RNA–Protein interactions for RNA: ENST00000419905.5

LINC01393-201, Transcript of long intergenic non-protein coding RNA 1393, humanhuman

TSL 2 BASIC

Gene LINC01393, Length 746 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01393-201ENST00000419905 ANP32CO43423 234 aa8.62□□□□□ -1.03
LINC01393-201ENST00000419905 WDR4P57081 412 aaKnown RBP8.62□□□□□ -1.03
LINC01393-201ENST00000419905 PLA2G4EQ3MJ16 856 aa8.62□□□□□ -1.03
LINC01393-201ENST00000419905 KRT27Q7Z3Y8 459 aa8.62□□□□□ -1.03
LINC01393-201ENST00000419905 SEPT12Q8IYM1 358 aa8.62□□□□□ -1.03
LINC01393-201ENST00000419905 PNNQ9H307 717 aaKnown RBP8.62□□□□□ -1.03
LINC01393-201ENST00000419905 EMILIN1Q9Y6C2 1016 aa8.62□□□□□ -1.03
LINC01393-201ENST00000419905 OVOS2A0A0G2JMS6 1433 aa8.62□□□□□ -1.03
LINC01393-201ENST00000419905 TNS2Q63HR2 1409 aa8.62□□□□□ -1.03
LINC01393-201ENST00000419905 MYBBP1AQ9BQG0 1328 aaKnown RBP8.61□□□□□ -1.03
LINC01393-201ENST00000419905 EXOC5O00471 708 aa8.61□□□□□ -1.03
LINC01393-201ENST00000419905 DIAPH1O60610 1272 aaKnown RBP8.61□□□□□ -1.03
LINC01393-201ENST00000419905 SLURP2P0DP57 97 aa8.61□□□□□ -1.03
LINC01393-201ENST00000419905 SH3BP2P78314 561 aa8.61□□□□□ -1.03
LINC01393-201ENST00000419905 TPRNQ4KMQ1 711 aa8.61□□□□□ -1.03
LINC01393-201ENST00000419905 WHAMMQ8TF30 809 aa8.61□□□□□ -1.03
LINC01393-201ENST00000419905 KRTAP9-9Q9BYP9 154 aa8.61□□□□□ -1.03
LINC01393-201ENST00000419905 KRTAP9-4Q9BYQ2 154 aa8.61□□□□□ -1.03
LINC01393-201ENST00000419905 POLKQ9UBT6 870 aa8.61□□□□□ -1.03
LINC01393-201ENST00000419905 RGS17Q9UGC6 210 aaPredicted RBP8.61□□□□□ -1.03
LINC01393-201ENST00000419905 PARD3Q8TEW0 1356 aa8.61□□□□□ -1.03
LINC01393-201ENST00000419905 PCDH11XQ9BZA7 1347 aa8.6□□□□□ -1.03
LINC01393-201ENST00000419905 PCDH11YQ9BZA8 1340 aa8.6□□□□□ -1.03
LINC01393-201ENST00000419905 CD46P15529 392 aa8.6□□□□□ -1.03
LINC01393-201ENST00000419905 CNGB1Q14028 1251 aaPredicted RBP8.6□□□□□ -1.03
LINC01393-201ENST00000419905 PTCRAQ6ISU1 281 aaPredicted RBP8.6□□□□□ -1.03
LINC01393-201ENST00000419905 FAM196AQ6ZSG2 479 aa8.6□□□□□ -1.03
LINC01393-201ENST00000419905 CCDC125Q86Z20 511 aa8.6□□□□□ -1.03
LINC01393-201ENST00000419905 MPNDQ8N594 471 aa8.6□□□□□ -1.03
LINC01393-201ENST00000419905 CCDC102AQ96A19 550 aa8.6□□□□□ -1.03
LINC01393-201ENST00000419905 SPG7Q9UQ90 795 aa8.6□□□□□ -1.03
LINC01393-201ENST00000419905 TLL2Q9Y6L7 1015 aa8.6□□□□□ -1.03
LINC01393-201ENST00000419905 LTN1O94822 1766 aa8.6□□□□□ -1.03
LINC01393-201ENST00000419905 ZMYND10O75800 440 aa8.59□□□□□ -1.03
LINC01393-201ENST00000419905 HSP90AB1P08238 724 aaKnown RBP8.59□□□□□ -1.03
LINC01393-201ENST00000419905 CLCN1P35523 988 aa8.59□□□□□ -1.03
LINC01393-201ENST00000419905 MTHFSP49914 203 aa8.59□□□□□ -1.03
LINC01393-201ENST00000419905 AMOTQ4VCS5 1084 aa8.59□□□□□ -1.03
LINC01393-201ENST00000419905 HSP90AB2PQ58FF8 381 aa8.59□□□□□ -1.03
LINC01393-201ENST00000419905 KLF16Q9BXK1 252 aaPredicted RBP8.59□□□□□ -1.03
LINC01393-201ENST00000419905 GLI3P10071 1580 aa8.59□□□□□ -1.03
LINC01393-201ENST00000419905 JUNDP17535 347 aa8.58□□□□□ -1.04
LINC01393-201ENST00000419905 WDR43Q15061 677 aaKnown RBP eCLIP8.58□□□□□ -1.04
LINC01393-201ENST00000419905 GPCPD1Q9NPB8 672 aa8.58□□□□□ -1.04
LINC01393-201ENST00000419905 IGSF1Q8N6C5 1336 aa8.57□□□□□ -1.04
LINC01393-201ENST00000419905 DISP2A7MBM2 1401 aa8.57□□□□□ -1.04
LINC01393-201ENST00000419905 THSD7AQ9UPZ6 1657 aa8.57□□□□□ -1.04
LINC01393-201ENST00000419905 K7ELQ4 463 aaPredicted RBP8.57□□□□□ -1.04
LINC01393-201ENST00000419905 U2SURPO15042 1029 aaKnown RBP8.57□□□□□ -1.04
LINC01393-201ENST00000419905 PPP2R1AP30153 589 aa8.57□□□□□ -1.04
LINC01393-201ENST00000419905 USP46P62068 366 aa8.57□□□□□ -1.04
LINC01393-201ENST00000419905 EIF4A2Q14240 407 aaKnown RBP8.57□□□□□ -1.04
LINC01393-201ENST00000419905 PLEKHO1Q53GL0 409 aaPredicted RBP8.57□□□□□ -1.04
LINC01393-201ENST00000419905 C1orf141Q5JVX7 400 aa8.57□□□□□ -1.04
LINC01393-201ENST00000419905 RNFT1Q5M7Z0 435 aa8.57□□□□□ -1.04
LINC01393-201ENST00000419905 C6orf118Q5T5N4 469 aa8.57□□□□□ -1.04
LINC01393-201ENST00000419905 NLRP7Q8WX94 980 aa8.57□□□□□ -1.04
LINC01393-201ENST00000419905 KRTAP4-12Q9BQ66 201 aa8.57□□□□□ -1.04
LINC01393-201ENST00000419905 MAPK8IP3Q9UPT6 1336 aa8.56□□□□□ -1.04
LINC01393-201ENST00000419905 COL18A1P39060 1754 aa8.56□□□□□ -1.04
LINC01393-201ENST00000419905 KRTAP4-8A0A0G2JLE6 195 aa8.56□□□□□ -1.04
LINC01393-201ENST00000419905 SOCS7O14512 581 aa8.56□□□□□ -1.04
LINC01393-201ENST00000419905 BAG6P46379 1132 aa8.56□□□□□ -1.04
LINC01393-201ENST00000419905 GAS2L2Q8NHY3 880 aa8.56□□□□□ -1.04
LINC01393-201ENST00000419905 ZCRB1Q8TBF4 217 aaKnown RBP8.56□□□□□ -1.04
LINC01393-201ENST00000419905 NANOS1Q8WY41 292 aaKnown RBP8.56□□□□□ -1.04
LINC01393-201ENST00000419905 NUDT12Q9BQG2 462 aa8.56□□□□□ -1.04
LINC01393-201ENST00000419905 BCL9O00512 1426 aa8.55□□□□□ -1.04
LINC01393-201ENST00000419905 PARP4Q9UKK3 1724 aaKnown RBP8.55□□□□□ -1.04
LINC01393-201ENST00000419905 MDM2Q00987 491 aaPredicted RBP8.55□□□□□ -1.04
LINC01393-201ENST00000419905 GALNT6Q8NCL4 622 aa8.55□□□□□ -1.04
LINC01393-201ENST00000419905 ZC3H15Q8WU90 426 aaKnown RBP8.55□□□□□ -1.04
LINC01393-201ENST00000419905 NCAPD2Q15021 1401 aa8.54□□□□□ -1.04
LINC01393-201ENST00000419905 KDRP35968 1356 aa8.54□□□□□ -1.04
LINC01393-201ENST00000419905 KDM4AO75164 1064 aa8.54□□□□□ -1.04
LINC01393-201ENST00000419905 PROCP04070 461 aa8.54□□□□□ -1.04
LINC01393-201ENST00000419905 U2AF1L5P0DN76 240 aaPredicted RBP8.54□□□□□ -1.04
LINC01393-201ENST00000419905 U2AF1Q01081 240 aaKnown RBP eCLIP8.54□□□□□ -1.04
LINC01393-201ENST00000419905 NBPF6Q5VWK0 638 aa8.54□□□□□ -1.04
LINC01393-201ENST00000419905 SULT6B1Q6IMI4 303 aa8.54□□□□□ -1.04
LINC01393-201ENST00000419905 DCAF5Q96JK2 942 aa8.54□□□□□ -1.04
LINC01393-201ENST00000419905 NBPF4Q96M43 638 aa8.54□□□□□ -1.04
LINC01393-201ENST00000419905 PRKRIP1Q9H875 184 aaPredicted RBP8.54□□□□□ -1.04
LINC01393-201ENST00000419905 FAM217BQ9NTX9 383 aaPredicted RBP8.54□□□□□ -1.04
LINC01393-201ENST00000419905 LRRC37A3O60309 1634 aa8.54□□□□□ -1.04
LINC01393-201ENST00000419905 ITGB2P05107 769 aa8.53□□□□□ -1.04
LINC01393-201ENST00000419905 FBLN1P23142 703 aa8.53□□□□□ -1.04
LINC01393-201ENST00000419905 VARSP26640 1264 aaKnown RBP8.53□□□□□ -1.04
LINC01393-201ENST00000419905 IL13P35225 146 aa8.53□□□□□ -1.04
LINC01393-201ENST00000419905 LMOD3Q0VAK6 560 aa8.53□□□□□ -1.04
LINC01393-201ENST00000419905 AMHR2Q16671 573 aa8.53□□□□□ -1.04
LINC01393-201ENST00000419905 IFNL2Q8IZJ0 200 aa8.53□□□□□ -1.04
LINC01393-201ENST00000419905 USHBP1Q8N6Y0 703 aa8.53□□□□□ -1.04
LINC01393-201ENST00000419905 KRI1Q8N9T8 703 aaKnown RBP8.53□□□□□ -1.04
LINC01393-201ENST00000419905 DNMT3LQ9UJW3 386 aa8.53□□□□□ -1.04
LINC01393-201ENST00000419905 PEAK1Q9H792 1746 aa8.53□□□□□ -1.04
LINC01393-201ENST00000419905 MEGF6O75095 1541 aa8.53□□□□□ -1.04
LINC01393-201ENST00000419905 UPP2O95045 317 aa8.52□□□□□ -1.05
LINC01393-201ENST00000419905 BMP2P12643 396 aa8.52□□□□□ -1.05
LINC01393-201ENST00000419905 ZNF530Q6P9A1 599 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms