa15.84■□□□□ 0.13
SMN2-207ENST00000507458 MIER1Q8N108 512 aa15.81■□□□□ 0.12
SMN2-207ENST00000507458 CLCN6P51797 869 aa15.8■□□□□ 0.12
SMN2-207ENST00000507458 ZNF579Q8NAF0 562 aaKnown RBP15.79■□□□□ 0.12
SMN2-207ENST00000507458 PLCD3Q8N3E9 789 aa15.74■□□□□ 0.11
SMN2-207ENST00000507458 FBXO3Q9UK99 471 aa15.66■□□□□ 0.1
SMN2-207ENST00000507458 PHF12Q96QT6 1004 aa15.63■□□□□ 0.09
SMN2-207ENST00000507458 ZBTB47Q9UFB7 747 aaPredicted RBP15.63■□□□□ 0.09
SMN2-207ENST00000507458 TSPYL2Q9H2G4 693 aaPredicted RBP15.6■□□□□ 0.09
SMN2-207ENST00000507458 DCBLD2Q96PD2 775 aa15.58■□□□□ 0.08
SMN2-207ENST00000507458 GALR2O43603 387 aaPredicted RBP15.55■□□□□ 0.08
SMN2-207ENST00000507458 POTEIP0CG38 1075 aa15.51■□□□□ 0.07
SMN2-207ENST00000507458 RASEFQ8IZ41 740 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms