RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 DDX21Q9NR30 783 aaKnown RBP eCLIP13.22□□□□□ -0.29
DDR1-239ENST00000452441 RGPD1P0DJD0 1748 aa13.22□□□□□ -0.29
DDR1-239ENST00000452441 SSH2Q76I76 1423 aa13.22□□□□□ -0.29
DDR1-239ENST00000452441 ZSCAN22P10073 491 aaPredicted RBP13.22□□□□□ -0.29
DDR1-239ENST00000452441 TFCP2Q12800 502 aa13.22□□□□□ -0.29
DDR1-239ENST00000452441 TTC39AQ5SRH9 613 aa13.22□□□□□ -0.29
DDR1-239ENST00000452441 TMEM94Q12767 1356 aa13.22□□□□□ -0.29
DDR1-239ENST00000452441 USP31Q70CQ4 1352 aa13.22□□□□□ -0.29
DDR1-239ENST00000452441 RGPD8O14715 1765 aaPredicted RBP13.22□□□□□ -0.29
DDR1-239ENST00000452441 TOPAZ1Q8N9V7 1692 aa13.21□□□□□ -0.29
DDR1-239ENST00000452441 RXRAP19793 462 aa13.21□□□□□ -0.29
DDR1-239ENST00000452441 PSMA5P28066 241 aa13.21□□□□□ -0.29
DDR1-239ENST00000452441 BEND3Q5T5X7 828 aa13.21□□□□□ -0.29
DDR1-239ENST00000452441 PDLIM2Q96JY6 352 aa13.21□□□□□ -0.29
DDR1-239ENST00000452441 NCOA5Q9HCD5 579 aaKnown RBP13.21□□□□□ -0.29
DDR1-239ENST00000452441 SGSM2O43147 1006 aa13.21□□□□□ -0.3
DDR1-239ENST00000452441 JAK2O60674 1132 aa13.21□□□□□ -0.3
DDR1-239ENST00000452441 CSPP1Q1MSJ5 1256 aa13.21□□□□□ -0.3
DDR1-239ENST00000452441 OTUD7BQ6GQQ9 843 aa13.21□□□□□ -0.3
DDR1-239ENST00000452441 FAM89AQ96GI7 184 aa13.21□□□□□ -0.3
DDR1-239ENST00000452441 BTG4Q9NY30 223 aa13.21□□□□□ -0.3
DDR1-239ENST00000452441 HS1BP3Q53T59 392 aa13.2□□□□□ -0.3
DDR1-239ENST00000452441 MEX3CQ5U5Q3 659 aaKnown RBP13.2□□□□□ -0.3
DDR1-239ENST00000452441 NFXL1Q6ZNB6 911 aa13.2□□□□□ -0.3
DDR1-239ENST00000452441 DBNDD2Q9BQY9 259 aa13.2□□□□□ -0.3
DDR1-239ENST00000452441 PDCL3Q9H2J4 239 aa13.2□□□□□ -0.3
DDR1-239ENST00000452441 SLC52A2Q9HAB3 445 aa13.2□□□□□ -0.3
DDR1-239ENST00000452441 DACT1Q9NYF0 836 aa13.2□□□□□ -0.3
DDR1-239ENST00000452441 ABCF2Q9UG63 623 aa13.2□□□□□ -0.3
DDR1-239ENST00000452441 FAM182BQ5T319 152 aa13.2□□□□□ -0.3
DDR1-239ENST00000452441 CREB3L3Q68CJ9 461 aa13.2□□□□□ -0.3
DDR1-239ENST00000452441 RUFY3Q7L099 469 aa13.2□□□□□ -0.3
DDR1-239ENST00000452441 NUP62CLQ9H1M0 184 aa13.2□□□□□ -0.3
DDR1-239ENST00000452441 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.2□□□□□ -0.3
DDR1-239ENST00000452441 KIF13AQ9H1H9 1805 aa13.19□□□□□ -0.3
DDR1-239ENST00000452441 A0A0D9SFI3 127 aa13.19□□□□□ -0.3
DDR1-239ENST00000452441 IFIT1P09914 478 aaKnown RBP13.19□□□□□ -0.3
DDR1-239ENST00000452441 LUZP1Q86V48 1076 aa13.19□□□□□ -0.3
DDR1-239ENST00000452441 FAM177A1Q8N128 213 aaPredicted RBP13.19□□□□□ -0.3
DDR1-239ENST00000452441 IGSF3O75054 1194 aa13.19□□□□□ -0.3
DDR1-239ENST00000452441 NALCNQ8IZF0 1738 aa13.19□□□□□ -0.3
DDR1-239ENST00000452441 METTL24Q5JXM2 366 aa13.19□□□□□ -0.3
DDR1-239ENST00000452441 TTLL7Q6ZT98 887 aa13.19□□□□□ -0.3
DDR1-239ENST00000452441 TRMT1Q9NXH9 659 aaKnown RBP13.19□□□□□ -0.3
DDR1-239ENST00000452441 TRMT112Q9UI30 125 aaKnown RBP13.19□□□□□ -0.3
DDR1-239ENST00000452441 F13A1P00488 732 aa13.18□□□□□ -0.3
DDR1-239ENST00000452441 ME3Q16798 604 aa13.18□□□□□ -0.3
DDR1-239ENST00000452441 EVI5LQ96CN4 794 aa13.18□□□□□ -0.3
DDR1-239ENST00000452441 PKNOX2Q96KN3 472 aa13.18□□□□□ -0.3
DDR1-239ENST00000452441 C16orf45Q96MC5 204 aaPredicted RBP13.18□□□□□ -0.3
DDR1-239ENST00000452441 CUL4AQ13619 759 aa13.18□□□□□ -0.3
DDR1-239ENST00000452441 CCDC158Q5M9N0 1113 aa13.18□□□□□ -0.3
DDR1-239ENST00000452441 CDC37L1Q7L3B6 337 aa13.18□□□□□ -0.3
DDR1-239ENST00000452441 RALYLQ86SE5 291 aaKnown RBP13.18□□□□□ -0.3
DDR1-239ENST00000452441 ZNF500O60304 480 aaPredicted RBP13.18□□□□□ -0.3
DDR1-239ENST00000452441 ALDH1L1O75891 902 aa13.18□□□□□ -0.3
DDR1-239ENST00000452441 CCDC192P0DO97 292 aa13.18□□□□□ -0.3
DDR1-239ENST00000452441 ANAPC15P60006 121 aa13.18□□□□□ -0.3
DDR1-239ENST00000452441 CCDC183Q5T5S1 534 aa13.18□□□□□ -0.3
DDR1-239ENST00000452441 Q6ZUG5 572 aa13.18□□□□□ -0.3
DDR1-239ENST00000452441 DCAF5Q96JK2 942 aa13.18□□□□□ -0.3
DDR1-239ENST00000452441 CWC25Q9NXE8 425 aaPredicted RBP13.18□□□□□ -0.3
DDR1-239ENST00000452441 WWC3Q9ULE0 1092 aa13.18□□□□□ -0.3
DDR1-239ENST00000452441 JAG2Q9Y219 1238 aa13.18□□□□□ -0.3
DDR1-239ENST00000452441 PHKG2P15735 406 aa13.17□□□□□ -0.3
DDR1-239ENST00000452441 APOBRQ0VD83 1088 aa13.17□□□□□ -0.3
DDR1-239ENST00000452441 SAMD1Q6SPF0 538 aaPredicted RBP13.17□□□□□ -0.3
DDR1-239ENST00000452441 SSH3Q8TE77 659 aa13.17□□□□□ -0.3
DDR1-239ENST00000452441 INTS4Q96HW7 963 aaKnown RBP13.17□□□□□ -0.3
DDR1-239ENST00000452441 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.17□□□□□ -0.31e-7■■■□□ 14.9
DDR1-239ENST00000452441 CCDC73Q6ZRK6 1079 aa13.17□□□□□ -0.3
DDR1-239ENST00000452441 CCAR2Q8N163 923 aaKnown RBP13.17□□□□□ -0.3
DDR1-239ENST00000452441 GOLGA6L6A8MZA4 724 aa13.17□□□□□ -0.3
DDR1-239ENST00000452441 MPHOSPH8Q99549 860 aa13.17□□□□□ -0.3
DDR1-239ENST00000452441 TMX1Q9H3N1 280 aa13.16□□□□□ -0.3
DDR1-239ENST00000452441 ERBB3P21860 1342 aa13.16□□□□□ -0.3
DDR1-239ENST00000452441 SPDYE4A6NLX3 237 aa13.16□□□□□ -0.3
DDR1-239ENST00000452441 STARD3NLO95772 234 aa13.16□□□□□ -0.3
DDR1-239ENST00000452441 HSPA4P34932 840 aa13.16□□□□□ -0.3
DDR1-239ENST00000452441 ZNF589Q86UQ0 364 aaPredicted RBP13.16□□□□□ -0.3
DDR1-239ENST00000452441 NGLY1Q96IV0 654 aa13.16□□□□□ -0.3
DDR1-239ENST00000452441 TAF6LQ9Y6J9 622 aa13.16□□□□□ -0.3
DDR1-239ENST00000452441 KDRP35968 1356 aa13.16□□□□□ -0.3
DDR1-239ENST00000452441 HIP1O00291 1037 aa13.16□□□□□ -0.3
DDR1-239ENST00000452441 IL2RBP14784 551 aa13.16□□□□□ -0.3
DDR1-239ENST00000452441 TRDNQ13061 729 aa13.16□□□□□ -0.3
DDR1-239ENST00000452441 MAP3K11Q16584 847 aa13.16□□□□□ -0.3
DDR1-239ENST00000452441 LDHAL6AQ6ZMR3 332 aa13.16□□□□□ -0.3
DDR1-239ENST00000452441 FTOQ9C0B1 505 aaKnown RBP eCLIP13.16□□□□□ -0.3
DDR1-239ENST00000452441 DNAJC25Q9H1X3 360 aa13.16□□□□□ -0.3
DDR1-239ENST00000452441 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.16□□□□□ -0.3
DDR1-239ENST00000452441 TPCN1Q9ULQ1 816 aa13.16□□□□□ -0.3
DDR1-239ENST00000452441 V9GYY5 206 aaPredicted RBP13.16□□□□□ -0.3
DDR1-239ENST00000452441 PIK3C2AO00443 1686 aa13.16□□□□□ -0.3
DDR1-239ENST00000452441 EXOC5O00471 708 aa13.15□□□□□ -0.3
DDR1-239ENST00000452441 GCKRQ14397 625 aa13.15□□□□□ -0.3
DDR1-239ENST00000452441 NEK1Q96PY6 1258 aa13.15□□□□□ -0.3
DDR1-239ENST00000452441 SLAIN2Q9P270 581 aa13.15□□□□□ -0.3
DDR1-239ENST00000452441 NPHP4O75161 1426 aaPredicted RBP13.15□□□□□ -0.3
DDR1-239ENST00000452441 SMC2O95347 1197 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms