RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 ARSJQ5FYB0 599 aaPredicted RBP5.72□□□□□ -1.49
CALD1-224ENST00000498254 LRRC69Q6ZNQ3 347 aa5.72□□□□□ -1.49
CALD1-224ENST00000498254 GPR161Q8N6U8 529 aaKnown RBP5.72□□□□□ -1.49
CALD1-224ENST00000498254 RNF34Q969K3 372 aa5.72□□□□□ -1.49
CALD1-224ENST00000498254 NEUROD4Q9HD90 331 aa5.72□□□□□ -1.49
CALD1-224ENST00000498254 FAM13BQ9NYF5 915 aa5.72□□□□□ -1.49
CALD1-224ENST00000498254 DNMT3LQ9UJW3 386 aa5.72□□□□□ -1.49
CALD1-224ENST00000498254 CPNE3O75131 537 aaKnown RBP5.71□□□□□ -1.5
CALD1-224ENST00000498254 POLR3DP05423 398 aaPredicted RBP5.71□□□□□ -1.5
CALD1-224ENST00000498254 ATP4AP20648 1035 aa5.71□□□□□ -1.5
CALD1-224ENST00000498254 ZNF76P36508 570 aa5.71□□□□□ -1.5
CALD1-224ENST00000498254 RAD51AP2Q09MP3 1159 aa5.71□□□□□ -1.5
CALD1-224ENST00000498254 TRIP4Q15650 581 aaPredicted RBP5.71□□□□□ -1.5
CALD1-224ENST00000498254 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.71□□□□□ -1.5
CALD1-224ENST00000498254 NBPF10Q6P3W6 841 aaKnown RBP5.71□□□□□ -1.5
CALD1-224ENST00000498254 ZNF438Q7Z4V0 828 aa5.71□□□□□ -1.5
CALD1-224ENST00000498254 DRC1Q96MC2 740 aa5.71□□□□□ -1.5
CALD1-224ENST00000498254 CNTNAP3BQ96NU0 1288 aa5.71□□□□□ -1.5
CALD1-224ENST00000498254 CNTNAP3Q9BZ76 1288 aa5.71□□□□□ -1.5
CALD1-224ENST00000498254 GPAMQ9HCL2 828 aa5.71□□□□□ -1.5
CALD1-224ENST00000498254 ZDHHC3Q9NYG2 299 aa5.71□□□□□ -1.5
CALD1-224ENST00000498254 FIGNL2A6NMB9 653 aa5.7□□□□□ -1.5
CALD1-224ENST00000498254 UBAP1LF5GYI3 381 aa5.7□□□□□ -1.5
CALD1-224ENST00000498254 ARSDP51689 593 aa5.7□□□□□ -1.5
CALD1-224ENST00000498254 HIF1AQ16665 826 aa5.7□□□□□ -1.5
CALD1-224ENST00000498254 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.7□□□□□ -1.5
CALD1-224ENST00000498254 BTLAQ7Z6A9 289 aa5.7□□□□□ -1.5
CALD1-224ENST00000498254 METTL16Q86W50 562 aaKnown RBP5.7□□□□□ -1.5
CALD1-224ENST00000498254 GALNT6Q8NCL4 622 aa5.7□□□□□ -1.5
CALD1-224ENST00000498254 RNF217Q8TC41 542 aa5.7□□□□□ -1.5
CALD1-224ENST00000498254 EPS8L3Q8TE67 593 aaKnown RBP5.7□□□□□ -1.5
CALD1-224ENST00000498254 FBF1Q8TES7 1133 aa5.7□□□□□ -1.5
CALD1-224ENST00000498254 C7orf43Q8WVR3 580 aa5.7□□□□□ -1.5
CALD1-224ENST00000498254 KRTAP9-8Q9BYQ0 159 aa5.7□□□□□ -1.5
CALD1-224ENST00000498254 CCSER2Q9H7U1 834 aa5.7□□□□□ -1.5
CALD1-224ENST00000498254 CAPN10Q9HC96 672 aa5.7□□□□□ -1.5
CALD1-224ENST00000498254 DMGDHQ9UI17 866 aaKnown RBP5.7□□□□□ -1.5
CALD1-224ENST00000498254 RTCBQ9Y3I0 505 aaKnown RBP5.7□□□□□ -1.5
CALD1-224ENST00000498254 SPATA31C2B4DYI2 1134 aa5.69□□□□□ -1.5
CALD1-224ENST00000498254 TNFRSF21O75509 655 aa5.69□□□□□ -1.5
CALD1-224ENST00000498254 NEFLP07196 543 aa5.69□□□□□ -1.5
CALD1-224ENST00000498254 CTSHP09668 335 aa5.69□□□□□ -1.5
CALD1-224ENST00000498254 EIF4BP23588 611 aaKnown RBP5.69□□□□□ -1.5
CALD1-224ENST00000498254 ITGAEP38570 1179 aa5.69□□□□□ -1.5
CALD1-224ENST00000498254 LYSMD3Q7Z3D4 306 aa5.69□□□□□ -1.5
CALD1-224ENST00000498254 ZIC5Q96T25 663 aa5.69□□□□□ -1.5
CALD1-224ENST00000498254 COL25A1Q9BXS0 654 aaPredicted RBP5.69□□□□□ -1.5
CALD1-224ENST00000498254 TIMMDC1Q9NPL8 285 aa5.69□□□□□ -1.5
CALD1-224ENST00000498254 TMEM63CQ9P1W3 806 aa5.69□□□□□ -1.5
CALD1-224ENST00000498254 SPG7Q9UQ90 795 aa5.69□□□□□ -1.5
CALD1-224ENST00000498254 PCDHGB7Q9Y5F8 929 aa5.69□□□□□ -1.5
CALD1-224ENST00000498254 GJA3Q9Y6H8 435 aa5.69□□□□□ -1.5
CALD1-224ENST00000498254 AK5Q9Y6K8 562 aa5.69□□□□□ -1.5
CALD1-224ENST00000498254 PHACTR2O75167 634 aa5.68□□□□□ -1.5
CALD1-224ENST00000498254 RPLP1P05386 114 aaKnown RBP5.68□□□□□ -1.5
CALD1-224ENST00000498254 MSX1P28360 303 aa5.68□□□□□ -1.5
CALD1-224ENST00000498254 INPP5BP32019 993 aa5.68□□□□□ -1.5
CALD1-224ENST00000498254 TNNI2P48788 182 aa5.68□□□□□ -1.5
CALD1-224ENST00000498254 PTSQ03393 145 aa5.68□□□□□ -1.5
CALD1-224ENST00000498254 LAMC2Q13753 1193 aa5.68□□□□□ -1.5
CALD1-224ENST00000498254 ZNF394Q53GI3 561 aa5.68□□□□□ -1.5
CALD1-224ENST00000498254 IER5Q5VY09 327 aa5.68□□□□□ -1.5
CALD1-224ENST00000498254 SNX29Q8TEQ0 813 aa5.68□□□□□ -1.5
CALD1-224ENST00000498254 NANOS1Q8WY41 292 aaKnown RBP5.68□□□□□ -1.5
CALD1-224ENST00000498254 CCDC74AQ96AQ1 378 aa5.68□□□□□ -1.5
CALD1-224ENST00000498254 CRELD1Q96HD1 420 aa5.68□□□□□ -1.5
CALD1-224ENST00000498254 CEP63Q96MT8 703 aa5.68□□□□□ -1.5
CALD1-224ENST00000498254 DNAJC25Q9H1X3 360 aa5.68□□□□□ -1.5
CALD1-224ENST00000498254 ACBD3Q9H3P7 528 aa5.68□□□□□ -1.5
CALD1-224ENST00000498254 RUBCNLQ9H714 662 aa5.68□□□□□ -1.5
CALD1-224ENST00000498254 ELP3Q9H9T3 547 aa5.68□□□□□ -1.5
CALD1-224ENST00000498254 NPHS2Q9NP85 383 aa5.68□□□□□ -1.5
CALD1-224ENST00000498254 ANKIB1Q9P2G1 1089 aa5.68□□□□□ -1.5
CALD1-224ENST00000498254 KCNMB2Q9Y691 235 aa5.68□□□□□ -1.5
CALD1-224ENST00000498254 A0A1W2PNR3 127 aa5.67□□□□□ -1.5
CALD1-224ENST00000498254 TTLL8A6PVC2 850 aa5.67□□□□□ -1.5
CALD1-224ENST00000498254 SF3A1Q15459 793 aaKnown RBP5.67□□□□□ -1.5
CALD1-224ENST00000498254 MEI1Q5TIA1 1274 aa5.67□□□□□ -1.5
CALD1-224ENST00000498254 ZNF385CQ66K41 422 aaPredicted RBP5.67□□□□□ -1.5
CALD1-224ENST00000498254 SVOPQ8N4V2 548 aa5.67□□□□□ -1.5
CALD1-224ENST00000498254 OSBPL7Q9BZF2 842 aa5.67□□□□□ -1.5
CALD1-224ENST00000498254 METTL5Q9NRN9 209 aaKnown RBP5.67□□□□□ -1.5
CALD1-224ENST00000498254 NLRP2Q9NX02 1062 aa5.67□□□□□ -1.5
CALD1-224ENST00000498254 FNDC3AQ9Y2H6 1198 aaKnown RBP5.67□□□□□ -1.5
CALD1-224ENST00000498254 A0A1B0GTH6 734 aa5.66□□□□□ -1.5
CALD1-224ENST00000498254 EREGO14944 169 aa5.66□□□□□ -1.5
CALD1-224ENST00000498254 XYLBO75191 536 aa5.66□□□□□ -1.5
CALD1-224ENST00000498254 GADD45BO75293 160 aaPredicted RBP5.66□□□□□ -1.5
CALD1-224ENST00000498254 SLURP2P0DP57 97 aa5.66□□□□□ -1.5
CALD1-224ENST00000498254 GRNP28799 593 aaKnown RBP5.66□□□□□ -1.5
CALD1-224ENST00000498254 TYRO3Q06418 890 aa5.66□□□□□ -1.5
CALD1-224ENST00000498254 RNFT1Q5M7Z0 435 aa5.66□□□□□ -1.5
CALD1-224ENST00000498254 KRT25Q7Z3Z0 450 aa5.66□□□□□ -1.5
CALD1-224ENST00000498254 GAS2L1Q99501 681 aaPredicted RBP5.66□□□□□ -1.5
CALD1-224ENST00000498254 SPOCK3Q9BQ16 436 aa5.66□□□□□ -1.5
CALD1-224ENST00000498254 TINF2Q9BSI4 451 aa5.66□□□□□ -1.5
CALD1-224ENST00000498254 TANGO6Q9C0B7 1094 aa5.66□□□□□ -1.5
CALD1-224ENST00000498254 TGIF2Q9GZN2 237 aa5.66□□□□□ -1.5
CALD1-224ENST00000498254 C12orf49Q9H741 205 aa5.66□□□□□ -1.5
CALD1-224ENST00000498254 ZFYVE28Q9HCC9 887 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms