RNA–Protein interactions for RNA: ENST00000483690.1

MCF2-207, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

TSL 3

Gene MCF2, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-207ENST00000483690 IGSF5Q9NSI5 407 aa12.33□□□□□ -0.44
MCF2-207ENST00000483690 RNF19AQ9NV58 838 aa12.33□□□□□ -0.44
MCF2-207ENST00000483690 CUEDC1Q9NWM3 386 aaPredicted RBP12.33□□□□□ -0.44
MCF2-207ENST00000483690 SORBS3O60504 671 aa12.32□□□□□ -0.44
MCF2-207ENST00000483690 RECKO95980 971 aa12.32□□□□□ -0.44
MCF2-207ENST00000483690 MAPTP10636 758 aaKnown RBP12.32□□□□□ -0.44
MCF2-207ENST00000483690 GNA15P30679 374 aa12.32□□□□□ -0.44
MCF2-207ENST00000483690 CCINQ13939 588 aa12.32□□□□□ -0.44
MCF2-207ENST00000483690 UBAP2LQ14157 1087 aaKnown RBP12.32□□□□□ -0.44
MCF2-207ENST00000483690 USPL1Q5W0Q7 1092 aa12.32□□□□□ -0.44
MCF2-207ENST00000483690 BNIP3LO60238 219 aa12.31□□□□□ -0.44
MCF2-207ENST00000483690 TCF3P15923 654 aa12.31□□□□□ -0.44
MCF2-207ENST00000483690 ITGA6P23229 1130 aa12.31□□□□□ -0.44
MCF2-207ENST00000483690 CCDC74AQ96AQ1 378 aa12.31□□□□□ -0.44
MCF2-207ENST00000483690 FRMD6Q96NE9 622 aa12.31□□□□□ -0.44
MCF2-207ENST00000483690 VTI1BQ9UEU0 232 aa12.31□□□□□ -0.44
MCF2-207ENST00000483690 SPG7Q9UQ90 795 aa12.31□□□□□ -0.44
MCF2-207ENST00000483690 SASH3O75995 380 aa12.3□□□□□ -0.44
MCF2-207ENST00000483690 KRT25Q7Z3Z0 450 aa12.3□□□□□ -0.44
MCF2-207ENST00000483690 PMEPA1Q969W9 287 aa12.3□□□□□ -0.44
MCF2-207ENST00000483690 ZNF837Q96EG3 531 aaPredicted RBP12.3□□□□□ -0.44
MCF2-207ENST00000483690 PNMA5Q96PV4 448 aa12.3□□□□□ -0.44
MCF2-207ENST00000483690 BACH2Q9BYV9 841 aa12.3□□□□□ -0.44
MCF2-207ENST00000483690 GSX2Q9BZM3 304 aa12.3□□□□□ -0.44
MCF2-207ENST00000483690 MARK1Q9P0L2 795 aa12.3□□□□□ -0.44
MCF2-207ENST00000483690 SNRPBP14678 240 aaKnown RBP12.29□□□□□ -0.44
MCF2-207ENST00000483690 C1orf127Q8N9H9 656 aa12.29□□□□□ -0.44
MCF2-207ENST00000483690 ABHD17AQ96GS6 310 aa12.29□□□□□ -0.44
MCF2-207ENST00000483690 STRN4Q9NRL3 753 aa12.29□□□□□ -0.44
MCF2-207ENST00000483690 NDFIP2Q9NV92 336 aa12.29□□□□□ -0.44
MCF2-207ENST00000483690 NLRP2Q9NX02 1062 aa12.29□□□□□ -0.44
MCF2-207ENST00000483690 CNTN3Q9P232 1028 aa12.29□□□□□ -0.44
MCF2-207ENST00000483690 TARSP26639 723 aaKnown RBP12.28□□□□□ -0.44
MCF2-207ENST00000483690 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.28□□□□□ -0.44
MCF2-207ENST00000483690 GTPBP3Q969Y2 492 aaKnown RBP12.28□□□□□ -0.44
MCF2-207ENST00000483690 CHRDQ9H2X0 955 aa12.28□□□□□ -0.44
MCF2-207ENST00000483690 ATXN7L1Q9ULK2 861 aaPredicted RBP12.28□□□□□ -0.44
MCF2-207ENST00000483690 RARAP10276 462 aa12.27□□□□□ -0.45
MCF2-207ENST00000483690 CES1P23141 567 aa12.27□□□□□ -0.45
MCF2-207ENST00000483690 PHF24Q9UPV7 400 aa12.27□□□□□ -0.45
MCF2-207ENST00000483690 C11orf95C9JLR9 678 aaPredicted RBP12.26□□□□□ -0.45
MCF2-207ENST00000483690 EREGO14944 169 aa12.26□□□□□ -0.45
MCF2-207ENST00000483690 POLR3DP05423 398 aaPredicted RBP12.26□□□□□ -0.45
MCF2-207ENST00000483690 SPEM2Q0P670 501 aa12.26□□□□□ -0.45
MCF2-207ENST00000483690 FOXR1Q6PIV2 292 aa12.26□□□□□ -0.45
MCF2-207ENST00000483690 EPS8L3Q8TE67 593 aaKnown RBP12.26□□□□□ -0.45
MCF2-207ENST00000483690 EFCC1Q9HA90 598 aa12.26□□□□□ -0.45
MCF2-207ENST00000483690 AK5Q9Y6K8 562 aa12.26□□□□□ -0.45
MCF2-207ENST00000483690 CD33P20138 364 aa12.25□□□□□ -0.45
MCF2-207ENST00000483690 IRS1P35568 1242 aa12.25□□□□□ -0.45
MCF2-207ENST00000483690 GALNT12Q8IXK2 581 aa12.25□□□□□ -0.45
MCF2-207ENST00000483690 TRERF1Q96PN7 1200 aa12.25□□□□□ -0.45
MCF2-207ENST00000483690 NPHS2Q9NP85 383 aa12.25□□□□□ -0.45
MCF2-207ENST00000483690 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.25□□□□□ -0.45
MCF2-207ENST00000483690 PHF20L1A8MW92 1017 aa12.24□□□□□ -0.45
MCF2-207ENST00000483690 GIPC1O14908 333 aa12.24□□□□□ -0.45
MCF2-207ENST00000483690 MMP20O60882 483 aa12.24□□□□□ -0.45
MCF2-207ENST00000483690 NFKB1P19838 968 aa12.24□□□□□ -0.45
MCF2-207ENST00000483690 EIF4BP23588 611 aaKnown RBP12.24□□□□□ -0.45
MCF2-207ENST00000483690 GRIN2CQ14957 1233 aa12.24□□□□□ -0.45
MCF2-207ENST00000483690 PI16Q6UXB8 463 aa12.24□□□□□ -0.45
MCF2-207ENST00000483690 CDC14CA4D256 554 aa12.23□□□□□ -0.45
MCF2-207ENST00000483690 SCAMP3O14828 347 aaKnown RBP12.23□□□□□ -0.45
MCF2-207ENST00000483690 FGFR3P22607 806 aa12.23□□□□□ -0.45
MCF2-207ENST00000483690 NEUROD1Q13562 356 aa12.23□□□□□ -0.45
MCF2-207ENST00000483690 TMEM87AQ8NBN3 555 aa12.23□□□□□ -0.45
MCF2-207ENST00000483690 OR13H1Q8NG92 308 aa12.23□□□□□ -0.45
MCF2-207ENST00000483690 ZFATQ9P243 1243 aa12.23□□□□□ -0.45
MCF2-207ENST00000483690 PPFIA3O75145 1194 aa12.22□□□□□ -0.45
MCF2-207ENST00000483690 GADD45BO75293 160 aaPredicted RBP12.22□□□□□ -0.45
MCF2-207ENST00000483690 CYP2E1P05181 493 aaPredicted RBP12.22□□□□□ -0.45
MCF2-207ENST00000483690 BHMTQ93088 406 aa12.22□□□□□ -0.45
MCF2-207ENST00000483690 SLC30A3Q99726 388 aa12.22□□□□□ -0.45
MCF2-207ENST00000483690 KANSL3Q9P2N6 904 aa12.22□□□□□ -0.45
MCF2-207ENST00000483690 HCN2Q9UL51 889 aa12.22□□□□□ -0.45
MCF2-207ENST00000483690 PSAPP07602 524 aa12.21□□□□□ -0.45
MCF2-207ENST00000483690 EDN3P14138 238 aa12.21□□□□□ -0.45
MCF2-207ENST00000483690 FAM182BQ5T319 152 aa12.21□□□□□ -0.45
MCF2-207ENST00000483690 C12orf49Q9H741 205 aa12.21□□□□□ -0.45
MCF2-207ENST00000483690 MAP3K6O95382 1288 aa12.2□□□□□ -0.46
MCF2-207ENST00000483690 VEGFBP49765 207 aa12.2□□□□□ -0.46
MCF2-207ENST00000483690 RAB44Q7Z6P3 723 aaPredicted RBP12.2□□□□□ -0.46
MCF2-207ENST00000483690 CRELD1Q96HD1 420 aa12.2□□□□□ -0.46
MCF2-207ENST00000483690 TLR7Q9NYK1 1049 aaKnown RBP12.2□□□□□ -0.46
MCF2-207ENST00000483690 LCE2BO14633 110 aa12.19□□□□□ -0.46
MCF2-207ENST00000483690 LDLRAD1Q5T700 205 aa12.19□□□□□ -0.46
MCF2-207ENST00000483690 SV2AQ7L0J3 742 aa12.19□□□□□ -0.46
MCF2-207ENST00000483690 VWA5B2Q8N398 1253 aa12.19□□□□□ -0.46
MCF2-207ENST00000483690 OSBPL7Q9BZF2 842 aa12.19□□□□□ -0.46
MCF2-207ENST00000483690 GPR25O00155 361 aa12.18□□□□□ -0.46
MCF2-207ENST00000483690 SOX18P35713 384 aa12.18□□□□□ -0.46
MCF2-207ENST00000483690 PLAURQ03405 335 aa12.18□□□□□ -0.46
MCF2-207ENST00000483690 SRCIN1Q9C0H9 1055 aa12.18□□□□□ -0.46
MCF2-207ENST00000483690 DHX32Q7L7V1 743 aaKnown RBP12.17□□□□□ -0.46
MCF2-207ENST00000483690 BCO2Q9BYV7 579 aa12.17□□□□□ -0.46
MCF2-207ENST00000483690 SUV39H2Q9H5I1 410 aa12.17□□□□□ -0.46
MCF2-207ENST00000483690 FAM8A1Q9UBU6 413 aa12.17□□□□□ -0.46
MCF2-207ENST00000483690 SALL4Q9UJQ4 1053 aa12.17□□□□□ -0.46
MCF2-207ENST00000483690 PRR12Q9ULL5 1215 aa12.17□□□□□ -0.46
MCF2-207ENST00000483690 HYAL2Q12891 473 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms