RNA–Protein interactions for RNA: ENST00000454642.3

CDH19-202, Transcript of cadherin 19, humanhuman

TSL 5

Gene CDH19, Length 1,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-202ENST00000454642 ELP3Q9H9T3 547 aa8.22□□□□□ -1.09
CDH19-202ENST00000454642 PCDHGB7Q9Y5F8 929 aa8.22□□□□□ -1.09
CDH19-202ENST00000454642 ZNF394Q53GI3 561 aa8.21□□□□□ -1.09
CDH19-202ENST00000454642 CEP63Q96MT8 703 aa8.21□□□□□ -1.09
CDH19-202ENST00000454642 TGIF2Q9GZN2 237 aa8.21□□□□□ -1.09
CDH19-202ENST00000454642 NPHS2Q9NP85 383 aa8.21□□□□□ -1.09
CDH19-202ENST00000454642 GJA3Q9Y6H8 435 aa8.21□□□□□ -1.09
CDH19-202ENST00000454642 A0A1W2PNR3 127 aa8.21□□□□□ -1.1
CDH19-202ENST00000454642 PDE12Q6L8Q7 609 aaKnown RBP8.21□□□□□ -1.1
CDH19-202ENST00000454642 ZFYVE28Q9HCC9 887 aa8.21□□□□□ -1.1
CDH19-202ENST00000454642 GPC6Q9Y625 555 aaPredicted RBP8.21□□□□□ -1.1
CDH19-202ENST00000454642 NCAPD3P42695 1498 aa8.21□□□□□ -1.1
CDH19-202ENST00000454642 A0A1B0GTH6 734 aa8.2□□□□□ -1.1
CDH19-202ENST00000454642 TTLL8A6PVC2 850 aa8.2□□□□□ -1.1
CDH19-202ENST00000454642 XYLBO75191 536 aa8.2□□□□□ -1.1
CDH19-202ENST00000454642 BMP1P13497 986 aa8.2□□□□□ -1.1
CDH19-202ENST00000454642 GRNP28799 593 aaKnown RBP8.2□□□□□ -1.1
CDH19-202ENST00000454642 MEI1Q5TIA1 1274 aa8.2□□□□□ -1.1
CDH19-202ENST00000454642 MRPL14Q6P1L8 145 aaKnown RBP8.2□□□□□ -1.1
CDH19-202ENST00000454642 UBXN4Q92575 508 aa8.2□□□□□ -1.1
CDH19-202ENST00000454642 FRMD6Q96NE9 622 aa8.2□□□□□ -1.1
CDH19-202ENST00000454642 TINF2Q9BSI4 451 aa8.2□□□□□ -1.1
CDH19-202ENST00000454642 TANGO6Q9C0B7 1094 aa8.2□□□□□ -1.1
CDH19-202ENST00000454642 RUBCNLQ9H714 662 aa8.2□□□□□ -1.1
CDH19-202ENST00000454642 C12orf49Q9H741 205 aa8.2□□□□□ -1.1
CDH19-202ENST00000454642 XKR5Q6UX68 686 aa8.19□□□□□ -1.1
CDH19-202ENST00000454642 GMPR2Q9P2T1 348 aaKnown RBP8.19□□□□□ -1.1
CDH19-202ENST00000454642 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.19□□□□□ -1.1
CDH19-202ENST00000454642 HMGXB3Q12766 1538 aa8.18□□□□□ -1.1
CDH19-202ENST00000454642 TYRO3Q06418 890 aa8.18□□□□□ -1.1
CDH19-202ENST00000454642 NXPE4Q6UWF7 544 aa8.18□□□□□ -1.1
CDH19-202ENST00000454642 TREML4Q6UXN2 200 aa8.18□□□□□ -1.1
CDH19-202ENST00000454642 C1orf127Q8N9H9 656 aa8.18□□□□□ -1.1
CDH19-202ENST00000454642 CNTN3Q9P232 1028 aa8.18□□□□□ -1.1
CDH19-202ENST00000454642 ERCC6Q03468 1493 aa8.18□□□□□ -1.1
CDH19-202ENST00000454642 EREGO14944 169 aa8.18□□□□□ -1.1
CDH19-202ENST00000454642 GADD45BO75293 160 aaPredicted RBP8.18□□□□□ -1.1
CDH19-202ENST00000454642 EPB42P16452 691 aa8.18□□□□□ -1.1
CDH19-202ENST00000454642 WDR44Q5JSH3 913 aa8.18□□□□□ -1.1
CDH19-202ENST00000454642 GAS2L1Q99501 681 aaPredicted RBP8.18□□□□□ -1.1
CDH19-202ENST00000454642 USP17L7P0C7H9 530 aa8.17□□□□□ -1.1
CDH19-202ENST00000454642 RACK1P63244 317 aaKnown RBP8.17□□□□□ -1.1
CDH19-202ENST00000454642 USP48Q86UV5 1035 aa8.17□□□□□ -1.1
CDH19-202ENST00000454642 BRD7Q9NPI1 651 aa8.17□□□□□ -1.1
CDH19-202ENST00000454642 PRKAG2Q9UGJ0 569 aa8.17□□□□□ -1.1
CDH19-202ENST00000454642 GGT7Q9UJ14 662 aa8.17□□□□□ -1.1
CDH19-202ENST00000454642 DNAJA1P31689 397 aaKnown RBP8.16□□□□□ -1.1
CDH19-202ENST00000454642 HS2ST1Q7LGA3 356 aa8.16□□□□□ -1.1
CDH19-202ENST00000454642 BCO2Q9BYV7 579 aa8.16□□□□□ -1.1
CDH19-202ENST00000454642 ZCCHC2Q9C0B9 1178 aaKnown RBP8.16□□□□□ -1.1
CDH19-202ENST00000454642 CHRDQ9H2X0 955 aa8.16□□□□□ -1.1
CDH19-202ENST00000454642 ABI2Q9NYB9 513 aaPredicted RBP8.16□□□□□ -1.1
CDH19-202ENST00000454642 SMARCA2P51531 1590 aa8.15□□□□□ -1.1
CDH19-202ENST00000454642 SCARF1Q14162 830 aa8.15□□□□□ -1.1
CDH19-202ENST00000454642 KRT25Q7Z3Z0 450 aa8.15□□□□□ -1.1
CDH19-202ENST00000454642 PGBD3Q8N328 593 aa8.15□□□□□ -1.1
CDH19-202ENST00000454642 DNAJC2Q99543 621 aaKnown RBP8.15□□□□□ -1.1
CDH19-202ENST00000454642 FAM8A1Q9UBU6 413 aa8.15□□□□□ -1.1
CDH19-202ENST00000454642 DDX41Q9UJV9 622 aaKnown RBP8.15□□□□□ -1.1
CDH19-202ENST00000454642 INPP5FQ9Y2H2 1132 aa8.15□□□□□ -1.1
CDH19-202ENST00000454642 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.15□□□□□ -1.1
CDH19-202ENST00000454642 C11orf95C9JLR9 678 aaPredicted RBP8.14□□□□□ -1.11
CDH19-202ENST00000454642 TAF1CQ15572 869 aaPredicted RBP8.14□□□□□ -1.11
CDH19-202ENST00000454642 KANSL3Q9P2N6 904 aa8.14□□□□□ -1.11
CDH19-202ENST00000454642 SOS2Q07890 1332 aaPredicted RBP8.14□□□□□ -1.11
CDH19-202ENST00000454642 GIPC1O14908 333 aa8.14□□□□□ -1.11
CDH19-202ENST00000454642 SASH3O75995 380 aa8.14□□□□□ -1.11
CDH19-202ENST00000454642 CES1P23141 567 aa8.14□□□□□ -1.11
CDH19-202ENST00000454642 GNL2Q13823 731 aaKnown RBP8.14□□□□□ -1.11
CDH19-202ENST00000454642 TTC39BQ5VTQ0 682 aaPredicted RBP8.14□□□□□ -1.11
CDH19-202ENST00000454642 DHX38Q92620 1227 aaKnown RBP8.14□□□□□ -1.11
CDH19-202ENST00000454642 ATP13A2Q9NQ11 1180 aa8.14□□□□□ -1.11
CDH19-202ENST00000454642 LATS2Q9NRM7 1088 aa8.14□□□□□ -1.11
CDH19-202ENST00000454642 USP31Q70CQ4 1352 aa8.13□□□□□ -1.11
CDH19-202ENST00000454642 CYP2E1P05181 493 aaPredicted RBP8.13□□□□□ -1.11
CDH19-202ENST00000454642 GRM2Q14416 872 aa8.13□□□□□ -1.11
CDH19-202ENST00000454642 NLRP13Q86W25 1043 aa8.13□□□□□ -1.11
CDH19-202ENST00000454642 ZNF654Q8IZM8 581 aa8.13□□□□□ -1.11
CDH19-202ENST00000454642 FAM177A1Q8N128 213 aaPredicted RBP8.13□□□□□ -1.11
CDH19-202ENST00000454642 F11P03951 625 aa8.12□□□□□ -1.11
CDH19-202ENST00000454642 GTF2F1P35269 517 aaKnown RBP eCLIP8.12□□□□□ -1.11
CDH19-202ENST00000454642 GALNT12Q8IXK2 581 aa8.12□□□□□ -1.11
CDH19-202ENST00000454642 ZFP42Q96MM3 310 aa8.12□□□□□ -1.11
CDH19-202ENST00000454642 CRISPLD1Q9H336 500 aa8.12□□□□□ -1.11
CDH19-202ENST00000454642 SMARCA5O60264 1052 aaPredicted RBP8.11□□□□□ -1.11
CDH19-202ENST00000454642 ATP2B1P20020 1258 aa8.11□□□□□ -1.11
CDH19-202ENST00000454642 TARSP26639 723 aaKnown RBP8.11□□□□□ -1.11
CDH19-202ENST00000454642 TRIM46Q7Z4K8 759 aa8.11□□□□□ -1.11
CDH19-202ENST00000454642 SRA1Q9HD15 236 aaKnown RBP8.11□□□□□ -1.11
CDH19-202ENST00000454642 COPRSQ9NQ92 184 aa8.11□□□□□ -1.11
CDH19-202ENST00000454642 DNMT3LQ9UJW3 386 aa8.11□□□□□ -1.11
CDH19-202ENST00000454642 ATAD2BQ9ULI0 1458 aa8.11□□□□□ -1.11
CDH19-202ENST00000454642 F6X3S4 739 aa8.11□□□□□ -1.11
CDH19-202ENST00000454642 NFX1Q12986 1120 aaKnown RBP8.11□□□□□ -1.11
CDH19-202ENST00000454642 SLC43A3Q8NBI5 491 aa8.11□□□□□ -1.11
CDH19-202ENST00000454642 TRIM47Q96LD4 638 aa8.11□□□□□ -1.11
CDH19-202ENST00000454642 EHD4Q9H223 541 aa8.11□□□□□ -1.11
CDH19-202ENST00000454642 DYRK1BQ9Y463 629 aa8.11□□□□□ -1.11
CDH19-202ENST00000454642 THOC2Q8NI27 1593 aaKnown RBP8.1□□□□□ -1.11
CDH19-202ENST00000454642 DCDC2BA2VCK2 349 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms