RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 ZFYVE28Q9HCC9 887 aa8.15□□□□□ -1.1
PRPF38A-203ENST00000487160 CNTN3Q9P232 1028 aa8.15□□□□□ -1.1
PRPF38A-203ENST00000487160 BNIP3LO60238 219 aa8.14□□□□□ -1.11
PRPF38A-203ENST00000487160 MAPTP10636 758 aaKnown RBP8.14□□□□□ -1.11
PRPF38A-203ENST00000487160 CHRDQ9H2X0 955 aa8.14□□□□□ -1.11
PRPF38A-203ENST00000487160 MRS2Q9HD23 443 aa8.14□□□□□ -1.11
PRPF38A-203ENST00000487160 STRN4Q9NRL3 753 aa8.14□□□□□ -1.11
PRPF38A-203ENST00000487160 HCN2Q9UL51 889 aa8.14□□□□□ -1.11
PRPF38A-203ENST00000487160 SORBS3O60504 671 aa8.13□□□□□ -1.11
PRPF38A-203ENST00000487160 POLR3DP05423 398 aaPredicted RBP8.13□□□□□ -1.11
PRPF38A-203ENST00000487160 SNRPBP14678 240 aaKnown RBP8.13□□□□□ -1.11
PRPF38A-203ENST00000487160 TARSP26639 723 aaKnown RBP8.13□□□□□ -1.11
PRPF38A-203ENST00000487160 CCINQ13939 588 aa8.13□□□□□ -1.11
PRPF38A-203ENST00000487160 GRIN2CQ14957 1233 aa8.13□□□□□ -1.11
PRPF38A-203ENST00000487160 TTC39BQ5VTQ0 682 aaPredicted RBP8.13□□□□□ -1.11
PRPF38A-203ENST00000487160 KRT25Q7Z3Z0 450 aa8.13□□□□□ -1.11
PRPF38A-203ENST00000487160 C1orf127Q8N9H9 656 aa8.13□□□□□ -1.11
PRPF38A-203ENST00000487160 CCDC74AQ96AQ1 378 aa8.13□□□□□ -1.11
PRPF38A-203ENST00000487160 ZNF837Q96EG3 531 aaPredicted RBP8.13□□□□□ -1.11
PRPF38A-203ENST00000487160 GSX2Q9BZM3 304 aa8.13□□□□□ -1.11
PRPF38A-203ENST00000487160 NDFIP2Q9NV92 336 aa8.13□□□□□ -1.11
PRPF38A-203ENST00000487160 ABI2Q9NYB9 513 aaPredicted RBP8.13□□□□□ -1.11
PRPF38A-203ENST00000487160 EREGO14944 169 aa8.12□□□□□ -1.11
PRPF38A-203ENST00000487160 TCF3P15923 654 aa8.12□□□□□ -1.11
PRPF38A-203ENST00000487160 ITGA6P23229 1130 aa8.12□□□□□ -1.11
PRPF38A-203ENST00000487160 GNA15P30679 374 aa8.12□□□□□ -1.11
PRPF38A-203ENST00000487160 IRS1P35568 1242 aa8.12□□□□□ -1.11
PRPF38A-203ENST00000487160 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.12□□□□□ -1.11
PRPF38A-203ENST00000487160 PI16Q6UXB8 463 aa8.12□□□□□ -1.11
PRPF38A-203ENST00000487160 EPS8L3Q8TE67 593 aaKnown RBP8.12□□□□□ -1.11
PRPF38A-203ENST00000487160 GTPBP3Q969Y2 492 aaKnown RBP8.12□□□□□ -1.11
PRPF38A-203ENST00000487160 ABHD17AQ96GS6 310 aa8.12□□□□□ -1.11
PRPF38A-203ENST00000487160 LAMC2Q13753 1193 aa8.11□□□□□ -1.11
PRPF38A-203ENST00000487160 LDLRAD1Q5T700 205 aa8.11□□□□□ -1.11
PRPF38A-203ENST00000487160 MARK1Q9P0L2 795 aa8.11□□□□□ -1.11
PRPF38A-203ENST00000487160 VTI1BQ9UEU0 232 aa8.11□□□□□ -1.11
PRPF38A-203ENST00000487160 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.11□□□□□ -1.11
PRPF38A-203ENST00000487160 MMP20O60882 483 aa8.1□□□□□ -1.11
PRPF38A-203ENST00000487160 CYP2E1P05181 493 aaPredicted RBP8.1□□□□□ -1.11
PRPF38A-203ENST00000487160 CD33P20138 364 aa8.1□□□□□ -1.11
PRPF38A-203ENST00000487160 CES1P23141 567 aa8.1□□□□□ -1.11
PRPF38A-203ENST00000487160 GMCL1Q96IK5 515 aa8.1□□□□□ -1.11
PRPF38A-203ENST00000487160 ZFATQ9P243 1243 aa8.1□□□□□ -1.11
PRPF38A-203ENST00000487160 SPG7Q9UQ90 795 aa8.1□□□□□ -1.11
PRPF38A-203ENST00000487160 AK5Q9Y6K8 562 aa8.1□□□□□ -1.11
PRPF38A-203ENST00000487160 C11orf95C9JLR9 678 aaPredicted RBP8.09□□□□□ -1.11
PRPF38A-203ENST00000487160 RARAP10276 462 aa8.09□□□□□ -1.11
PRPF38A-203ENST00000487160 ITGAEP38570 1179 aa8.09□□□□□ -1.11
PRPF38A-203ENST00000487160 SPEM2Q0P670 501 aa8.09□□□□□ -1.11
PRPF38A-203ENST00000487160 Q6ZNB5 142 aa8.09□□□□□ -1.11
PRPF38A-203ENST00000487160 GALNT12Q8IXK2 581 aa8.09□□□□□ -1.11
PRPF38A-203ENST00000487160 TMEM87AQ8NBN3 555 aa8.09□□□□□ -1.11
PRPF38A-203ENST00000487160 PMEPA1Q969W9 287 aa8.09□□□□□ -1.11
PRPF38A-203ENST00000487160 FRMD6Q96NE9 622 aa8.09□□□□□ -1.11
PRPF38A-203ENST00000487160 SLC30A3Q99726 388 aa8.09□□□□□ -1.11
PRPF38A-203ENST00000487160 NPHS2Q9NP85 383 aa8.09□□□□□ -1.11
PRPF38A-203ENST00000487160 NLRP2Q9NX02 1062 aa8.09□□□□□ -1.11
PRPF38A-203ENST00000487160 LCE2BO14633 110 aa8.08□□□□□ -1.12
PRPF38A-203ENST00000487160 PPFIA3O75145 1194 aa8.08□□□□□ -1.12
PRPF38A-203ENST00000487160 RAB44Q7Z6P3 723 aaPredicted RBP8.08□□□□□ -1.12
PRPF38A-203ENST00000487160 PNMA5Q96PV4 448 aa8.08□□□□□ -1.12
PRPF38A-203ENST00000487160 OSBPL7Q9BZF2 842 aa8.08□□□□□ -1.12
PRPF38A-203ENST00000487160 KANSL3Q9P2N6 904 aa8.08□□□□□ -1.12
PRPF38A-203ENST00000487160 ATXN7L1Q9ULK2 861 aaPredicted RBP8.08□□□□□ -1.12
PRPF38A-203ENST00000487160 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.08□□□□□ -1.12
PRPF38A-203ENST00000487160 CDC14CA4D256 554 aa8.07□□□□□ -1.12
PRPF38A-203ENST00000487160 GPR25O00155 361 aa8.07□□□□□ -1.12
PRPF38A-203ENST00000487160 SCAMP3O14828 347 aaKnown RBP8.07□□□□□ -1.12
PRPF38A-203ENST00000487160 NFKB1P19838 968 aa8.07□□□□□ -1.12
PRPF38A-203ENST00000487160 VWA5B2Q8N398 1253 aa8.07□□□□□ -1.12
PRPF38A-203ENST00000487160 OR13H1Q8NG92 308 aa8.07□□□□□ -1.12
PRPF38A-203ENST00000487160 BHMTQ93088 406 aa8.07□□□□□ -1.12
PRPF38A-203ENST00000487160 GADD45BO75293 160 aaPredicted RBP8.06□□□□□ -1.12
PRPF38A-203ENST00000487160 CTSHP09668 335 aa8.06□□□□□ -1.12
PRPF38A-203ENST00000487160 FGFR3P22607 806 aa8.06□□□□□ -1.12
PRPF38A-203ENST00000487160 EIF4BP23588 611 aaKnown RBP8.06□□□□□ -1.12
PRPF38A-203ENST00000487160 CTBSQ01459 385 aa8.06□□□□□ -1.12
PRPF38A-203ENST00000487160 PHF24Q9UPV7 400 aa8.06□□□□□ -1.12
PRPF38A-203ENST00000487160 PHF20L1A8MW92 1017 aa8.05□□□□□ -1.12
PRPF38A-203ENST00000487160 POTECB2RU33 542 aa8.05□□□□□ -1.12
PRPF38A-203ENST00000487160 GIPC1O14908 333 aa8.05□□□□□ -1.12
PRPF38A-203ENST00000487160 VEGFBP49765 207 aa8.05□□□□□ -1.12
PRPF38A-203ENST00000487160 C9orf131Q5VYM1 1079 aa8.05□□□□□ -1.12
PRPF38A-203ENST00000487160 FOXR1Q6PIV2 292 aa8.05□□□□□ -1.12
PRPF38A-203ENST00000487160 BCO2Q9BYV7 579 aa8.05□□□□□ -1.12
PRPF38A-203ENST00000487160 C12orf49Q9H741 205 aa8.05□□□□□ -1.12
PRPF38A-203ENST00000487160 LATS2Q9NRM7 1088 aa8.05□□□□□ -1.12
PRPF38A-203ENST00000487160 TLR7Q9NYK1 1049 aaKnown RBP8.05□□□□□ -1.12
PRPF38A-203ENST00000487160 SALL4Q9UJQ4 1053 aa8.05□□□□□ -1.12
PRPF38A-203ENST00000487160 PSAPP07602 524 aa8.04□□□□□ -1.12
PRPF38A-203ENST00000487160 HDLBPQ00341 1268 aaKnown RBP8.04□□□□□ -1.12
PRPF38A-203ENST00000487160 FAM182BQ5T319 152 aa8.04□□□□□ -1.12
PRPF38A-203ENST00000487160 COL13A1Q5TAT6 717 aaPredicted RBP8.04□□□□□ -1.12
PRPF38A-203ENST00000487160 NXPE4Q6UWF7 544 aa8.04□□□□□ -1.12
PRPF38A-203ENST00000487160 SV2AQ7L0J3 742 aa8.04□□□□□ -1.12
PRPF38A-203ENST00000487160 TRERF1Q96PN7 1200 aa8.04□□□□□ -1.12
PRPF38A-203ENST00000487160 EFCC1Q9HA90 598 aa8.04□□□□□ -1.12
PRPF38A-203ENST00000487160 A0A1W2PP55 124 aa8.03□□□□□ -1.12
PRPF38A-203ENST00000487160 MAP3K6O95382 1288 aa8.03□□□□□ -1.12
PRPF38A-203ENST00000487160 PEAR1Q5VY43 1037 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms