RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 ZNF280CQ8ND82 737 aa5.02□□□□□ -1.61
TRAPPC11-205ENST00000506426 CFHR5Q9BXR6 569 aa5.02□□□□□ -1.61
TRAPPC11-205ENST00000506426 DMGDHQ9UI17 866 aaKnown RBP5.02□□□□□ -1.61
TRAPPC11-205ENST00000506426 A6NHS1 94 aa5.01□□□□□ -1.61
TRAPPC11-205ENST00000506426 TTLL8A6PVC2 850 aa5.01□□□□□ -1.61
TRAPPC11-205ENST00000506426 GIPC1O14908 333 aa5.01□□□□□ -1.61
TRAPPC11-205ENST00000506426 EIF4BP23588 611 aaKnown RBP5.01□□□□□ -1.61
TRAPPC11-205ENST00000506426 SF3A1Q15459 793 aaKnown RBP5.01□□□□□ -1.61
TRAPPC11-205ENST00000506426 ARSJQ5FYB0 599 aaPredicted RBP5.01□□□□□ -1.61
TRAPPC11-205ENST00000506426 PDE12Q6L8Q7 609 aaKnown RBP5.01□□□□□ -1.61
TRAPPC11-205ENST00000506426 LYSMD3Q7Z3D4 306 aa5.01□□□□□ -1.61
TRAPPC11-205ENST00000506426 BTLAQ7Z6A9 289 aa5.01□□□□□ -1.61
TRAPPC11-205ENST00000506426 NT5DC4Q86YG4 428 aa5.01□□□□□ -1.61
TRAPPC11-205ENST00000506426 CMTR1Q8N1G2 835 aaKnown RBP5.01□□□□□ -1.61
TRAPPC11-205ENST00000506426 CCDC155Q8N6L0 562 aa5.01□□□□□ -1.61
TRAPPC11-205ENST00000506426 HSH2DQ96JZ2 352 aa5.01□□□□□ -1.61
TRAPPC11-205ENST00000506426 ZIC5Q96T25 663 aa5.01□□□□□ -1.61
TRAPPC11-205ENST00000506426 TIMMDC1Q9NPL8 285 aa5.01□□□□□ -1.61
TRAPPC11-205ENST00000506426 RTCBQ9Y3I0 505 aaKnown RBP5.01□□□□□ -1.61
TRAPPC11-205ENST00000506426 A0A1B0GTH6 734 aa5□□□□□ -1.61
TRAPPC11-205ENST00000506426 UBAP1LF5GYI3 381 aa5□□□□□ -1.61
TRAPPC11-205ENST00000506426 TNFRSF21O75509 655 aa5□□□□□ -1.61
TRAPPC11-205ENST00000506426 EPB42P16452 691 aa5□□□□□ -1.61
TRAPPC11-205ENST00000506426 INPP5BP32019 993 aa5□□□□□ -1.61
TRAPPC11-205ENST00000506426 FANCCQ00597 558 aa5□□□□□ -1.61
TRAPPC11-205ENST00000506426 LRRC69Q6ZNQ3 347 aa5□□□□□ -1.61
TRAPPC11-205ENST00000506426 ZNF438Q7Z4V0 828 aa5□□□□□ -1.61
TRAPPC11-205ENST00000506426 METTL16Q86W50 562 aaKnown RBP5□□□□□ -1.61
TRAPPC11-205ENST00000506426 RNF217Q8TC41 542 aa5□□□□□ -1.61
TRAPPC11-205ENST00000506426 SNX29Q8TEQ0 813 aa5□□□□□ -1.61
TRAPPC11-205ENST00000506426 NLRP2Q9NX02 1062 aa5□□□□□ -1.61
TRAPPC11-205ENST00000506426 GJA3Q9Y6H8 435 aa5□□□□□ -1.61
TRAPPC11-205ENST00000506426 CDC14CA4D256 554 aa4.99□□□□□ -1.61
TRAPPC11-205ENST00000506426 PHACTR2O75167 634 aa4.99□□□□□ -1.61
TRAPPC11-205ENST00000506426 ATP4AP20648 1035 aa4.99□□□□□ -1.61
TRAPPC11-205ENST00000506426 MSX1P28360 303 aa4.99□□□□□ -1.61
TRAPPC11-205ENST00000506426 RAD51AP2Q09MP3 1159 aa4.99□□□□□ -1.61
TRAPPC11-205ENST00000506426 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.99□□□□□ -1.61
TRAPPC11-205ENST00000506426 CCDC74AQ96AQ1 378 aa4.99□□□□□ -1.61
TRAPPC11-205ENST00000506426 KLRG1Q96E93 195 aa4.99□□□□□ -1.61
TRAPPC11-205ENST00000506426 CRELD1Q96HD1 420 aa4.99□□□□□ -1.61
TRAPPC11-205ENST00000506426 TGIF2Q9GZN2 237 aa4.99□□□□□ -1.61
TRAPPC11-205ENST00000506426 CCSER2Q9H7U1 834 aa4.99□□□□□ -1.61
TRAPPC11-205ENST00000506426 ELP3Q9H9T3 547 aa4.99□□□□□ -1.61
TRAPPC11-205ENST00000506426 ZFYVE28Q9HCC9 887 aa4.99□□□□□ -1.61
TRAPPC11-205ENST00000506426 PPP1R1BQ9UD71 204 aaPredicted RBP4.99□□□□□ -1.61
TRAPPC11-205ENST00000506426 FOXD3Q9UJU5 478 aaPredicted RBP4.99□□□□□ -1.61
TRAPPC11-205ENST00000506426 USP20Q9Y2K6 914 aa4.99□□□□□ -1.61
TRAPPC11-205ENST00000506426 A0A1W2PNR3 127 aa4.98□□□□□ -1.61
TRAPPC11-205ENST00000506426 RNF225M0QZC1 329 aaPredicted RBP4.98□□□□□ -1.61
TRAPPC11-205ENST00000506426 ITGB2P05107 769 aa4.98□□□□□ -1.61
TRAPPC11-205ENST00000506426 SLURP2P0DP57 97 aa4.98□□□□□ -1.61
TRAPPC11-205ENST00000506426 RHOQP17081 205 aa4.98□□□□□ -1.61
TRAPPC11-205ENST00000506426 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.98□□□□□ -1.61
TRAPPC11-205ENST00000506426 LYPD4Q6UWN0 246 aa4.98□□□□□ -1.61
TRAPPC11-205ENST00000506426 UBXN4Q92575 508 aa4.98□□□□□ -1.61
TRAPPC11-205ENST00000506426 CEP63Q96MT8 703 aa4.98□□□□□ -1.61
TRAPPC11-205ENST00000506426 C12orf49Q9H741 205 aa4.98□□□□□ -1.61
TRAPPC11-205ENST00000506426 C11orf16Q9NQ32 467 aa4.98□□□□□ -1.61
TRAPPC11-205ENST00000506426 KCNMB2Q9Y691 235 aa4.98□□□□□ -1.61
TRAPPC11-205ENST00000506426 CTSHP09668 335 aa4.97□□□□□ -1.61
TRAPPC11-205ENST00000506426 GNL2Q13823 731 aaKnown RBP4.97□□□□□ -1.61
TRAPPC11-205ENST00000506426 TRIP4Q15650 581 aaPredicted RBP4.97□□□□□ -1.61
TRAPPC11-205ENST00000506426 USPL1Q5W0Q7 1092 aa4.97□□□□□ -1.61
TRAPPC11-205ENST00000506426 PGBD3Q8N328 593 aa4.97□□□□□ -1.61
TRAPPC11-205ENST00000506426 EPS8L3Q8TE67 593 aaKnown RBP4.97□□□□□ -1.61
TRAPPC11-205ENST00000506426 NANOS1Q8WY41 292 aaKnown RBP4.97□□□□□ -1.61
TRAPPC11-205ENST00000506426 PMEPA1Q969W9 287 aa4.97□□□□□ -1.61
TRAPPC11-205ENST00000506426 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.97□□□□□ -1.61
TRAPPC11-205ENST00000506426 SLC35F4A4IF30 521 aa4.96□□□□□ -1.62
TRAPPC11-205ENST00000506426 XYLBO75191 536 aa4.96□□□□□ -1.62
TRAPPC11-205ENST00000506426 F11P03951 625 aa4.96□□□□□ -1.62
TRAPPC11-205ENST00000506426 ITGA6P23229 1130 aa4.96□□□□□ -1.62
TRAPPC11-205ENST00000506426 TYRO3Q06418 890 aa4.96□□□□□ -1.62
TRAPPC11-205ENST00000506426 TTC39BQ5VTQ0 682 aaPredicted RBP4.96□□□□□ -1.62
TRAPPC11-205ENST00000506426 NLRP13Q86W25 1043 aa4.96□□□□□ -1.62
TRAPPC11-205ENST00000506426 NLRP8Q86W28 1048 aa4.96□□□□□ -1.62
TRAPPC11-205ENST00000506426 SLC43A3Q8NBI5 491 aa4.96□□□□□ -1.62
TRAPPC11-205ENST00000506426 OSBPL7Q9BZF2 842 aa4.96□□□□□ -1.62
TRAPPC11-205ENST00000506426 SRCIN1Q9C0H9 1055 aa4.96□□□□□ -1.62
TRAPPC11-205ENST00000506426 CRISPLD1Q9H336 500 aa4.96□□□□□ -1.62
TRAPPC11-205ENST00000506426 CAPN10Q9HC96 672 aa4.96□□□□□ -1.62
TRAPPC11-205ENST00000506426 PPP4R2Q9NY27 417 aa4.96□□□□□ -1.62
TRAPPC11-205ENST00000506426 TMEM63CQ9P1W3 806 aa4.96□□□□□ -1.62
TRAPPC11-205ENST00000506426 FAM8A1Q9UBU6 413 aa4.96□□□□□ -1.62
TRAPPC11-205ENST00000506426 CNTNAP5Q8WYK1 1306 aa4.96□□□□□ -1.62
TRAPPC11-205ENST00000506426 USP31Q70CQ4 1352 aa4.95□□□□□ -1.62
TRAPPC11-205ENST00000506426 GADD45BO75293 160 aaPredicted RBP4.95□□□□□ -1.62
TRAPPC11-205ENST00000506426 ADAMTS2O95450 1211 aa4.95□□□□□ -1.62
TRAPPC11-205ENST00000506426 EGFRP00533 1210 aa4.95□□□□□ -1.62
TRAPPC11-205ENST00000506426 POLR3DP05423 398 aaPredicted RBP4.95□□□□□ -1.62
TRAPPC11-205ENST00000506426 TAF1CQ15572 869 aaPredicted RBP4.95□□□□□ -1.62
TRAPPC11-205ENST00000506426 PI16Q6UXB8 463 aa4.95□□□□□ -1.62
TRAPPC11-205ENST00000506426 HS2ST1Q7LGA3 356 aa4.95□□□□□ -1.62
TRAPPC11-205ENST00000506426 GALNT12Q8IXK2 581 aa4.95□□□□□ -1.62
TRAPPC11-205ENST00000506426 ZNF654Q8IZM8 581 aa4.95□□□□□ -1.62
TRAPPC11-205ENST00000506426 C1orf127Q8N9H9 656 aa4.95□□□□□ -1.62
TRAPPC11-205ENST00000506426 TANGO6Q9C0B7 1094 aa4.95□□□□□ -1.62
TRAPPC11-205ENST00000506426 RUBCNLQ9H714 662 aa4.95□□□□□ -1.62
TRAPPC11-205ENST00000506426 GPAMQ9HCL2 828 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms