RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 WASHC5Q12768 1159 aa8.73□□□□□ -1.01
CDH9-202ENST00000505020 FAM83BQ5T0W9 1011 aa8.73□□□□□ -1.01
CDH9-202ENST00000505020 NBPF10Q6P3W6 841 aaKnown RBP8.73□□□□□ -1.01
CDH9-202ENST00000505020 ODF2LQ9ULJ1 636 aa8.73□□□□□ -1.01
CDH9-202ENST00000505020 SLC4A3P48751 1232 aa8.73□□□□□ -1.01
CDH9-202ENST00000505020 KRT26Q7Z3Y9 468 aa8.73□□□□□ -1.01
CDH9-202ENST00000505020 HOMER1Q86YM7 354 aa8.73□□□□□ -1.01
CDH9-202ENST00000505020 CPXCR1Q8N123 301 aa8.73□□□□□ -1.01
CDH9-202ENST00000505020 NDUFAF2Q8N183 169 aa8.73□□□□□ -1.01
CDH9-202ENST00000505020 HELQQ8TDG4 1101 aa8.73□□□□□ -1.01
CDH9-202ENST00000505020 ZNF408Q9H9D4 720 aa8.73□□□□□ -1.01
CDH9-202ENST00000505020 NGRNQ9NPE2 291 aaKnown RBP8.73□□□□□ -1.01
CDH9-202ENST00000505020 SPG7Q9UQ90 795 aa8.73□□□□□ -1.01
CDH9-202ENST00000505020 DAAM1Q9Y4D1 1078 aa8.73□□□□□ -1.01
CDH9-202ENST00000505020 SETD1BQ9UPS6 1966 aaKnown RBP8.72□□□□□ -1.01
CDH9-202ENST00000505020 KIF3CO14782 793 aa8.72□□□□□ -1.01
CDH9-202ENST00000505020 FIBPO43427 364 aa8.72□□□□□ -1.01
CDH9-202ENST00000505020 GUCA2AQ02747 115 aa8.72□□□□□ -1.01
CDH9-202ENST00000505020 MCL1Q07820 350 aa8.72□□□□□ -1.01
CDH9-202ENST00000505020 NFX1Q12986 1120 aaKnown RBP8.72□□□□□ -1.01
CDH9-202ENST00000505020 TAF11Q15544 211 aa8.72□□□□□ -1.01
CDH9-202ENST00000505020 DPY19L2Q6NUT2 758 aa8.72□□□□□ -1.01
CDH9-202ENST00000505020 ANKRD13DQ6ZTN6 518 aa8.72□□□□□ -1.01
CDH9-202ENST00000505020 LMNTD2Q8IXW0 634 aa8.72□□□□□ -1.01
CDH9-202ENST00000505020 LILRB2Q8N423 598 aa8.72□□□□□ -1.01
CDH9-202ENST00000505020 PPHLN1Q8NEY8 458 aaKnown RBP8.72□□□□□ -1.01
CDH9-202ENST00000505020 GPR101Q96P66 508 aaPredicted RBP8.72□□□□□ -1.01
CDH9-202ENST00000505020 FAM13BQ9NYF5 915 aa8.72□□□□□ -1.01
CDH9-202ENST00000505020 CDV3Q9UKY7 258 aaKnown RBP8.72□□□□□ -1.01
CDH9-202ENST00000505020 GTF2A1LQ9UNN4 478 aa8.72□□□□□ -1.01
CDH9-202ENST00000505020 PABPN1LA6NDY0 278 aaKnown RBP8.71□□□□□ -1.01
CDH9-202ENST00000505020 POU3F3P20264 500 aaPredicted RBP8.71□□□□□ -1.01
CDH9-202ENST00000505020 ZBED6P86452 979 aa8.71□□□□□ -1.01
CDH9-202ENST00000505020 SEPT2Q15019 361 aa8.71□□□□□ -1.01
CDH9-202ENST00000505020 ANO1Q5XXA6 986 aa8.71□□□□□ -1.01
CDH9-202ENST00000505020 FRS2Q8WU20 508 aa8.71□□□□□ -1.01
CDH9-202ENST00000505020 PRKD2Q9BZL6 878 aa8.71□□□□□ -1.01
CDH9-202ENST00000505020 DNAAF2Q9NVR5 837 aaKnown RBP8.71□□□□□ -1.01
CDH9-202ENST00000505020 NOD1Q9Y239 953 aa8.71□□□□□ -1.01
CDH9-202ENST00000505020 CCDC85CA6NKD9 419 aa8.7□□□□□ -1.02
CDH9-202ENST00000505020 TCEA3O75764 348 aa8.7□□□□□ -1.02
CDH9-202ENST00000505020 CTSHP09668 335 aa8.7□□□□□ -1.02
CDH9-202ENST00000505020 PPM1FP49593 454 aaPredicted RBP8.7□□□□□ -1.02
CDH9-202ENST00000505020 PAK2Q13177 524 aa8.7□□□□□ -1.02
CDH9-202ENST00000505020 TKFCQ3LXA3 575 aa8.7□□□□□ -1.02
CDH9-202ENST00000505020 DUSP27Q5VZP5 1158 aa8.7□□□□□ -1.02
CDH9-202ENST00000505020 SULF1Q8IWU6 871 aa8.7□□□□□ -1.02
CDH9-202ENST00000505020 ANKRD42Q8N9B4 389 aa8.7□□□□□ -1.02
CDH9-202ENST00000505020 SKA1Q96BD8 255 aa8.7□□□□□ -1.02
CDH9-202ENST00000505020 CDHR1Q96JP9 859 aa8.7□□□□□ -1.02
CDH9-202ENST00000505020 FEZ1Q99689 392 aa8.7□□□□□ -1.02
CDH9-202ENST00000505020 SELENOOQ9BVL4 669 aa8.7□□□□□ -1.02
CDH9-202ENST00000505020 ORC4O43929 436 aa8.7□□□□□ -1.02
CDH9-202ENST00000505020 DKK1O94907 266 aa8.7□□□□□ -1.02
CDH9-202ENST00000505020 CNGA1P29973 690 aa8.7□□□□□ -1.02
CDH9-202ENST00000505020 UVSSAQ2YD98 709 aa8.7□□□□□ -1.02
CDH9-202ENST00000505020 HYIQ5T013 277 aa8.7□□□□□ -1.02
CDH9-202ENST00000505020 SERINC2Q96SA4 455 aa8.7□□□□□ -1.02
CDH9-202ENST00000505020 SRRTQ9BXP5 876 aaKnown RBP8.7□□□□□ -1.02
CDH9-202ENST00000505020 TRIM55Q9BYV6 548 aa8.7□□□□□ -1.02
CDH9-202ENST00000505020 KMT5AQ9NQR1 393 aa8.7□□□□□ -1.02
CDH9-202ENST00000505020 RCCD1A6NED2 376 aa8.69□□□□□ -1.02
CDH9-202ENST00000505020 NDUFB5O43674 189 aa8.69□□□□□ -1.02
CDH9-202ENST00000505020 IFIT2P09913 472 aaKnown RBP8.69□□□□□ -1.02
CDH9-202ENST00000505020 LMNB1P20700 586 aa8.69□□□□□ -1.02
CDH9-202ENST00000505020 MTMR2Q13614 643 aa8.69□□□□□ -1.02
CDH9-202ENST00000505020 NAA30Q147X3 362 aaPredicted RBP8.69□□□□□ -1.02
CDH9-202ENST00000505020 CHADLQ6NUI6 762 aa8.69□□□□□ -1.02
CDH9-202ENST00000505020 HLA-CQ95604 372 aa8.69□□□□□ -1.02
CDH9-202ENST00000505020 TMEM106CQ9BVX2 250 aa8.69□□□□□ -1.02
CDH9-202ENST00000505020 KIAA1024Q9UPX6 916 aa8.69□□□□□ -1.02
CDH9-202ENST00000505020 KCNQ2O43526 872 aa8.68□□□□□ -1.02
CDH9-202ENST00000505020 DIAPH1O60610 1272 aaKnown RBP8.68□□□□□ -1.02
CDH9-202ENST00000505020 SSBP05455 408 aaKnown RBP eCLIP8.68□□□□□ -1.02
CDH9-202ENST00000505020 SSR1P43307 286 aaKnown RBP8.68□□□□□ -1.02
CDH9-202ENST00000505020 RAB27AP51159 221 aa8.68□□□□□ -1.02
CDH9-202ENST00000505020 ATP2B2Q01814 1243 aa8.68□□□□□ -1.02
CDH9-202ENST00000505020 DALRD3Q5D0E6 543 aaKnown RBP8.68□□□□□ -1.02
CDH9-202ENST00000505020 ANKS3Q6ZW76 656 aa8.68□□□□□ -1.02
CDH9-202ENST00000505020 PLPP7Q8NBV4 271 aa8.68□□□□□ -1.02
CDH9-202ENST00000505020 MPP4Q96JB8 637 aa8.68□□□□□ -1.02
CDH9-202ENST00000505020 CD248Q9HCU0 757 aa8.68□□□□□ -1.02
CDH9-202ENST00000505020 C9orf78Q9NZ63 289 aaPredicted RBP8.68□□□□□ -1.02
CDH9-202ENST00000505020 hCG_1984214I3L0E3 225 aa8.68□□□□□ -1.02
CDH9-202ENST00000505020 MZF1P28698 734 aaPredicted RBP8.68□□□□□ -1.02
CDH9-202ENST00000505020 C16orf86Q6ZW13 317 aa8.68□□□□□ -1.02
CDH9-202ENST00000505020 UBE2Q1Q7Z7E8 422 aa8.68□□□□□ -1.02
CDH9-202ENST00000505020 DDX42Q86XP3 938 aaKnown RBP eCLIP8.68□□□□□ -1.02
CDH9-202ENST00000505020 TRPM4Q8TD43 1214 aa8.68□□□□□ -1.02
CDH9-202ENST00000505020 ATRIPQ8WXE1 791 aa8.68□□□□□ -1.02
CDH9-202ENST00000505020 GPRASP2Q96D09 838 aa8.68□□□□□ -1.02
CDH9-202ENST00000505020 NUDT16Q96DE0 195 aaKnown RBP8.68□□□□□ -1.02
CDH9-202ENST00000505020 TMEM260Q9NX78 707 aa8.68□□□□□ -1.02
CDH9-202ENST00000505020 ZIM2Q9NZV7 527 aa8.68□□□□□ -1.02
CDH9-202ENST00000505020 EPB42P16452 691 aa8.67□□□□□ -1.02
CDH9-202ENST00000505020 HSP90AA2PQ14568 343 aaPredicted RBP8.67□□□□□ -1.02
CDH9-202ENST00000505020 SPECC1Q5M775 1068 aa8.67□□□□□ -1.02
CDH9-202ENST00000505020 TTC13Q8NBP0 860 aa8.67□□□□□ -1.02
CDH9-202ENST00000505020 TRIM52Q96A61 297 aa8.67□□□□□ -1.02
CDH9-202ENST00000505020 ZNF830Q96NB3 372 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms