RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 ZSCAN30Q86W11 494 aa15.9■□□□□ 0.14
MCF2L-213ENST00000421756 ZCRB1Q8TBF4 217 aaKnown RBP15.9■□□□□ 0.14
MCF2L-213ENST00000421756 SYAP1Q96A49 352 aaPredicted RBP15.9■□□□□ 0.14
MCF2L-213ENST00000421756 INTS4Q96HW7 963 aaKnown RBP15.9■□□□□ 0.14
MCF2L-213ENST00000421756 HELBQ8NG08 1087 aaPredicted RBP15.9■□□□□ 0.14
MCF2L-213ENST00000421756 DCAF5Q96JK2 942 aa15.9■□□□□ 0.14
MCF2L-213ENST00000421756 FTOQ9C0B1 505 aaKnown RBP eCLIP15.9■□□□□ 0.14
MCF2L-213ENST00000421756 GPHNQ9NQX3 736 aaPredicted RBP15.9■□□□□ 0.14
MCF2L-213ENST00000421756 NECTIN1Q15223 517 aa15.9■□□□□ 0.14
MCF2L-213ENST00000421756 Q6ZUG5 572 aa15.9■□□□□ 0.14
MCF2L-213ENST00000421756 HDAC5Q9UQL6 1122 aa15.9■□□□□ 0.14
MCF2L-213ENST00000421756 FMN2Q9NZ56 1722 aa15.9■□□□□ 0.14
MCF2L-213ENST00000421756 SNAP23O00161 211 aa15.89■□□□□ 0.13
MCF2L-213ENST00000421756 ST3GAL1Q11201 340 aa15.89■□□□□ 0.13
MCF2L-213ENST00000421756 RNF20Q5VTR2 975 aa15.89■□□□□ 0.13
MCF2L-213ENST00000421756 BICD2Q8TD16 824 aa15.89■□□□□ 0.13
MCF2L-213ENST00000421756 FAM184AQ8NB25 1140 aa15.89■□□□□ 0.13
MCF2L-213ENST00000421756 RPAP1Q9BWH6 1393 aaPredicted RBP15.89■□□□□ 0.13
MCF2L-213ENST00000421756 OTUD7BQ6GQQ9 843 aa15.88■□□□□ 0.13
MCF2L-213ENST00000421756 ASAP1Q9ULH1 1129 aa15.88■□□□□ 0.13
MCF2L-213ENST00000421756 MTMR6Q9Y217 621 aa15.88■□□□□ 0.13
MCF2L-213ENST00000421756 TCHHQ07283 1943 aa15.88■□□□□ 0.13
MCF2L-213ENST00000421756 APOBRQ0VD83 1088 aa15.88■□□□□ 0.13
MCF2L-213ENST00000421756 CLEC17AQ6ZS10 378 aa15.88■□□□□ 0.13
MCF2L-213ENST00000421756 MEGF6O75095 1541 aa15.88■□□□□ 0.13
MCF2L-213ENST00000421756 CHMP4CQ96CF2 233 aa15.87■□□□□ 0.13
MCF2L-213ENST00000421756 APPP05067 770 aa15.87■□□□□ 0.13
MCF2L-213ENST00000421756 AOX1Q06278 1338 aa15.87■□□□□ 0.13
MCF2L-213ENST00000421756 LTN1O94822 1766 aa15.87■□□□□ 0.13
MCF2L-213ENST00000421756 IFIT1P09914 478 aaKnown RBP15.87■□□□□ 0.13
MCF2L-213ENST00000421756 ADORA1P30542 326 aa15.87■□□□□ 0.13
MCF2L-213ENST00000421756 TSC1Q92574 1164 aa15.87■□□□□ 0.13
MCF2L-213ENST00000421756 MAP4K1Q92918 833 aa15.87■□□□□ 0.13
MCF2L-213ENST00000421756 ZSWIM6Q9HCJ5 1215 aa15.87■□□□□ 0.13
MCF2L-213ENST00000421756 FAM13BQ9NYF5 915 aa15.87■□□□□ 0.13
MCF2L-213ENST00000421756 TBC1D2BQ9UPU7 963 aa15.87■□□□□ 0.13
MCF2L-213ENST00000421756 C1orf167Q5SNV9 1468 aa15.86■□□□□ 0.13
MCF2L-213ENST00000421756 NALCNQ8IZF0 1738 aa15.86■□□□□ 0.13
MCF2L-213ENST00000421756 LIG1P18858 919 aa15.86■□□□□ 0.13
MCF2L-213ENST00000421756 MTX1Q13505 466 aa15.86■□□□□ 0.13
MCF2L-213ENST00000421756 DNAJC10Q8IXB1 793 aa15.86■□□□□ 0.13
MCF2L-213ENST00000421756 ISY1Q9ULR0 285 aaKnown RBP15.86■□□□□ 0.13
MCF2L-213ENST00000421756 KDM6AO15550 1401 aaPredicted RBP15.86■□□□□ 0.13
MCF2L-213ENST00000421756 TAF5LO75529 589 aa15.86■□□□□ 0.13
MCF2L-213ENST00000421756 CYP21A2P08686 494 aa15.86■□□□□ 0.13
MCF2L-213ENST00000421756 PSMA5P28066 241 aa15.86■□□□□ 0.13
MCF2L-213ENST00000421756 CADPS2Q86UW7 1296 aa15.86■□□□□ 0.13
MCF2L-213ENST00000421756 NEK1Q96PY6 1258 aa15.86■□□□□ 0.13
MCF2L-213ENST00000421756 RXRAP19793 462 aa15.86■□□□□ 0.13
MCF2L-213ENST00000421756 DRC7Q8IY82 874 aa15.86■□□□□ 0.13
MCF2L-213ENST00000421756 CWC25Q9NXE8 425 aaPredicted RBP15.86■□□□□ 0.13
MCF2L-213ENST00000421756 TTC6Q86TZ1 520 aa15.85■□□□□ 0.13
MCF2L-213ENST00000421756 GJB4Q9NTQ9 266 aa15.85■□□□□ 0.13
MCF2L-213ENST00000421756 ADCY5O95622 1261 aa15.85■□□□□ 0.13
MCF2L-213ENST00000421756 CCDC57Q2TAC2 916 aa15.85■□□□□ 0.13
MCF2L-213ENST00000421756 CCDC144CPQ8IYA2 1237 aa15.85■□□□□ 0.13
MCF2L-213ENST00000421756 A0A1B0GUL7 405 aa15.84■□□□□ 0.13
MCF2L-213ENST00000421756 SPATA32Q96LK8 384 aa15.84■□□□□ 0.13
MCF2L-213ENST00000421756 DACT1Q9NYF0 836 aa15.84■□□□□ 0.13
MCF2L-213ENST00000421756 IQSEC3Q9UPP2 1182 aaPredicted RBP15.84■□□□□ 0.13
MCF2L-213ENST00000421756 RPS6KB1P23443 525 aa15.84■□□□□ 0.13
MCF2L-213ENST00000421756 TOB2Q14106 344 aaPredicted RBP15.84■□□□□ 0.13
MCF2L-213ENST00000421756 PAG1Q9NWQ8 432 aa15.84■□□□□ 0.13
MCF2L-213ENST00000421756 NFAT5O94916 1531 aa15.83■□□□□ 0.13
MCF2L-213ENST00000421756 CEP126Q9P2H0 1117 aa15.83■□□□□ 0.12
MCF2L-213ENST00000421756 ATP6V1DQ9Y5K8 247 aa15.83■□□□□ 0.12
MCF2L-213ENST00000421756 ADAMTS2O95450 1211 aa15.83■□□□□ 0.12
MCF2L-213ENST00000421756 CCDC183Q5T5S1 534 aa15.83■□□□□ 0.12
MCF2L-213ENST00000421756 PLBD2Q8NHP8 589 aa15.83■□□□□ 0.12
MCF2L-213ENST00000421756 ACSBG1Q96GR2 724 aa15.83■□□□□ 0.12
MCF2L-213ENST00000421756 TMOD3Q9NYL9 352 aa15.83■□□□□ 0.12
MCF2L-213ENST00000421756 UBE2HP62256 183 aa15.82■□□□□ 0.12
MCF2L-213ENST00000421756 BRINP3Q76B58 766 aa15.82■□□□□ 0.12
MCF2L-213ENST00000421756 PPP1R9BQ96SB3 815 aa15.82■□□□□ 0.12
MCF2L-213ENST00000421756 ZNF335Q9H4Z2 1342 aaPredicted RBP15.82■□□□□ 0.12
MCF2L-213ENST00000421756 TOMM22Q9NS69 142 aa15.82■□□□□ 0.12
MCF2L-213ENST00000421756 KCNQ4P56696 695 aa15.82■□□□□ 0.12
MCF2L-213ENST00000421756 KRT85P78386 507 aa15.82■□□□□ 0.12
MCF2L-213ENST00000421756 TTC39AQ5SRH9 613 aa15.82■□□□□ 0.12
MCF2L-213ENST00000421756 SMIM5Q71RC9 77 aa15.82■□□□□ 0.12
MCF2L-213ENST00000421756 LUZP1Q86V48 1076 aa15.82■□□□□ 0.12
MCF2L-213ENST00000421756 IDH1O75874 414 aaKnown RBP15.82■□□□□ 0.12
MCF2L-213ENST00000421756 MCMDC2Q4G0Z9 681 aa15.82■□□□□ 0.12
MCF2L-213ENST00000421756 CCDC82Q8N4S0 544 aa15.82■□□□□ 0.12
MCF2L-213ENST00000421756 RFX5P48382 616 aaPredicted RBP15.81■□□□□ 0.12
MCF2L-213ENST00000421756 STOX1Q6ZVD7 989 aa15.81■□□□□ 0.12
MCF2L-213ENST00000421756 COL15A1P39059 1388 aa15.81■□□□□ 0.12
MCF2L-213ENST00000421756 HIP1O00291 1037 aa15.81■□□□□ 0.12
MCF2L-213ENST00000421756 PHF14O94880 888 aa15.81■□□□□ 0.12
MCF2L-213ENST00000421756 POLR3DP05423 398 aaPredicted RBP15.81■□□□□ 0.12
MCF2L-213ENST00000421756 SCARF1Q14162 830 aa15.81■□□□□ 0.12
MCF2L-213ENST00000421756 BTG4Q9NY30 223 aa15.81■□□□□ 0.12
MCF2L-213ENST00000421756 ZSCAN31Q96LW9 406 aaPredicted RBP15.81■□□□□ 0.12
MCF2L-213ENST00000421756 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.81■□□□□ 0.12
MCF2L-213ENST00000421756 XRN1Q8IZH2 1706 aaKnown RBP15.81■□□□□ 0.12
MCF2L-213ENST00000421756 FAM208AQ9UK61 1670 aaKnown RBP15.81■□□□□ 0.12
MCF2L-213ENST00000421756 COPRSQ9NQ92 184 aa15.8■□□□□ 0.12
MCF2L-213ENST00000421756 CNNM1Q9NRU3 951 aa15.8■□□□□ 0.12
MCF2L-213ENST00000421756 DENND2AQ9ULE3 1009 aa15.8■□□□□ 0.12
MCF2L-213ENST00000421756 INCENPQ9NQS7 918 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 180.3 ms