RNA–Protein interactions for RNA: ENST00000458304.2

SPARCL1-204, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-204ENST00000458304 PLCD4Q9BRC7 762 aa6.39□□□□□ -1.39
SPARCL1-204ENST00000458304 IRF2BPLQ9H1B7 796 aa6.39□□□□□ -1.39
SPARCL1-204ENST00000458304 MRS2Q9HD23 443 aa6.39□□□□□ -1.39
SPARCL1-204ENST00000458304 PCDH12Q9NPG4 1184 aa6.39□□□□□ -1.39
SPARCL1-204ENST00000458304 TERF2IPQ9NYB0 399 aa6.39□□□□□ -1.39
SPARCL1-204ENST00000458304 STK17AQ9UEE5 414 aa6.39□□□□□ -1.39
SPARCL1-204ENST00000458304 DMGDHQ9UI17 866 aaKnown RBP6.39□□□□□ -1.39
SPARCL1-204ENST00000458304 CHIC2Q9UKJ5 165 aa6.39□□□□□ -1.39
SPARCL1-204ENST00000458304 FGD6Q6ZV73 1430 aa6.39□□□□□ -1.39
SPARCL1-204ENST00000458304 ABCC2Q92887 1545 aa6.39□□□□□ -1.39
SPARCL1-204ENST00000458304 ABCA8O94911 1581 aa6.39□□□□□ -1.39
SPARCL1-204ENST00000458304 ADCY10Q96PN6 1610 aa6.39□□□□□ -1.39
SPARCL1-204ENST00000458304 ZNF76P36508 570 aa6.38□□□□□ -1.39
SPARCL1-204ENST00000458304 ARHGAP4P98171 946 aa6.38□□□□□ -1.39
SPARCL1-204ENST00000458304 FGD1P98174 961 aa6.38□□□□□ -1.39
SPARCL1-204ENST00000458304 XPCQ01831 940 aaPredicted RBP6.38□□□□□ -1.39
SPARCL1-204ENST00000458304 ARID5AQ03989 594 aa6.38□□□□□ -1.39
SPARCL1-204ENST00000458304 BMS1Q14692 1282 aaKnown RBP6.38□□□□□ -1.39
SPARCL1-204ENST00000458304 PLEKHG6Q3KR16 790 aa6.38□□□□□ -1.39
SPARCL1-204ENST00000458304 TSGA10IPQ3SY00 556 aa6.38□□□□□ -1.39
SPARCL1-204ENST00000458304 LYSMD3Q7Z3D4 306 aa6.38□□□□□ -1.39
SPARCL1-204ENST00000458304 CYP2U1Q7Z449 544 aa6.38□□□□□ -1.39
SPARCL1-204ENST00000458304 GABBR1Q9UBS5 961 aa6.38□□□□□ -1.39
SPARCL1-204ENST00000458304 CFDP1Q9UEE9 299 aaPredicted RBP6.38□□□□□ -1.39
SPARCL1-204ENST00000458304 MRPL42Q9Y6G3 142 aaKnown RBP6.38□□□□□ -1.39
SPARCL1-204ENST00000458304 NUP153P49790 1475 aaKnown RBP6.38□□□□□ -1.39
SPARCL1-204ENST00000458304 PTPN23Q9H3S7 1636 aa6.38□□□□□ -1.39
SPARCL1-204ENST00000458304 LRRIQ1Q96JM4 1722 aa6.37□□□□□ -1.39
SPARCL1-204ENST00000458304 CDK13Q14004 1512 aaKnown RBP6.37□□□□□ -1.39
SPARCL1-204ENST00000458304 UHRF1BP1LA0JNW5 1464 aa6.37□□□□□ -1.39
SPARCL1-204ENST00000458304 PLB1Q6P1J6 1458 aa6.37□□□□□ -1.39
SPARCL1-204ENST00000458304 PLEKHH2Q8IVE3 1493 aa6.37□□□□□ -1.39
SPARCL1-204ENST00000458304 S100BP04271 92 aaPredicted RBP6.37□□□□□ -1.39
SPARCL1-204ENST00000458304 TSPY4P0CV99 314 aa6.37□□□□□ -1.39
SPARCL1-204ENST00000458304 TSPY10P0CW01 314 aa6.37□□□□□ -1.39
SPARCL1-204ENST00000458304 PTMSP20962 102 aa6.37□□□□□ -1.39
SPARCL1-204ENST00000458304 KRT76Q01546 638 aa6.37□□□□□ -1.39
SPARCL1-204ENST00000458304 DPYDQ12882 1025 aa6.37□□□□□ -1.39
SPARCL1-204ENST00000458304 SF3B2Q13435 895 aaKnown RBP6.37□□□□□ -1.39
SPARCL1-204ENST00000458304 ECM1Q16610 540 aa6.37□□□□□ -1.39
SPARCL1-204ENST00000458304 FILIP1Q7Z7B0 1213 aa6.37□□□□□ -1.39
SPARCL1-204ENST00000458304 CCDC146Q8IYE0 955 aa6.37□□□□□ -1.39
SPARCL1-204ENST00000458304 SPOCK3Q9BQ16 436 aa6.37□□□□□ -1.39
SPARCL1-204ENST00000458304 IFT57Q9NWB7 429 aa6.37□□□□□ -1.39
SPARCL1-204ENST00000458304 SETD5Q9C0A6 1442 aa6.36□□□□□ -1.39
SPARCL1-204ENST00000458304 PHLDB1Q86UU1 1377 aa6.36□□□□□ -1.39
SPARCL1-204ENST00000458304 MEN1O00255 615 aa6.36□□□□□ -1.39
SPARCL1-204ENST00000458304 PRMT3O60678 531 aa6.36□□□□□ -1.39
SPARCL1-204ENST00000458304 ITGA6P23229 1130 aa6.36□□□□□ -1.39
SPARCL1-204ENST00000458304 TNNI2P48788 182 aa6.36□□□□□ -1.39
SPARCL1-204ENST00000458304 CLN3Q13286 438 aa6.36□□□□□ -1.39
SPARCL1-204ENST00000458304 NFE2L2Q16236 605 aa6.36□□□□□ -1.39
SPARCL1-204ENST00000458304 ZSCAN1Q8NBB4 408 aa6.36□□□□□ -1.39
SPARCL1-204ENST00000458304 GRIP2Q9C0E4 1043 aa6.36□□□□□ -1.39
SPARCL1-204ENST00000458304 CXXC1Q9P0U4 656 aaPredicted RBP6.36□□□□□ -1.39
SPARCL1-204ENST00000458304 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.36□□□□□ -1.39
SPARCL1-204ENST00000458304 LAS1LQ9Y4W2 734 aaKnown RBP6.36□□□□□ -1.39
SPARCL1-204ENST00000458304 SORBS3O60504 671 aa6.35□□□□□ -1.39
SPARCL1-204ENST00000458304 DNAJC6O75061 913 aa6.35□□□□□ -1.39
SPARCL1-204ENST00000458304 PPFIA4O75335 1185 aa6.35□□□□□ -1.39
SPARCL1-204ENST00000458304 GNRH1P01148 92 aa6.35□□□□□ -1.39
SPARCL1-204ENST00000458304 IL2RAP01589 272 aa6.35□□□□□ -1.39
SPARCL1-204ENST00000458304 XRCC5P13010 732 aaKnown RBP6.35□□□□□ -1.39
SPARCL1-204ENST00000458304 FKBP4Q02790 459 aaKnown RBP eCLIP6.35□□□□□ -1.39
SPARCL1-204ENST00000458304 NCOA4Q13772 614 aa6.35□□□□□ -1.39
SPARCL1-204ENST00000458304 OCLNQ16625 522 aa6.35□□□□□ -1.39
SPARCL1-204ENST00000458304 PRICKLE2Q7Z3G6 844 aa6.35□□□□□ -1.39
SPARCL1-204ENST00000458304 RPUSD2Q8IZ73 545 aaKnown RBP6.35□□□□□ -1.39
SPARCL1-204ENST00000458304 GTF3C2Q8WUA4 911 aaPredicted RBP6.35□□□□□ -1.39
SPARCL1-204ENST00000458304 SGSM3Q96HU1 749 aa6.35□□□□□ -1.39
SPARCL1-204ENST00000458304 FAM161BQ96MY7 647 aa6.35□□□□□ -1.39
SPARCL1-204ENST00000458304 ARHGEF10LQ9HCE6 1279 aa6.35□□□□□ -1.39
SPARCL1-204ENST00000458304 PARP2Q9UGN5 583 aa6.35□□□□□ -1.39
SPARCL1-204ENST00000458304 INPP5FQ9Y2H2 1132 aa6.35□□□□□ -1.39
SPARCL1-204ENST00000458304 HRH3Q9Y5N1 445 aa6.35□□□□□ -1.39
SPARCL1-204ENST00000458304 MYO5CQ9NQX4 1742 aa6.34□□□□□ -1.39
SPARCL1-204ENST00000458304 PRPF40AO75400 957 aaKnown RBP6.34□□□□□ -1.39
SPARCL1-204ENST00000458304 STK10O94804 968 aaKnown RBP6.34□□□□□ -1.39
SPARCL1-204ENST00000458304 RHOQP17081 205 aa6.34□□□□□ -1.39
SPARCL1-204ENST00000458304 SLFNL1Q499Z3 407 aa6.34□□□□□ -1.39
SPARCL1-204ENST00000458304 TMC4Q7Z404 712 aa6.34□□□□□ -1.39
SPARCL1-204ENST00000458304 OGFOD1Q8N543 542 aa6.34□□□□□ -1.39
SPARCL1-204ENST00000458304 MRFAP1L1Q96HT8 127 aa6.34□□□□□ -1.39
SPARCL1-204ENST00000458304 CCDC136Q96JN2 1154 aa6.34□□□□□ -1.39
SPARCL1-204ENST00000458304 SPC25Q9HBM1 224 aa6.34□□□□□ -1.39
SPARCL1-204ENST00000458304 DDX56Q9NY93 547 aaKnown RBP6.34□□□□□ -1.39
SPARCL1-204ENST00000458304 VTI1BQ9UEU0 232 aa6.34□□□□□ -1.39
SPARCL1-204ENST00000458304 G3BP2Q9UN86 482 aaKnown RBP6.34□□□□□ -1.39
SPARCL1-204ENST00000458304 ATP10BO94823 1461 aa6.34□□□□□ -1.4
SPARCL1-204ENST00000458304 TCOF1Q13428 1488 aaKnown RBP6.34□□□□□ -1.4
SPARCL1-204ENST00000458304 CFAP74Q9C0B2 1584 aa6.33□□□□□ -1.4
SPARCL1-204ENST00000458304 SPATA31C2B4DYI2 1134 aa6.33□□□□□ -1.4
SPARCL1-204ENST00000458304 ENPP3O14638 875 aa6.33□□□□□ -1.4
SPARCL1-204ENST00000458304 SH3BP5O60239 455 aa6.33□□□□□ -1.4
SPARCL1-204ENST00000458304 LDHBP07195 334 aaKnown RBP6.33□□□□□ -1.4
SPARCL1-204ENST00000458304 TBX4P57082 545 aa6.33□□□□□ -1.4
SPARCL1-204ENST00000458304 FMR1Q06787 632 aaKnown RBP eCLIP6.33□□□□□ -1.4
SPARCL1-204ENST00000458304 PDE3BQ13370 1112 aa6.33□□□□□ -1.4
SPARCL1-204ENST00000458304 LONRF3Q496Y0 759 aa6.33□□□□□ -1.4
SPARCL1-204ENST00000458304 TSHZ1Q6ZSZ6 1077 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms