RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 CHADLQ6NUI6 762 aa12□□□□□ -0.49
EPB41-208ENST00000460378 XDHP47989 1333 aa12□□□□□ -0.49
EPB41-208ENST00000460378 CT47B1P0C2W7 299 aaPredicted RBP12□□□□□ -0.49
EPB41-208ENST00000460378 UQCRFS1P1P0C7P4 283 aa12□□□□□ -0.49
EPB41-208ENST00000460378 PDE3AQ14432 1141 aa12□□□□□ -0.49
EPB41-208ENST00000460378 AMER1Q5JTC6 1135 aaPredicted RBP12□□□□□ -0.49
EPB41-208ENST00000460378 GIGYF2Q6Y7W6 1299 aaKnown RBP12□□□□□ -0.49
EPB41-208ENST00000460378 SLC5A4Q9NY91 659 aa12□□□□□ -0.49
EPB41-208ENST00000460378 AHDC1Q5TGY3 1603 aaPredicted RBP12□□□□□ -0.49
EPB41-208ENST00000460378 SRGAP3O43295 1099 aa12□□□□□ -0.49
EPB41-208ENST00000460378 CDC37L1Q7L3B6 337 aa12□□□□□ -0.49
EPB41-208ENST00000460378 LDHBP07195 334 aaKnown RBP12□□□□□ -0.49
EPB41-208ENST00000460378 CYP19A1P11511 503 aaPredicted RBP12□□□□□ -0.49
EPB41-208ENST00000460378 TTLL5Q6EMB2 1281 aa12□□□□□ -0.49
EPB41-208ENST00000460378 ZNRF3Q9ULT6 936 aa12□□□□□ -0.49
EPB41-208ENST00000460378 GNL2Q13823 731 aaKnown RBP11.99□□□□□ -0.49
EPB41-208ENST00000460378 MYO3BQ8WXR4 1341 aa11.99□□□□□ -0.49
EPB41-208ENST00000460378 GTF2IP78347 998 aa11.99□□□□□ -0.49
EPB41-208ENST00000460378 ZNF827Q17R98 1081 aa11.99□□□□□ -0.49
EPB41-208ENST00000460378 DIAPH3Q9NSV4 1193 aa11.99□□□□□ -0.49
EPB41-208ENST00000460378 ALDH1L1O75891 902 aa11.99□□□□□ -0.49
EPB41-208ENST00000460378 MAP2K1Q02750 393 aaPredicted RBP11.99□□□□□ -0.49
EPB41-208ENST00000460378 GRAPQ13588 217 aa11.99□□□□□ -0.49
EPB41-208ENST00000460378 DEFB115Q30KQ5 88 aa11.99□□□□□ -0.49
EPB41-208ENST00000460378 TBC1D9BQ66K14 1250 aa11.99□□□□□ -0.49
EPB41-208ENST00000460378 LINS1Q8NG48 757 aa11.99□□□□□ -0.49
EPB41-208ENST00000460378 GRAPLQ8TC17 118 aaPredicted RBP11.99□□□□□ -0.49
EPB41-208ENST00000460378 DBNDD1Q9H9R9 158 aa11.99□□□□□ -0.49
EPB41-208ENST00000460378 SREBF2Q12772 1141 aa11.99□□□□□ -0.49
EPB41-208ENST00000460378 USP42Q9H9J4 1324 aaKnown RBP11.98□□□□□ -0.49
EPB41-208ENST00000460378 USP17L8P0C7I0 530 aa11.98□□□□□ -0.49
EPB41-208ENST00000460378 LMBR1LQ6UX01 489 aa11.98□□□□□ -0.49
EPB41-208ENST00000460378 IRX3P78415 501 aaPredicted RBP11.98□□□□□ -0.49
EPB41-208ENST00000460378 TBC1D10BQ4KMP7 808 aaPredicted RBP11.98□□□□□ -0.49
EPB41-208ENST00000460378 RSPH6AQ9H0K4 717 aa11.98□□□□□ -0.49
EPB41-208ENST00000460378 IRX6P78412 446 aaPredicted RBP11.98□□□□□ -0.49
EPB41-208ENST00000460378 WDR66Q8TBY9 1149 aa11.98□□□□□ -0.49
EPB41-208ENST00000460378 RUFY2Q8WXA3 655 aa11.98□□□□□ -0.49
EPB41-208ENST00000460378 B4DLN1 442 aa11.97□□□□□ -0.49
EPB41-208ENST00000460378 MRPL12P52815 198 aaKnown RBP11.97□□□□□ -0.49
EPB41-208ENST00000460378 PICALMQ13492 652 aa11.97□□□□□ -0.49
EPB41-208ENST00000460378 APOBEC3FQ8IUX4 373 aaKnown RBP11.97□□□□□ -0.49
EPB41-208ENST00000460378 LEMD3Q9Y2U8 911 aa11.97□□□□□ -0.49
EPB41-208ENST00000460378 RNF123Q5XPI4 1314 aa11.97□□□□□ -0.49
EPB41-208ENST00000460378 USP17L3A6NCW0 530 aa11.97□□□□□ -0.49
EPB41-208ENST00000460378 USP17L4A6NCW7 530 aa11.97□□□□□ -0.49
EPB41-208ENST00000460378 USP17L1Q7RTZ2 530 aa11.97□□□□□ -0.49
EPB41-208ENST00000460378 TMEM87AQ8NBN3 555 aa11.97□□□□□ -0.49
EPB41-208ENST00000460378 MKNK2Q9HBH9 465 aa11.97□□□□□ -0.49
EPB41-208ENST00000460378 AS3MTQ9HBK9 375 aa11.97□□□□□ -0.49
EPB41-208ENST00000460378 BCL9LQ86UU0 1499 aa11.97□□□□□ -0.49
EPB41-208ENST00000460378 GYS1P13807 737 aa11.97□□□□□ -0.49
EPB41-208ENST00000460378 KIAA0825Q8IV33 1275 aa11.97□□□□□ -0.49
EPB41-208ENST00000460378 TRPM1Q7Z4N2 1603 aa11.97□□□□□ -0.49
EPB41-208ENST00000460378 CCDC102AQ96A19 550 aa11.96□□□□□ -0.49
EPB41-208ENST00000460378 PHACTR3Q96KR7 559 aa11.96□□□□□ -0.49
EPB41-208ENST00000460378 MBIPQ9NS73 344 aa11.96□□□□□ -0.49
EPB41-208ENST00000460378 PNPLA7Q6ZV29 1317 aa11.96□□□□□ -0.49
EPB41-208ENST00000460378 ITGA6P23229 1130 aa11.96□□□□□ -0.49
EPB41-208ENST00000460378 ATP2B3Q16720 1220 aa11.96□□□□□ -0.49
EPB41-208ENST00000460378 PPP4R3BQ5MIZ7 849 aa11.96□□□□□ -0.49
EPB41-208ENST00000460378 IL17REQ8NFR9 667 aa11.96□□□□□ -0.49
EPB41-208ENST00000460378 TEKT1Q969V4 418 aa11.96□□□□□ -0.49
EPB41-208ENST00000460378 METTL22Q9BUU2 404 aaPredicted RBP11.96□□□□□ -0.49
EPB41-208ENST00000460378 RCAN3Q9UKA8 241 aa11.96□□□□□ -0.49
EPB41-208ENST00000460378 IQSEC3Q9UPP2 1182 aaPredicted RBP11.96□□□□□ -0.49
EPB41-208ENST00000460378 SLIT2O94813 1529 aa11.96□□□□□ -0.49
EPB41-208ENST00000460378 KRI1Q8N9T8 703 aaKnown RBP11.96□□□□□ -0.49
EPB41-208ENST00000460378 CCDC43Q96MW1 224 aaKnown RBP11.96□□□□□ -0.49
EPB41-208ENST00000460378 NWD1Q149M9 1564 aa11.96□□□□□ -0.5
EPB41-208ENST00000460378 ITPK1Q13572 414 aa11.96□□□□□ -0.5
EPB41-208ENST00000460378 SH2D4AQ9H788 454 aa11.96□□□□□ -0.5
EPB41-208ENST00000460378 ANGEL1Q9UNK9 670 aaKnown RBP11.96□□□□□ -0.5
EPB41-208ENST00000460378 HELBQ8NG08 1087 aaPredicted RBP11.95□□□□□ -0.5
EPB41-208ENST00000460378 FMNL1O95466 1100 aaPredicted RBP11.95□□□□□ -0.5
EPB41-208ENST00000460378 EIF4A1P60842 406 aaKnown RBP11.95□□□□□ -0.5
EPB41-208ENST00000460378 MKRN3Q13064 507 aaKnown RBP11.95□□□□□ -0.5
EPB41-208ENST00000460378 AOC3Q16853 763 aa11.95□□□□□ -0.5
EPB41-208ENST00000460378 PRR5LQ6MZQ0 368 aa11.95□□□□□ -0.5
EPB41-208ENST00000460378 NBPF11Q86T75 865 aa11.95□□□□□ -0.5
EPB41-208ENST00000460378 CHMP4BP1P59074 171 aa11.95□□□□□ -0.5
EPB41-208ENST00000460378 SART3Q15020 963 aaKnown RBP11.95□□□□□ -0.5
EPB41-208ENST00000460378 TTLL7Q6ZT98 887 aa11.95□□□□□ -0.5
EPB41-208ENST00000460378 RILPL2Q969X0 211 aa11.95□□□□□ -0.5
EPB41-208ENST00000460378 DENND2AQ9ULE3 1009 aa11.95□□□□□ -0.5
EPB41-208ENST00000460378 PXDNQ92626 1479 aa11.95□□□□□ -0.5
EPB41-208ENST00000460378 TDO2P48775 406 aa11.95□□□□□ -0.5
EPB41-208ENST00000460378 LDHDQ86WU2 507 aa11.95□□□□□ -0.5
EPB41-208ENST00000460378 CRAMP1Q96RY5 1269 aa11.95□□□□□ -0.5
EPB41-208ENST00000460378 ADARB2Q9NS39 739 aaKnown RBP11.95□□□□□ -0.5
EPB41-208ENST00000460378 TTF2Q9UNY4 1162 aaKnown RBP11.95□□□□□ -0.5
EPB41-208ENST00000460378 GRM8O00222 908 aa11.94□□□□□ -0.5
EPB41-208ENST00000460378 NKX1-1Q15270 411 aaPredicted RBP11.94□□□□□ -0.5
EPB41-208ENST00000460378 CNOT7Q9UIV1 285 aaKnown RBP11.94□□□□□ -0.5
EPB41-208ENST00000460378 RASSF7Q02833 373 aa11.94□□□□□ -0.5
EPB41-208ENST00000460378 NCAPD2Q15021 1401 aa11.94□□□□□ -0.5
EPB41-208ENST00000460378 ZNF444Q8N0Y2 327 aaPredicted RBP11.94□□□□□ -0.5
EPB41-208ENST00000460378 RBM27Q9P2N5 1060 aaKnown RBP11.94□□□□□ -0.5
EPB41-208ENST00000460378 KIF4BQ2VIQ3 1234 aa11.94□□□□□ -0.5
EPB41-208ENST00000460378 SP8Q8IXZ3 490 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms