RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 AEBP2Q6ZN18 517 aaPredicted RBP17.71■□□□□ 0.43
CALD1-224ENST00000498254 CHIC1Q5VXU3 224 aa16.77■□□□□ 0.28
CALD1-224ENST00000498254 POTEDQ86YR6 584 aa16.44■□□□□ 0.22
CALD1-224ENST00000498254 SENP3Q9H4L4 574 aaPredicted RBP15.56■□□□□ 0.08
CALD1-224ENST00000498254 PHF23Q9BUL5 403 aaPredicted RBP15.05■□□□□ -0
CALD1-224ENST00000498254 FOXD1Q16676 465 aa14.55□□□□□ -0.08
CALD1-224ENST00000498254 MSH5O43196 834 aa14.36□□□□□ -0.11
CALD1-224ENST00000498254 PIAS4Q8N2W9 510 aaPredicted RBP13.35□□□□□ -0.27
CALD1-224ENST00000498254 CACNB1Q02641 598 aaPredicted RBP13.24□□□□□ -0.29
CALD1-224ENST00000498254 PLPPR3Q6T4P5 718 aa12.9□□□□□ -0.34
CALD1-224ENST00000498254 PPP6R1Q9UPN7 881 aa12.77□□□□□ -0.37
CALD1-224ENST00000498254 ADRA2BP18089 450 aa12.73□□□□□ -0.37
CALD1-224ENST00000498254 POTEHQ6S545 545 aa12.64□□□□□ -0.39
CALD1-224ENST00000498254 DMRT2Q9Y5R5 561 aa12.03□□□□□ -0.48
CALD1-224ENST00000498254 RNF39Q9H2S5 420 aa12.01□□□□□ -0.49
CALD1-224ENST00000498254 C1QBPQ07021 282 aaKnown RBP11.83□□□□□ -0.52
CALD1-224ENST00000498254 DCAF8L1A6NGE4 600 aa11.75□□□□□ -0.53
CALD1-224ENST00000498254 MAPK8IP2Q13387 824 aaPredicted RBP11.75□□□□□ -0.53
CALD1-224ENST00000498254 SCAF1Q9H7N4 1312 aaKnown RBP11.68□□□□□ -0.54
CALD1-224ENST00000498254 PPP4R3CPQ6ZMV5 832 aa11.27□□□□□ -0.61
CALD1-224ENST00000498254 HOXD11P31277 338 aaPredicted RBP11.21□□□□□ -0.61
CALD1-224ENST00000498254 SP7Q8TDD2 431 aaPredicted RBP11.16□□□□□ -0.62
CALD1-224ENST00000498254 PLSCR2Q9NRY7 297 aa11.15□□□□□ -0.62
CALD1-224ENST00000498254 CNKSR2Q8WXI2 1034 aa11.12□□□□□ -0.63
CALD1-224ENST00000498254 RNF216Q9NWF9 866 aaPredicted RBP11.08□□□□□ -0.64
CALD1-224ENST00000498254 DNAJC5BQ9UF47 199 aa10.95□□□□□ -0.66
CALD1-224ENST00000498254 KCNA4P22459 653 aa10.84□□□□□ -0.67
CALD1-224ENST00000498254 NCBP3Q53F19 620 aaKnown RBP10.8□□□□□ -0.68
CALD1-224ENST00000498254 DSG3P32926 999 aa10.73□□□□□ -0.69
CALD1-224ENST00000498254 CHRDL2Q6WN34 429 aa10.71□□□□□ -0.69
CALD1-224ENST00000498254 EHMT2Q96KQ7 1210 aa10.7□□□□□ -0.7
CALD1-224ENST00000498254 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.69□□□□□ -0.7
CALD1-224ENST00000498254 NPM3O75607 178 aaKnown RBP10.62□□□□□ -0.71
CALD1-224ENST00000498254 CAPN15O75808 1086 aa10.55□□□□□ -0.72
CALD1-224ENST00000498254 LHX8Q68G74 356 aa10.45□□□□□ -0.74
CALD1-224ENST00000498254 RBM42Q9BTD8 480 aaKnown RBP10.45□□□□□ -0.74
CALD1-224ENST00000498254 U3KPZ7 1027 aaPredicted RBP10.43□□□□□ -0.74
CALD1-224ENST00000498254 HAX1O00165 279 aa10.42□□□□□ -0.74
CALD1-224ENST00000498254 SLC4A1APQ9BWU0 796 aaKnown RBP10.38□□□□□ -0.75
CALD1-224ENST00000498254 SPINK5Q9NQ38 1064 aaPredicted RBP10.35□□□□□ -0.75
CALD1-224ENST00000498254 CSRNP3Q8WYN3 585 aa10.27□□□□□ -0.77
CALD1-224ENST00000498254 SLC4A2P04920 1241 aa10.19□□□□□ -0.78
CALD1-224ENST00000498254 APLP2Q06481 763 aa10.15□□□□□ -0.78
CALD1-224ENST00000498254 TRHP20396 242 aaPredicted RBP10.12□□□□□ -0.79
CALD1-224ENST00000498254 ABCB7O75027 752 aa10.1□□□□□ -0.79
CALD1-224ENST00000498254 ZNF219Q9P2Y4 722 aaPredicted RBP10.1□□□□□ -0.79
CALD1-224ENST00000498254 PIP4P2Q8N4L2 257 aa10.09□□□□□ -0.79
CALD1-224ENST00000498254 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.08□□□□□ -0.8
CALD1-224ENST00000498254 HNRNPUL2Q1KMD3 747 aaKnown RBP10.08□□□□□ -0.8
CALD1-224ENST00000498254 SAMD1Q6SPF0 538 aaPredicted RBP10.01□□□□□ -0.81
CALD1-224ENST00000498254 ZBTB22O15209 634 aa9.98□□□□□ -0.81
CALD1-224ENST00000498254 EVX2Q03828 476 aa9.96□□□□□ -0.82
CALD1-224ENST00000498254 POTEMA6NI47 508 aa9.94□□□□□ -0.82
CALD1-224ENST00000498254 PCDH10Q9P2E7 1040 aa9.93□□□□□ -0.82
CALD1-224ENST00000498254 POTEGQ6S5H5 508 aa9.84□□□□□ -0.83
CALD1-224ENST00000498254 MYCNP04198 464 aaPredicted RBP9.83□□□□□ -0.84
CALD1-224ENST00000498254 POLA2Q14181 598 aa9.81□□□□□ -0.84
CALD1-224ENST00000498254 AKT1S1Q96B36 256 aa9.81□□□□□ -0.84
CALD1-224ENST00000498254 FOXD4L1Q9NU39 408 aa9.79□□□□□ -0.84
CALD1-224ENST00000498254 GABBR2O75899 941 aa9.77□□□□□ -0.85
CALD1-224ENST00000498254 FXR2P51116 673 aaKnown RBP eCLIP9.77□□□□□ -0.85
CALD1-224ENST00000498254 REM2Q8IYK8 340 aaPredicted RBP9.66□□□□□ -0.86
CALD1-224ENST00000498254 ATF5Q9Y2D1 282 aaPredicted RBP9.6□□□□□ -0.87
CALD1-224ENST00000498254 ZBTB12Q9Y330 459 aaPredicted RBP9.6□□□□□ -0.87
CALD1-224ENST00000498254 PITPNM1O00562 1244 aa9.57□□□□□ -0.88
CALD1-224ENST00000498254 C19orf67A6NJJ6 358 aa9.52□□□□□ -0.89
CALD1-224ENST00000498254 OSCARQ8IYS5 282 aa9.48□□□□□ -0.89
CALD1-224ENST00000498254 POTEIP0CG38 1075 aa9.44□□□□□ -0.9
CALD1-224ENST00000498254 OTUD5Q96G74 571 aa9.44□□□□□ -0.9
CALD1-224ENST00000498254 ATXN8OSP0DMR3 200 aa9.36□□□□□ -0.91
CALD1-224ENST00000498254 PRKAR2AP13861 404 aaKnown RBP9.36□□□□□ -0.91
CALD1-224ENST00000498254 DCBLD2Q96PD2 775 aa9.33□□□□□ -0.92
CALD1-224ENST00000498254 FKBP8Q14318 412 aa9.3□□□□□ -0.92
CALD1-224ENST00000498254 SPDYE2BA6NHP3 402 aa9.28□□□□□ -0.92
CALD1-224ENST00000498254 SPDYE6P0CI01 402 aa9.28□□□□□ -0.92
CALD1-224ENST00000498254 SPDYE2Q495Y8 402 aa9.28□□□□□ -0.92
CALD1-224ENST00000498254 FBLN2P98095 1184 aa9.27□□□□□ -0.93
CALD1-224ENST00000498254 RTN4Q9NQC3 1192 aaKnown RBP9.27□□□□□ -0.93
CALD1-224ENST00000498254 CLCN6P51797 869 aa9.25□□□□□ -0.93
CALD1-224ENST00000498254 AMER1Q5JTC6 1135 aaPredicted RBP9.19□□□□□ -0.94
CALD1-224ENST00000498254 SPDYE1Q8NFV5 336 aaPredicted RBP9.17□□□□□ -0.94
CALD1-224ENST00000498254 MKRN4PQ13434 485 aaPredicted RBP9.16□□□□□ -0.94
CALD1-224ENST00000498254 CLEC11AQ9Y240 323 aa9.16□□□□□ -0.94
CALD1-224ENST00000498254 FAM163AQ96GL9 167 aaPredicted RBP9.15□□□□□ -0.94
CALD1-224ENST00000498254 CDAN1Q8IWY9 1227 aa9.14□□□□□ -0.95
CALD1-224ENST00000498254 ZNF692Q9BU19 519 aaPredicted RBP9.14□□□□□ -0.95
CALD1-224ENST00000498254 SSUH2Q9Y2M2 353 aa9.12□□□□□ -0.95
CALD1-224ENST00000498254 POTEB2H3BUK9 544 aa9.09□□□□□ -0.95
CALD1-224ENST00000498254 SLC24A1O60721 1099 aa9.08□□□□□ -0.96
CALD1-224ENST00000498254 LCE2DQ5TA82 110 aaPredicted RBP9.08□□□□□ -0.96
CALD1-224ENST00000498254 MMRN1Q13201 1228 aa9.07□□□□□ -0.96
CALD1-224ENST00000498254 PRR29P0C7W0 189 aa8.99□□□□□ -0.97
CALD1-224ENST00000498254 CD44P16070 742 aaKnown RBP8.99□□□□□ -0.97
CALD1-224ENST00000498254 CHADLQ6NUI6 762 aa8.99□□□□□ -0.97
CALD1-224ENST00000498254 MAMSTRQ6ZN01 415 aa8.99□□□□□ -0.97
CALD1-224ENST00000498254 PABPN1Q86U42 306 aaKnown RBP eCLIP8.99□□□□□ -0.97
CALD1-224ENST00000498254 SPNS2Q8IVW8 549 aa8.91□□□□□ -0.98
CALD1-224ENST00000498254 FARP1Q9Y4F1 1045 aaPredicted RBP8.86□□□□□ -0.99
CALD1-224ENST00000498254 SCUBE2Q9NQ36 999 aa8.85□□□□□ -0.99
CALD1-224ENST00000498254 SPDYE4A6NLX3 237 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms