RNA–Protein interactions for RNA: ENST00000495952.5

SURF1-204, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 2

Gene SURF1, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-204ENST00000495952 DNM1Q05193 864 aaKnown RBP11.7□□□□□ -0.54
SURF1-204ENST00000495952 RIC3Q7Z5B4 369 aa11.7□□□□□ -0.54
SURF1-204ENST00000495952 RAPGEF4Q8WZA2 1011 aa11.7□□□□□ -0.54
SURF1-204ENST00000495952 LLPHQ9BRT6 129 aaKnown RBP11.7□□□□□ -0.54
SURF1-204ENST00000495952 GPR108Q9NPR9 543 aa11.7□□□□□ -0.54
SURF1-204ENST00000495952 TPCN1Q9ULQ1 816 aa11.7□□□□□ -0.54
SURF1-204ENST00000495952 TNS3Q68CZ2 1445 aa11.69□□□□□ -0.54
SURF1-204ENST00000495952 STRCP1A6NGW2 1772 aa11.69□□□□□ -0.54
SURF1-204ENST00000495952 ARAP2Q8WZ64 1704 aa11.69□□□□□ -0.54
SURF1-204ENST00000495952 CPDO75976 1380 aa11.69□□□□□ -0.54
SURF1-204ENST00000495952 MYH3P11055 1940 aa11.69□□□□□ -0.54
SURF1-204ENST00000495952 A0A0D9SFI3 127 aa11.69□□□□□ -0.54
SURF1-204ENST00000495952 VPS37CA5D8V6 355 aaPredicted RBP11.69□□□□□ -0.54
SURF1-204ENST00000495952 HMGB1P09429 215 aaKnown RBP11.69□□□□□ -0.54
SURF1-204ENST00000495952 PHKG2P15735 406 aa11.69□□□□□ -0.54
SURF1-204ENST00000495952 RFX5P48382 616 aaPredicted RBP11.69□□□□□ -0.54
SURF1-204ENST00000495952 MAP3K11Q16584 847 aa11.69□□□□□ -0.54
SURF1-204ENST00000495952 LARP1BQ659C4 914 aaKnown RBP11.69□□□□□ -0.54
SURF1-204ENST00000495952 ATL3Q6DD88 541 aa11.69□□□□□ -0.54
SURF1-204ENST00000495952 LRP10Q7Z4F1 713 aa11.69□□□□□ -0.54
SURF1-204ENST00000495952 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.69□□□□□ -0.54
SURF1-204ENST00000495952 MYRIPQ8NFW9 859 aa11.69□□□□□ -0.54
SURF1-204ENST00000495952 FAM200AQ8TCP9 573 aa11.69□□□□□ -0.54
SURF1-204ENST00000495952 FAM227BQ96M60 508 aa11.69□□□□□ -0.54
SURF1-204ENST00000495952 NUP62CLQ9H1M0 184 aa11.69□□□□□ -0.54
SURF1-204ENST00000495952 ZSCAN16Q9H4T2 348 aaPredicted RBP11.69□□□□□ -0.54
SURF1-204ENST00000495952 ZNF609O15014 1411 aa11.69□□□□□ -0.54
SURF1-204ENST00000495952 TAF5LO75529 589 aa11.68□□□□□ -0.54
SURF1-204ENST00000495952 TOB2Q14106 344 aaPredicted RBP11.68□□□□□ -0.54
SURF1-204ENST00000495952 TNNI3KQ59H18 835 aa11.68□□□□□ -0.54
SURF1-204ENST00000495952 KRT28Q7Z3Y7 464 aa11.68□□□□□ -0.54
SURF1-204ENST00000495952 TTC6Q86TZ1 520 aa11.68□□□□□ -0.54
SURF1-204ENST00000495952 IFNL2Q8IZJ0 200 aa11.68□□□□□ -0.54
SURF1-204ENST00000495952 RGS22Q8NE09 1264 aa11.68□□□□□ -0.54
SURF1-204ENST00000495952 GTF3C6Q969F1 213 aa11.68□□□□□ -0.54
SURF1-204ENST00000495952 DCAF5Q96JK2 942 aa11.68□□□□□ -0.54
SURF1-204ENST00000495952 KIF3AQ9Y496 699 aa11.68□□□□□ -0.54
SURF1-204ENST00000495952 FPGT-TNNI3KV9GXZ4 949 aa11.68□□□□□ -0.54
SURF1-204ENST00000495952 NWD2Q9ULI1 1742 aa11.68□□□□□ -0.54
SURF1-204ENST00000495952 ABCC12Q96J65 1359 aa11.67□□□□□ -0.54
SURF1-204ENST00000495952 KCPQ6ZWJ8 1503 aa11.67□□□□□ -0.54
SURF1-204ENST00000495952 C4AP0C0L4 1744 aa11.67□□□□□ -0.54
SURF1-204ENST00000495952 C4BP0C0L5 1744 aa11.67□□□□□ -0.54
SURF1-204ENST00000495952 SNRPA1P09661 255 aaKnown RBP11.67□□□□□ -0.54
SURF1-204ENST00000495952 CPA1P15085 419 aa11.67□□□□□ -0.54
SURF1-204ENST00000495952 CDC37L1Q7L3B6 337 aa11.67□□□□□ -0.54
SURF1-204ENST00000495952 XAGE3Q8WTP9 111 aa11.67□□□□□ -0.54
SURF1-204ENST00000495952 FMNL2Q96PY5 1086 aa11.67□□□□□ -0.54
SURF1-204ENST00000495952 HAUS7Q99871 368 aa11.67□□□□□ -0.54
SURF1-204ENST00000495952 COL22A1Q8NFW1 1626 aaPredicted RBP11.67□□□□□ -0.54
SURF1-204ENST00000495952 ECM29Q5VYK3 1845 aa11.67□□□□□ -0.54
SURF1-204ENST00000495952 XIRP1Q702N8 1843 aaKnown RBP11.66□□□□□ -0.54
SURF1-204ENST00000495952 PTPN12Q05209 780 aaKnown RBP11.66□□□□□ -0.54
SURF1-204ENST00000495952 NOLC1Q14978 699 aaKnown RBP eCLIP11.66□□□□□ -0.54
SURF1-204ENST00000495952 ANKRD13DQ6ZTN6 518 aa11.66□□□□□ -0.54
SURF1-204ENST00000495952 SMARCC2Q8TAQ2 1214 aa11.66□□□□□ -0.54
SURF1-204ENST00000495952 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.66□□□□□ -0.54
SURF1-204ENST00000495952 MYD88Q99836 296 aa11.66□□□□□ -0.54
SURF1-204ENST00000495952 DSCC1Q9BVC3 393 aa11.66□□□□□ -0.54
SURF1-204ENST00000495952 CCDC8Q9H0W5 538 aaPredicted RBP11.66□□□□□ -0.54
SURF1-204ENST00000495952 BOLA2Q9H3K6 86 aa11.66□□□□□ -0.54
SURF1-204ENST00000495952 CLSTN2Q9H4D0 955 aa11.66□□□□□ -0.54
SURF1-204ENST00000495952 HELLSQ9NRZ9 838 aa11.66□□□□□ -0.54
SURF1-204ENST00000495952 TLR7Q9NYK1 1049 aaKnown RBP11.66□□□□□ -0.54
SURF1-204ENST00000495952 CHD4Q14839 1912 aa11.65□□□□□ -0.54
SURF1-204ENST00000495952 ZBTB7CA1YPR0 619 aa11.65□□□□□ -0.54
SURF1-204ENST00000495952 PRAMEF22A3QJZ6 481 aa11.65□□□□□ -0.54
SURF1-204ENST00000495952 CTAGE5O15320 804 aa11.65□□□□□ -0.54
SURF1-204ENST00000495952 CDC25BP30305 580 aa11.65□□□□□ -0.54
SURF1-204ENST00000495952 CASP7P55210 303 aa11.65□□□□□ -0.54
SURF1-204ENST00000495952 TYRO3Q06418 890 aa11.65□□□□□ -0.54
SURF1-204ENST00000495952 RESTQ13127 1097 aa11.65□□□□□ -0.54
SURF1-204ENST00000495952 MCMDC2Q4G0Z9 681 aa11.65□□□□□ -0.54
SURF1-204ENST00000495952 NAA16Q6N069 864 aaPredicted RBP11.65□□□□□ -0.54
SURF1-204ENST00000495952 TTC5Q8N0Z6 440 aa11.65□□□□□ -0.54
SURF1-204ENST00000495952 FBXL16Q8N461 479 aa11.65□□□□□ -0.54
SURF1-204ENST00000495952 KBTBD3Q8NAB2 608 aa11.65□□□□□ -0.54
SURF1-204ENST00000495952 PLBD2Q8NHP8 589 aa11.65□□□□□ -0.54
SURF1-204ENST00000495952 TDRD7Q8NHU6 1098 aaKnown RBP11.65□□□□□ -0.54
SURF1-204ENST00000495952 SPATA32Q96LK8 384 aa11.65□□□□□ -0.54
SURF1-204ENST00000495952 NEK1Q96PY6 1258 aa11.65□□□□□ -0.54
SURF1-204ENST00000495952 ORAI2Q96SN7 254 aa11.65□□□□□ -0.54
SURF1-204ENST00000495952 AGXT2Q9BYV1 514 aa11.65□□□□□ -0.54
SURF1-204ENST00000495952 ATG3Q9NT62 314 aa11.65□□□□□ -0.54
SURF1-204ENST00000495952 DBNLQ9UJU6 430 aaKnown RBP11.65□□□□□ -0.54
SURF1-204ENST00000495952 CFAP45Q9UL16 551 aa11.65□□□□□ -0.54
SURF1-204ENST00000495952 TNS2Q63HR2 1409 aa11.65□□□□□ -0.54
SURF1-204ENST00000495952 TOGARAM1Q9Y4F4 1720 aa11.64□□□□□ -0.55
SURF1-204ENST00000495952 FOXD4L6Q3SYB3 417 aaPredicted RBP11.64□□□□□ -0.55
SURF1-204ENST00000495952 GIMAP6Q6P9H5 292 aa11.64□□□□□ -0.55
SURF1-204ENST00000495952 FOXD4L3Q6VB84 417 aaPredicted RBP11.64□□□□□ -0.55
SURF1-204ENST00000495952 COPS6Q7L5N1 327 aa11.64□□□□□ -0.55
SURF1-204ENST00000495952 ZNF589Q86UQ0 364 aaPredicted RBP11.64□□□□□ -0.55
SURF1-204ENST00000495952 NECAB1Q8N987 351 aa11.64□□□□□ -0.55
SURF1-204ENST00000495952 KIAA1524Q8TCG1 905 aa11.64□□□□□ -0.55
SURF1-204ENST00000495952 LEO1Q8WVC0 666 aaPredicted RBP11.64□□□□□ -0.55
SURF1-204ENST00000495952 TNMDQ9H2S6 317 aa11.64□□□□□ -0.55
SURF1-204ENST00000495952 C19orf44Q9H6X5 657 aa11.64□□□□□ -0.55
SURF1-204ENST00000495952 FBXO3Q9UK99 471 aa11.64□□□□□ -0.55
SURF1-204ENST00000495952 AXIN2Q9Y2T1 843 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms