RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 FTOQ9C0B1 505 aaKnown RBP eCLIP14.13□□□□□ -0.15
LIMK1-202ENST00000418310 USP42Q9H9J4 1324 aaKnown RBP14.13□□□□□ -0.15
LIMK1-202ENST00000418310 A0A0G2JLW4 131 aa14.13□□□□□ -0.15
LIMK1-202ENST00000418310 CCT2P78371 535 aaKnown RBP14.13□□□□□ -0.15
LIMK1-202ENST00000418310 TOB2Q14106 344 aaPredicted RBP14.13□□□□□ -0.15
LIMK1-202ENST00000418310 TMEM87AQ8NBN3 555 aa14.13□□□□□ -0.15
LIMK1-202ENST00000418310 BRF1Q92994 677 aa14.13□□□□□ -0.15
LIMK1-202ENST00000418310 NUP62CLQ9H1M0 184 aa14.13□□□□□ -0.15
LIMK1-202ENST00000418310 H3BQV1 296 aa14.13□□□□□ -0.15
LIMK1-202ENST00000418310 RPS6KB1P23443 525 aa14.13□□□□□ -0.15
LIMK1-202ENST00000418310 NOLC1Q14978 699 aaKnown RBP eCLIP14.13□□□□□ -0.15
LIMK1-202ENST00000418310 IFFO2Q5TF58 517 aa14.13□□□□□ -0.15
LIMK1-202ENST00000418310 RAB11FIP4Q86YS3 637 aa14.13□□□□□ -0.15
LIMK1-202ENST00000418310 FAM184AQ8NB25 1140 aa14.13□□□□□ -0.15
LIMK1-202ENST00000418310 Q6ZUG5 572 aa14.12□□□□□ -0.15
LIMK1-202ENST00000418310 TIMM10P62072 90 aa14.12□□□□□ -0.15
LIMK1-202ENST00000418310 LMBR1LQ6UX01 489 aa14.12□□□□□ -0.15
LIMK1-202ENST00000418310 TNMDQ9H2S6 317 aa14.12□□□□□ -0.15
LIMK1-202ENST00000418310 PYCARDQ9ULZ3 195 aa14.12□□□□□ -0.15
LIMK1-202ENST00000418310 MARF1Q9Y4F3 1742 aaKnown RBP14.11□□□□□ -0.15
LIMK1-202ENST00000418310 GOLIM4O00461 696 aa14.11□□□□□ -0.15
LIMK1-202ENST00000418310 TATP17735 454 aaPredicted RBP14.11□□□□□ -0.15
LIMK1-202ENST00000418310 HSP90AB3PQ58FF7 597 aa14.11□□□□□ -0.15
LIMK1-202ENST00000418310 ERCC4Q92889 916 aaPredicted RBP14.11□□□□□ -0.15
LIMK1-202ENST00000418310 IL17RAQ96F46 866 aa14.11□□□□□ -0.15
LIMK1-202ENST00000418310 SLC52A2Q9HAB3 445 aa14.11□□□□□ -0.15
LIMK1-202ENST00000418310 CCDC192P0DO97 292 aa14.11□□□□□ -0.15
LIMK1-202ENST00000418310 TNNI3KQ59H18 835 aa14.11□□□□□ -0.15
LIMK1-202ENST00000418310 SASS6Q6UVJ0 657 aa14.11□□□□□ -0.15
LIMK1-202ENST00000418310 ZNF594Q96JF6 807 aaPredicted RBP14.11□□□□□ -0.15
LIMK1-202ENST00000418310 PKNOX2Q96KN3 472 aa14.11□□□□□ -0.15
LIMK1-202ENST00000418310 HDAC5Q9UQL6 1122 aa14.11□□□□□ -0.15
LIMK1-202ENST00000418310 FPGT-TNNI3KV9GXZ4 949 aa14.11□□□□□ -0.15
LIMK1-202ENST00000418310 CACNA1FO60840 1977 aa14.11□□□□□ -0.15
LIMK1-202ENST00000418310 ERBB3P21860 1342 aa14.11□□□□□ -0.15
LIMK1-202ENST00000418310 EPB41L2O43491 1005 aaKnown RBP14.11□□□□□ -0.15
LIMK1-202ENST00000418310 TAF5LO75529 589 aa14.11□□□□□ -0.15
LIMK1-202ENST00000418310 TM6SF1Q9BZW5 370 aa14.11□□□□□ -0.15
LIMK1-202ENST00000418310 ZBTB3Q9H5J0 574 aa14.11□□□□□ -0.15
LIMK1-202ENST00000418310 NCOA5Q9HCD5 579 aaKnown RBP14.11□□□□□ -0.15
LIMK1-202ENST00000418310 NPHP3Q7Z494 1330 aa14.1□□□□□ -0.15
LIMK1-202ENST00000418310 NFAT5O94916 1531 aa14.1□□□□□ -0.15
LIMK1-202ENST00000418310 HIP1O00291 1037 aa14.1□□□□□ -0.15
LIMK1-202ENST00000418310 MAP3K11Q16584 847 aa14.1□□□□□ -0.15
LIMK1-202ENST00000418310 ANO6Q4KMQ2 910 aa14.1□□□□□ -0.15
LIMK1-202ENST00000418310 PTPN12Q05209 780 aaKnown RBP14.1□□□□□ -0.15
LIMK1-202ENST00000418310 NEK1Q96PY6 1258 aa14.1□□□□□ -0.15
LIMK1-202ENST00000418310 METTL22Q9BUU2 404 aaPredicted RBP14.1□□□□□ -0.15
LIMK1-202ENST00000418310 SNRKQ9NRH2 765 aa14.1□□□□□ -0.15
LIMK1-202ENST00000418310 COL15A1P39059 1388 aa14.1□□□□□ -0.15
LIMK1-202ENST00000418310 NR1I2O75469 434 aa14.09□□□□□ -0.15
LIMK1-202ENST00000418310 PTGS1P23219 599 aa14.09□□□□□ -0.15
LIMK1-202ENST00000418310 TYRO3Q06418 890 aa14.09□□□□□ -0.15
LIMK1-202ENST00000418310 LETM1O95202 739 aaPredicted RBP14.09□□□□□ -0.15
LIMK1-202ENST00000418310 CYP21A2P08686 494 aa14.09□□□□□ -0.15
LIMK1-202ENST00000418310 MCM5P33992 734 aa14.09□□□□□ -0.15
LIMK1-202ENST00000418310 ZMYND15Q9H091 742 aa14.09□□□□□ -0.15
LIMK1-202ENST00000418310 PDCL3Q9H2J4 239 aa14.09□□□□□ -0.15
LIMK1-202ENST00000418310 PHKG2P15735 406 aa14.09□□□□□ -0.15
LIMK1-202ENST00000418310 DNAJC25Q9H1X3 360 aa14.09□□□□□ -0.15
LIMK1-202ENST00000418310 CABP4P57796 275 aa14.08□□□□□ -0.15
LIMK1-202ENST00000418310 APOBRQ0VD83 1088 aa14.08□□□□□ -0.15
LIMK1-202ENST00000418310 LRMPQ12912 555 aa14.08□□□□□ -0.15
LIMK1-202ENST00000418310 UVSSAQ2YD98 709 aa14.08□□□□□ -0.15
LIMK1-202ENST00000418310 FUCA2Q9BTY2 467 aa14.08□□□□□ -0.15
LIMK1-202ENST00000418310 NRBP1Q9UHY1 535 aa14.08□□□□□ -0.15
LIMK1-202ENST00000418310 TRIM5Q9C035 493 aa14.08□□□□□ -0.16
LIMK1-202ENST00000418310 PRDM10Q9NQV6 1147 aa14.08□□□□□ -0.16
LIMK1-202ENST00000418310 FER1L4A9Z1Z3 1794 aa14.08□□□□□ -0.16
LIMK1-202ENST00000418310 HAND2P61296 217 aa14.08□□□□□ -0.16
LIMK1-202ENST00000418310 TTLL7Q6ZT98 887 aa14.08□□□□□ -0.16
LIMK1-202ENST00000418310 LEO1Q8WVC0 666 aaPredicted RBP14.08□□□□□ -0.16
LIMK1-202ENST00000418310 PIBF1Q8WXW3 757 aa14.08□□□□□ -0.16
LIMK1-202ENST00000418310 KCNF1Q9H3M0 494 aa14.08□□□□□ -0.16
LIMK1-202ENST00000418310 CYP27B1O15528 508 aa14.07□□□□□ -0.16
LIMK1-202ENST00000418310 PDCP20941 246 aa14.07□□□□□ -0.16
LIMK1-202ENST00000418310 MRVI1Q9Y6F6 885 aa14.07□□□□□ -0.16
LIMK1-202ENST00000418310 NPHP4O75161 1426 aaPredicted RBP14.07□□□□□ -0.16
LIMK1-202ENST00000418310 A1BGP04217 495 aa14.06□□□□□ -0.16
LIMK1-202ENST00000418310 SNRPA1P09661 255 aaKnown RBP14.06□□□□□ -0.16
LIMK1-202ENST00000418310 FKBP4Q02790 459 aaKnown RBP eCLIP14.06□□□□□ -0.16
LIMK1-202ENST00000418310 TTLL5Q6EMB2 1281 aa14.06□□□□□ -0.16
LIMK1-202ENST00000418310 STOX1Q6ZVD7 989 aa14.06□□□□□ -0.16
LIMK1-202ENST00000418310 ANKRD1Q15327 319 aa14.06□□□□□ -0.16
LIMK1-202ENST00000418310 OTUD7BQ6GQQ9 843 aa14.06□□□□□ -0.16
LIMK1-202ENST00000418310 CCDC186Q7Z3E2 898 aa14.06□□□□□ -0.16
LIMK1-202ENST00000418310 IFNL2Q8IZJ0 200 aa14.06□□□□□ -0.16
LIMK1-202ENST00000418310 PGBD1Q96JS3 809 aa14.06□□□□□ -0.16
LIMK1-202ENST00000418310 CBX8Q9HC52 389 aa14.06□□□□□ -0.16
LIMK1-202ENST00000418310 GPHNQ9NQX3 736 aaPredicted RBP14.06□□□□□ -0.16
LIMK1-202ENST00000418310 ADGRL3Q9HAR2 1447 aa14.06□□□□□ -0.16
LIMK1-202ENST00000418310 SCRN1Q12765 414 aa14.06□□□□□ -0.16
LIMK1-202ENST00000418310 LRRC24Q50LG9 513 aa14.06□□□□□ -0.16
LIMK1-202ENST00000418310 ZNF609O15014 1411 aa14.05□□□□□ -0.16
LIMK1-202ENST00000418310 MED23Q9ULK4 1368 aa14.05□□□□□ -0.16
LIMK1-202ENST00000418310 FAM200AQ8TCP9 573 aa14.05□□□□□ -0.16
LIMK1-202ENST00000418310 MED1Q15648 1581 aaPredicted RBP14.05□□□□□ -0.16
LIMK1-202ENST00000418310 KDM6AO15550 1401 aaPredicted RBP14.05□□□□□ -0.16
LIMK1-202ENST00000418310 KCNB2Q92953 911 aa14.05□□□□□ -0.16
LIMK1-202ENST00000418310 GTF3C6Q969F1 213 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms