RNA–Protein interactions for RNA: ENST00000454642.3

CDH19-202, Transcript of cadherin 19, humanhuman

TSL 5

Gene CDH19, Length 1,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-202ENST00000454642 AEBP2Q6ZN18 517 aaPredicted RBP22.74■■□□□ 1.23
CDH19-202ENST00000454642 CHIC1Q5VXU3 224 aa21.63■■□□□ 1.05
CDH19-202ENST00000454642 SENP3Q9H4L4 574 aaPredicted RBP19.4■□□□□ 0.7
CDH19-202ENST00000454642 PHF23Q9BUL5 403 aaPredicted RBP19.13■□□□□ 0.65
CDH19-202ENST00000454642 FOXD1Q16676 465 aa18.06■□□□□ 0.48
CDH19-202ENST00000454642 PLPPR3Q6T4P5 718 aa17.29■□□□□ 0.36
CDH19-202ENST00000454642 MSH5O43196 834 aa16.91■□□□□ 0.3
CDH19-202ENST00000454642 PPP6R1Q9UPN7 881 aa16.91■□□□□ 0.3
CDH19-202ENST00000454642 PIAS4Q8N2W9 510 aaPredicted RBP16.86■□□□□ 0.29
CDH19-202ENST00000454642 ADRA2BP18089 450 aa16.83■□□□□ 0.28
CDH19-202ENST00000454642 POTEDQ86YR6 584 aa16.44■□□□□ 0.22
CDH19-202ENST00000454642 KCNA4P22459 653 aa15.7■□□□□ 0.1
CDH19-202ENST00000454642 EHMT2Q96KQ7 1210 aa15.48■□□□□ 0.07
CDH19-202ENST00000454642 MAPK8IP2Q13387 824 aaPredicted RBP15.44■□□□□ 0.06
CDH19-202ENST00000454642 SCAF1Q9H7N4 1312 aaKnown RBP15.42■□□□□ 0.06
CDH19-202ENST00000454642 DMRT2Q9Y5R5 561 aa15.4■□□□□ 0.06
CDH19-202ENST00000454642 PPP4R3CPQ6ZMV5 832 aa15.24■□□□□ 0.03
CDH19-202ENST00000454642 SLC4A1APQ9BWU0 796 aaKnown RBP15.03■□□□□ -0
CDH19-202ENST00000454642 NCBP3Q53F19 620 aaKnown RBP14.98□□□□□ -0.01
CDH19-202ENST00000454642 CSRNP3Q8WYN3 585 aa14.9□□□□□ -0.02
CDH19-202ENST00000454642 CNKSR2Q8WXI2 1034 aa14.87□□□□□ -0.03
CDH19-202ENST00000454642 HOXD11P31277 338 aaPredicted RBP14.86□□□□□ -0.03
CDH19-202ENST00000454642 NPM3O75607 178 aaKnown RBP14.82□□□□□ -0.04
CDH19-202ENST00000454642 RNF216Q9NWF9 866 aaPredicted RBP14.74□□□□□ -0.05
CDH19-202ENST00000454642 DCAF8L1A6NGE4 600 aa14.65□□□□□ -0.06
CDH19-202ENST00000454642 ZBTB22O15209 634 aa14.46□□□□□ -0.09
CDH19-202ENST00000454642 RNF39Q9H2S5 420 aa14.44□□□□□ -0.1
CDH19-202ENST00000454642 CACNB1Q02641 598 aaPredicted RBP14.43□□□□□ -0.1
CDH19-202ENST00000454642 DNAJC5BQ9UF47 199 aa14.39□□□□□ -0.11
CDH19-202ENST00000454642 C1QBPQ07021 282 aaKnown RBP14.23□□□□□ -0.13
CDH19-202ENST00000454642 FOXD4L1Q9NU39 408 aa14.18□□□□□ -0.14
CDH19-202ENST00000454642 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.07□□□□□ -0.16
CDH19-202ENST00000454642 SLC4A2P04920 1241 aa13.84□□□□□ -0.19
CDH19-202ENST00000454642 U3KPZ7 1027 aaPredicted RBP13.84□□□□□ -0.19
CDH19-202ENST00000454642 MYCNP04198 464 aaPredicted RBP13.63□□□□□ -0.23
CDH19-202ENST00000454642 SPINK5Q9NQ38 1064 aaPredicted RBP13.6□□□□□ -0.23
CDH19-202ENST00000454642 CAPN15O75808 1086 aa13.54□□□□□ -0.24
CDH19-202ENST00000454642 ATXN8OSP0DMR3 200 aa13.54□□□□□ -0.24
CDH19-202ENST00000454642 DSG3P32926 999 aa13.52□□□□□ -0.25
CDH19-202ENST00000454642 FKBP8Q14318 412 aa13.46□□□□□ -0.26
CDH19-202ENST00000454642 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.44□□□□□ -0.26
CDH19-202ENST00000454642 HNRNPUL2Q1KMD3 747 aaKnown RBP13.44□□□□□ -0.26
CDH19-202ENST00000454642 RTN4Q9NQC3 1192 aaKnown RBP13.44□□□□□ -0.26
CDH19-202ENST00000454642 APLP2Q06481 763 aa13.44□□□□□ -0.26
CDH19-202ENST00000454642 SAMD1Q6SPF0 538 aaPredicted RBP13.37□□□□□ -0.27
CDH19-202ENST00000454642 ZNF219Q9P2Y4 722 aaPredicted RBP13.36□□□□□ -0.27
CDH19-202ENST00000454642 AMER1Q5JTC6 1135 aaPredicted RBP13.34□□□□□ -0.27
CDH19-202ENST00000454642 ATF5Q9Y2D1 282 aaPredicted RBP13.33□□□□□ -0.28
CDH19-202ENST00000454642 TRHP20396 242 aaPredicted RBP13.32□□□□□ -0.28
CDH19-202ENST00000454642 ABCB7O75027 752 aa13.22□□□□□ -0.29
CDH19-202ENST00000454642 SLC24A1O60721 1099 aa13.18□□□□□ -0.3
CDH19-202ENST00000454642 POLA2Q14181 598 aa13□□□□□ -0.33
CDH19-202ENST00000454642 RBM42Q9BTD8 480 aaKnown RBP12.89□□□□□ -0.35
CDH19-202ENST00000454642 POTEHQ6S545 545 aa12.88□□□□□ -0.35
CDH19-202ENST00000454642 SPDYE4A6NLX3 237 aa12.77□□□□□ -0.36
CDH19-202ENST00000454642 ZBTB12Q9Y330 459 aaPredicted RBP12.77□□□□□ -0.36
CDH19-202ENST00000454642 MKRN4PQ13434 485 aaPredicted RBP12.74□□□□□ -0.37
CDH19-202ENST00000454642 FBXO3Q9UK99 471 aa12.7□□□□□ -0.38
CDH19-202ENST00000454642 FBLN2P98095 1184 aa12.64□□□□□ -0.39
CDH19-202ENST00000454642 AKT1S1Q96B36 256 aa12.61□□□□□ -0.39
CDH19-202ENST00000454642 CHRDL2Q6WN34 429 aa12.59□□□□□ -0.39
CDH19-202ENST00000454642 OSCARQ8IYS5 282 aa12.59□□□□□ -0.39
CDH19-202ENST00000454642 PROM2Q8N271 834 aa12.56□□□□□ -0.4
CDH19-202ENST00000454642 VASPP50552 380 aaPredicted RBP12.55□□□□□ -0.4
CDH19-202ENST00000454642 REM2Q8IYK8 340 aaPredicted RBP12.48□□□□□ -0.41
CDH19-202ENST00000454642 IFNLR1Q8IU57 520 aaPredicted RBP12.47□□□□□ -0.41
CDH19-202ENST00000454642 DCAF8L2P0C7V8 631 aa12.42□□□□□ -0.42
CDH19-202ENST00000454642 SPDYE2BA6NHP3 402 aa12.38□□□□□ -0.43
CDH19-202ENST00000454642 SPDYE6P0CI01 402 aa12.38□□□□□ -0.43
CDH19-202ENST00000454642 SPDYE2Q495Y8 402 aa12.38□□□□□ -0.43
CDH19-202ENST00000454642 PLCB2Q00722 1185 aa12.35□□□□□ -0.43
CDH19-202ENST00000454642 PITPNM1O00562 1244 aa12.34□□□□□ -0.43
CDH19-202ENST00000454642 PKD2Q13563 968 aa12.29□□□□□ -0.44
CDH19-202ENST00000454642 PIP4P2Q8N4L2 257 aa12.29□□□□□ -0.44
CDH19-202ENST00000454642 FXR2P51116 673 aaKnown RBP eCLIP12.26□□□□□ -0.45
CDH19-202ENST00000454642 SSUH2Q9Y2M2 353 aa12.25□□□□□ -0.45
CDH19-202ENST00000454642 HAP1P54257 671 aaPredicted RBP12.24□□□□□ -0.45
CDH19-202ENST00000454642 KLHL34Q8N239 644 aa12.24□□□□□ -0.45
CDH19-202ENST00000454642 ZNF692Q9BU19 519 aaPredicted RBP12.23□□□□□ -0.45
CDH19-202ENST00000454642 SPOCK2Q92563 424 aa12.16□□□□□ -0.46
CDH19-202ENST00000454642 SPDYE1Q8NFV5 336 aaPredicted RBP12.15□□□□□ -0.46
CDH19-202ENST00000454642 PLCD3Q8N3E9 789 aa12.13□□□□□ -0.47
CDH19-202ENST00000454642 ECM2O94769 699 aaPredicted RBP12.11□□□□□ -0.47
CDH19-202ENST00000454642 PABPN1Q86U42 306 aaKnown RBP eCLIP12.1□□□□□ -0.47
CDH19-202ENST00000454642 STAG3Q9UJ98 1225 aa12.1□□□□□ -0.47
CDH19-202ENST00000454642 SP7Q8TDD2 431 aaPredicted RBP12.1□□□□□ -0.47
CDH19-202ENST00000454642 MIER1Q8N108 512 aa12.07□□□□□ -0.48
CDH19-202ENST00000454642 CLEC11AQ9Y240 323 aa12.06□□□□□ -0.48
CDH19-202ENST00000454642 HAX1O00165 279 aa12.02□□□□□ -0.49
CDH19-202ENST00000454642 NPM1P06748 294 aaKnown RBP eCLIP12.01□□□□□ -0.49
CDH19-202ENST00000454642 PRKAR2AP13861 404 aaKnown RBP12□□□□□ -0.49
CDH19-202ENST00000454642 ZBTB4Q9P1Z0 1013 aaPredicted RBP12□□□□□ -0.49
CDH19-202ENST00000454642 RGL2O15211 777 aa11.99□□□□□ -0.49
CDH19-202ENST00000454642 BBXQ8WY36 941 aaPredicted RBP11.97□□□□□ -0.49
CDH19-202ENST00000454642 PAXIP1Q6ZW49 1069 aaPredicted RBP11.97□□□□□ -0.49
CDH19-202ENST00000454642 CFAP44Q96MT7 982 aa11.96□□□□□ -0.5
CDH19-202ENST00000454642 VSIG10Q8N0Z9 540 aa11.95□□□□□ -0.5
CDH19-202ENST00000454642 CIZ1Q9ULV3 898 aaPredicted RBP11.94□□□□□ -0.5
CDH19-202ENST00000454642 BCANQ96GW7 911 aa11.93□□□□□ -0.5
CDH19-202ENST00000454642 EVX2Q03828 476 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms