RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 SHROOM2Q13796 1616 aa8.56□□□□□ -1.04
SMCO1-201ENST00000397537 ANP32CO43423 234 aa8.55□□□□□ -1.04
SMCO1-201ENST00000397537 POU5F1Q01860 360 aaKnown RBP8.55□□□□□ -1.04
SMCO1-201ENST00000397537 RAPGEF1Q13905 1077 aa8.55□□□□□ -1.04
SMCO1-201ENST00000397537 C16orf86Q6ZW13 317 aa8.55□□□□□ -1.04
SMCO1-201ENST00000397537 PDILTQ8N807 584 aa8.55□□□□□ -1.04
SMCO1-201ENST00000397537 OCSTAMPQ9BR26 566 aa8.55□□□□□ -1.04
SMCO1-201ENST00000397537 PCDHGA11Q9Y5H2 935 aa8.55□□□□□ -1.04
SMCO1-201ENST00000397537 TBX3O15119 743 aa8.54□□□□□ -1.04
SMCO1-201ENST00000397537 KCNQ2O43526 872 aa8.54□□□□□ -1.04
SMCO1-201ENST00000397537 SLC34A2O95436 690 aa8.54□□□□□ -1.04
SMCO1-201ENST00000397537 SCGB1D2O95969 90 aa8.54□□□□□ -1.04
SMCO1-201ENST00000397537 SLC10A3P09131 477 aa8.54□□□□□ -1.04
SMCO1-201ENST00000397537 POTEJP0CG39 1038 aa8.54□□□□□ -1.04
SMCO1-201ENST00000397537 SAP130Q9H0E3 1048 aa8.54□□□□□ -1.04
SMCO1-201ENST00000397537 ZNF700Q9H0M5 742 aa8.54□□□□□ -1.04
SMCO1-201ENST00000397537 ZHX3Q9H4I2 956 aa8.54□□□□□ -1.04
SMCO1-201ENST00000397537 TSKSQ9UJT2 592 aa8.54□□□□□ -1.04
SMCO1-201ENST00000397537 LZTS1Q9Y250 596 aa8.54□□□□□ -1.04
SMCO1-201ENST00000397537 PCDHB9Q9Y5E1 797 aa8.54□□□□□ -1.04
SMCO1-201ENST00000397537 COL17A1Q9UMD9 1497 aaPredicted RBP8.54□□□□□ -1.04
SMCO1-201ENST00000397537 LDHCP07864 332 aa8.54□□□□□ -1.04
SMCO1-201ENST00000397537 NASPP49321 788 aaPredicted RBP8.54□□□□□ -1.04
SMCO1-201ENST00000397537 RASSF7Q02833 373 aa8.54□□□□□ -1.04
SMCO1-201ENST00000397537 TMEM95Q3KNT9 176 aa8.54□□□□□ -1.04
SMCO1-201ENST00000397537 INO80DQ53TQ3 878 aaPredicted RBP8.54□□□□□ -1.04
SMCO1-201ENST00000397537 NKX2-3Q8TAU0 364 aa8.54□□□□□ -1.04
SMCO1-201ENST00000397537 EMID1Q96A84 441 aaPredicted RBP8.54□□□□□ -1.04
SMCO1-201ENST00000397537 RUNDC1Q96C34 613 aa8.54□□□□□ -1.04
SMCO1-201ENST00000397537 COPRSQ9NQ92 184 aa8.54□□□□□ -1.04
SMCO1-201ENST00000397537 SHTN1A0MZ66 631 aa8.53□□□□□ -1.04
SMCO1-201ENST00000397537 OXLD1Q5BKU9 147 aa8.53□□□□□ -1.04
SMCO1-201ENST00000397537 LYPD8Q6UX82 237 aa8.53□□□□□ -1.04
SMCO1-201ENST00000397537 PAF1Q8N7H5 531 aa8.53□□□□□ -1.04
SMCO1-201ENST00000397537 LEMD3Q9Y2U8 911 aa8.53□□□□□ -1.04
SMCO1-201ENST00000397537 USP31Q70CQ4 1352 aa8.53□□□□□ -1.04
SMCO1-201ENST00000397537 RPGRIP1LQ68CZ1 1315 aa8.52□□□□□ -1.04
SMCO1-201ENST00000397537 DALRD3Q5D0E6 543 aaKnown RBP8.52□□□□□ -1.04
SMCO1-201ENST00000397537 MEI1Q5TIA1 1274 aa8.52□□□□□ -1.04
SMCO1-201ENST00000397537 ZDHHC16Q969W1 377 aa8.52□□□□□ -1.04
SMCO1-201ENST00000397537 ADAM33Q9BZ11 813 aa8.52□□□□□ -1.04
SMCO1-201ENST00000397537 PPCSQ9HAB8 311 aa8.52□□□□□ -1.04
SMCO1-201ENST00000397537 DOLKQ9UPQ8 538 aa8.52□□□□□ -1.04
SMCO1-201ENST00000397537 PPRC1Q5VV67 1664 aaKnown RBP8.52□□□□□ -1.05
SMCO1-201ENST00000397537 ATF3P18847 181 aa8.52□□□□□ -1.05
SMCO1-201ENST00000397537 RBM10P98175 930 aaKnown RBP8.52□□□□□ -1.05
SMCO1-201ENST00000397537 MCL1Q07820 350 aa8.52□□□□□ -1.05
SMCO1-201ENST00000397537 DESI1Q6ICB0 168 aa8.52□□□□□ -1.05
SMCO1-201ENST00000397537 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.52□□□□□ -1.05
SMCO1-201ENST00000397537 ERMP1Q7Z2K6 904 aa8.52□□□□□ -1.05
SMCO1-201ENST00000397537 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.52□□□□□ -1.05
SMCO1-201ENST00000397537 ENOX1Q8TC92 643 aaKnown RBP8.52□□□□□ -1.05
SMCO1-201ENST00000397537 PTPRHQ9HD43 1115 aa8.52□□□□□ -1.05
SMCO1-201ENST00000397537 MSRB2Q9Y3D2 182 aa8.52□□□□□ -1.05
SMCO1-201ENST00000397537 TOP2AP11388 1531 aaKnown RBP8.52□□□□□ -1.05
SMCO1-201ENST00000397537 NUP160Q12769 1436 aa8.51□□□□□ -1.05
SMCO1-201ENST00000397537 NPHP1O15259 732 aa8.51□□□□□ -1.05
SMCO1-201ENST00000397537 TIMM44O43615 452 aa8.51□□□□□ -1.05
SMCO1-201ENST00000397537 PODNQ7Z5L7 613 aa8.51□□□□□ -1.05
SMCO1-201ENST00000397537 DDX42Q86XP3 938 aaKnown RBP eCLIP8.51□□□□□ -1.05
SMCO1-201ENST00000397537 FBF1Q8TES7 1133 aa8.51□□□□□ -1.05
SMCO1-201ENST00000397537 ESPNB1AK53 854 aa8.5□□□□□ -1.05
SMCO1-201ENST00000397537 EIF4BP23588 611 aaKnown RBP8.5□□□□□ -1.05
SMCO1-201ENST00000397537 SIM2Q14190 667 aaPredicted RBP8.5□□□□□ -1.05
SMCO1-201ENST00000397537 KCTD2Q14681 263 aa8.5□□□□□ -1.05
SMCO1-201ENST00000397537 CCDC174Q6PII3 467 aa8.5□□□□□ -1.05
SMCO1-201ENST00000397537 MYO1HQ8N1T3 1032 aa8.5□□□□□ -1.05
SMCO1-201ENST00000397537 MRPS23Q9Y3D9 190 aaKnown RBP8.5□□□□□ -1.05
SMCO1-201ENST00000397537 PBRM1Q86U86 1689 aa8.5□□□□□ -1.05
SMCO1-201ENST00000397537 ERBB3P21860 1342 aa8.5□□□□□ -1.05
SMCO1-201ENST00000397537 GRIN2AQ12879 1464 aa8.5□□□□□ -1.05
SMCO1-201ENST00000397537 ADCY10Q96PN6 1610 aa8.5□□□□□ -1.05
SMCO1-201ENST00000397537 A6NJY4 79 aa8.5□□□□□ -1.05
SMCO1-201ENST00000397537 CALRP27797 417 aaKnown RBP8.5□□□□□ -1.05
SMCO1-201ENST00000397537 CNGA1P29973 690 aa8.5□□□□□ -1.05
SMCO1-201ENST00000397537 CTHP32929 405 aa8.5□□□□□ -1.05
SMCO1-201ENST00000397537 FUT2Q10981 343 aa8.5□□□□□ -1.05
SMCO1-201ENST00000397537 GLIPR1L2Q4G1C9 344 aa8.5□□□□□ -1.05
SMCO1-201ENST00000397537 KSR2Q6VAB6 950 aa8.5□□□□□ -1.05
SMCO1-201ENST00000397537 TTC8Q8TAM2 541 aa8.5□□□□□ -1.05
SMCO1-201ENST00000397537 TATDN2Q93075 761 aa8.5□□□□□ -1.05
SMCO1-201ENST00000397537 PNMA3Q9UL41 463 aa8.5□□□□□ -1.05
SMCO1-201ENST00000397537 WASHC2CQ9Y4E1 1318 aa8.49□□□□□ -1.05
SMCO1-201ENST00000397537 PRG4Q92954 1404 aaPredicted RBP8.49□□□□□ -1.05
SMCO1-201ENST00000397537 ACBD5Q5T8D3 534 aaPredicted RBP8.49□□□□□ -1.05
SMCO1-201ENST00000397537 RETREG3Q86VR2 466 aa8.49□□□□□ -1.05
SMCO1-201ENST00000397537 SPNS2Q8IVW8 549 aa8.49□□□□□ -1.05
SMCO1-201ENST00000397537 CHPFQ8IZ52 775 aa8.49□□□□□ -1.05
SMCO1-201ENST00000397537 IFNL3Q8IZI9 196 aa8.49□□□□□ -1.05
SMCO1-201ENST00000397537 MYRIPQ8NFW9 859 aa8.49□□□□□ -1.05
SMCO1-201ENST00000397537 E2F7Q96AV8 911 aa8.49□□□□□ -1.05
SMCO1-201ENST00000397537 AS3MTQ9HBK9 375 aa8.49□□□□□ -1.05
SMCO1-201ENST00000397537 CCDC163A0A0D9SF12 145 aa8.48□□□□□ -1.05
SMCO1-201ENST00000397537 F12P00748 615 aaPredicted RBP8.48□□□□□ -1.05
SMCO1-201ENST00000397537 TRAPPC10P48553 1259 aa8.48□□□□□ -1.05
SMCO1-201ENST00000397537 RAB27AP51159 221 aa8.48□□□□□ -1.05
SMCO1-201ENST00000397537 HLTFQ14527 1009 aaKnown RBP eCLIP8.48□□□□□ -1.05
SMCO1-201ENST00000397537 GRAMD1BQ3KR37 738 aa8.48□□□□□ -1.05
SMCO1-201ENST00000397537 GET4Q7L5D6 327 aaPredicted RBP8.48□□□□□ -1.05
SMCO1-201ENST00000397537 CELF2-AS1Q8N7Q2 184 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms