RNA–Protein interactions for RNA: ENST00000397081.7

RAPGEF4-201, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-201ENST00000397081 CPS1P31327 1500 aa17.3■□□□□ 0.36
RAPGEF4-201ENST00000397081 COL9A3Q14050 684 aaPredicted RBP17.3■□□□□ 0.36
RAPGEF4-201ENST00000397081 LEO1Q8WVC0 666 aaPredicted RBP17.3■□□□□ 0.36
RAPGEF4-201ENST00000397081 NEK1Q96PY6 1258 aa17.3■□□□□ 0.36
RAPGEF4-201ENST00000397081 ORAI2Q96SN7 254 aa17.3■□□□□ 0.36
RAPGEF4-201ENST00000397081 ZC3H6P61129 1189 aaKnown RBP17.3■□□□□ 0.36
RAPGEF4-201ENST00000397081 STK38Q15208 465 aa17.3■□□□□ 0.36
RAPGEF4-201ENST00000397081 OTUD7BQ6GQQ9 843 aa17.3■□□□□ 0.36
RAPGEF4-201ENST00000397081 FSIP1Q8NA03 581 aa17.3■□□□□ 0.36
RAPGEF4-201ENST00000397081 ATP2B1P20020 1258 aa17.29■□□□□ 0.36
RAPGEF4-201ENST00000397081 PLEKHO1Q53GL0 409 aaPredicted RBP17.29■□□□□ 0.36
RAPGEF4-201ENST00000397081 HIP1O00291 1037 aa17.29■□□□□ 0.36
RAPGEF4-201ENST00000397081 TTC14Q96N46 770 aa17.29■□□□□ 0.36
RAPGEF4-201ENST00000397081 AOPEPQ8N6M6 819 aa17.29■□□□□ 0.36
RAPGEF4-201ENST00000397081 CFAP45Q9UL16 551 aa17.29■□□□□ 0.36
RAPGEF4-201ENST00000397081 FER1L4A9Z1Z3 1794 aa17.28■□□□□ 0.36
RAPGEF4-201ENST00000397081 FKBP4Q02790 459 aaKnown RBP eCLIP17.28■□□□□ 0.36
RAPGEF4-201ENST00000397081 UBE3BQ7Z3V4 1068 aa17.28■□□□□ 0.36
RAPGEF4-201ENST00000397081 PTPRUQ92729 1446 aa17.28■□□□□ 0.36
RAPGEF4-201ENST00000397081 SUCLG2Q96I99 432 aa17.28■□□□□ 0.36
RAPGEF4-201ENST00000397081 CHMP4AQ9BY43 222 aa17.28■□□□□ 0.36
RAPGEF4-201ENST00000397081 SNRKQ9NRH2 765 aa17.28■□□□□ 0.36
RAPGEF4-201ENST00000397081 TOMM22Q9NS69 142 aa17.28■□□□□ 0.36
RAPGEF4-201ENST00000397081 MAP3K5Q99683 1374 aa17.28■□□□□ 0.36
RAPGEF4-201ENST00000397081 MAP2P11137 1827 aaKnown RBP17.28■□□□□ 0.36
RAPGEF4-201ENST00000397081 APOBRQ0VD83 1088 aa17.28■□□□□ 0.36
RAPGEF4-201ENST00000397081 ZNF589Q86UQ0 364 aaPredicted RBP17.28■□□□□ 0.36
RAPGEF4-201ENST00000397081 SIRT1Q96EB6 747 aa17.28■□□□□ 0.36
RAPGEF4-201ENST00000397081 NPHP3Q7Z494 1330 aa17.28■□□□□ 0.36
RAPGEF4-201ENST00000397081 APPP05067 770 aa17.27■□□□□ 0.36
RAPGEF4-201ENST00000397081 ZNF75DP51815 510 aa17.27■□□□□ 0.36
RAPGEF4-201ENST00000397081 SLFNL1Q499Z3 407 aa17.27■□□□□ 0.36
RAPGEF4-201ENST00000397081 BEND3Q5T5X7 828 aa17.27■□□□□ 0.36
RAPGEF4-201ENST00000397081 PDILTQ8N807 584 aa17.27■□□□□ 0.36
RAPGEF4-201ENST00000397081 RIMS1Q86UR5 1692 aaKnown RBP17.27■□□□□ 0.36
RAPGEF4-201ENST00000397081 ATP7BP35670 1465 aa17.27■□□□□ 0.36
RAPGEF4-201ENST00000397081 GOLIM4O00461 696 aa17.27■□□□□ 0.36
RAPGEF4-201ENST00000397081 ZSCAN25Q6NSZ9 544 aa17.27■□□□□ 0.36
RAPGEF4-201ENST00000397081 GRM8O00222 908 aa17.27■□□□□ 0.35
RAPGEF4-201ENST00000397081 NBPF6Q5VWK0 638 aa17.27■□□□□ 0.35
RAPGEF4-201ENST00000397081 CACTINQ8WUQ7 758 aaKnown RBP17.27■□□□□ 0.35
RAPGEF4-201ENST00000397081 NBPF4Q96M43 638 aa17.27■□□□□ 0.35
RAPGEF4-201ENST00000397081 HSP90AB3PQ58FF7 597 aa17.27■□□□□ 0.35
RAPGEF4-201ENST00000397081 TTC5Q8N0Z6 440 aa17.27■□□□□ 0.35
RAPGEF4-201ENST00000397081 ZSWIM6Q9HCJ5 1215 aa17.27■□□□□ 0.35
RAPGEF4-201ENST00000397081 SYNE3Q6ZMZ3 975 aa17.26■□□□□ 0.35
RAPGEF4-201ENST00000397081 DDX17Q92841 729 aaKnown RBP17.26■□□□□ 0.35
RAPGEF4-201ENST00000397081 CPSF1Q10570 1443 aaKnown RBP17.26■□□□□ 0.35
RAPGEF4-201ENST00000397081 TPM4P67936 248 aa17.26■□□□□ 0.35
RAPGEF4-201ENST00000397081 PTPN21Q16825 1174 aa17.26■□□□□ 0.35
RAPGEF4-201ENST00000397081 TAF7LQ5H9L4 462 aa17.26■□□□□ 0.35
RAPGEF4-201ENST00000397081 CEP57L1Q8IYX8 460 aa17.26■□□□□ 0.35
RAPGEF4-201ENST00000397081 CCDC69A6NI79 296 aa17.26■□□□□ 0.35
RAPGEF4-201ENST00000397081 EIF4A1P60842 406 aaKnown RBP17.26■□□□□ 0.35
RAPGEF4-201ENST00000397081 TMC6Q7Z403 805 aa17.26■□□□□ 0.35
RAPGEF4-201ENST00000397081 TTC41PQ6P2S7 1318 aa17.25■□□□□ 0.35
RAPGEF4-201ENST00000397081 A0A1B0GVL5 298 aa17.25■□□□□ 0.35
RAPGEF4-201ENST00000397081 RPS6KB1P23443 525 aa17.25■□□□□ 0.35
RAPGEF4-201ENST00000397081 PLEKHG3A1L390 1219 aa17.24■□□□□ 0.35
RAPGEF4-201ENST00000397081 MNS1Q8NEH6 495 aa17.24■□□□□ 0.35
RAPGEF4-201ENST00000397081 COPS6Q7L5N1 327 aa17.24■□□□□ 0.35
RAPGEF4-201ENST00000397081 CRB1P82279 1406 aa17.24■□□□□ 0.35
RAPGEF4-201ENST00000397081 POLR3GO15318 223 aaPredicted RBP17.24■□□□□ 0.35
RAPGEF4-201ENST00000397081 KSR2Q6VAB6 950 aa17.24■□□□□ 0.35
RAPGEF4-201ENST00000397081 SSH2Q76I76 1423 aa17.23■□□□□ 0.35
RAPGEF4-201ENST00000397081 TTLL5Q6EMB2 1281 aa17.23■□□□□ 0.35
RAPGEF4-201ENST00000397081 ELF2Q15723 593 aa17.23■□□□□ 0.35
RAPGEF4-201ENST00000397081 KIF18AQ8NI77 898 aa17.23■□□□□ 0.35
RAPGEF4-201ENST00000397081 XAGE3Q8WTP9 111 aa17.23■□□□□ 0.35
RAPGEF4-201ENST00000397081 SETD1BQ9UPS6 1966 aaKnown RBP17.23■□□□□ 0.35
RAPGEF4-201ENST00000397081 SALL3Q9BXA9 1300 aa17.23■□□□□ 0.35
RAPGEF4-201ENST00000397081 SERPINC1P01008 464 aa17.23■□□□□ 0.35
RAPGEF4-201ENST00000397081 RAPGEF4Q8WZA2 1011 aa17.23■□□□□ 0.35
RAPGEF4-201ENST00000397081 NAT10Q9H0A0 1025 aaKnown RBP17.23■□□□□ 0.35
RAPGEF4-201ENST00000397081 ZNF215Q9UL58 517 aaPredicted RBP17.23■□□□□ 0.35
RAPGEF4-201ENST00000397081 LMOD1P29536 600 aaPredicted RBP17.22■□□□□ 0.35
RAPGEF4-201ENST00000397081 TFCP2Q12800 502 aa17.22■□□□□ 0.35
RAPGEF4-201ENST00000397081 SBNO1A3KN83 1393 aa17.22■□□□□ 0.35
RAPGEF4-201ENST00000397081 CCDC144BQ3MJ40 725 aa17.22■□□□□ 0.35
RAPGEF4-201ENST00000397081 C11orf57Q6ZUT1 292 aaPredicted RBP17.22■□□□□ 0.35
RAPGEF4-201ENST00000397081 CCDC144CPQ8IYA2 1237 aa17.22■□□□□ 0.35
RAPGEF4-201ENST00000397081 CLSTN2Q9H4D0 955 aa17.22■□□□□ 0.35
RAPGEF4-201ENST00000397081 A0A087WZG4 1122 aa17.21■□□□□ 0.35
RAPGEF4-201ENST00000397081 DMTNQ08495 405 aa17.21■□□□□ 0.35
RAPGEF4-201ENST00000397081 ZNF396Q96N95 335 aaPredicted RBP17.21■□□□□ 0.35
RAPGEF4-201ENST00000397081 DBNDD2Q9BQY9 259 aa17.21■□□□□ 0.35
RAPGEF4-201ENST00000397081 AOX1Q06278 1338 aa17.21■□□□□ 0.35
RAPGEF4-201ENST00000397081 C3P01024 1663 aa17.21■□□□□ 0.35
RAPGEF4-201ENST00000397081 SMTNL1A8MU46 457 aa17.21■□□□□ 0.35
RAPGEF4-201ENST00000397081 STX1AQ16623 288 aa17.21■□□□□ 0.35
RAPGEF4-201ENST00000397081 PRDM4Q9UKN5 801 aa17.21■□□□□ 0.35
RAPGEF4-201ENST00000397081 USP27XA6NNY8 438 aa17.21■□□□□ 0.35
RAPGEF4-201ENST00000397081 TMEM87AQ8NBN3 555 aa17.21■□□□□ 0.35
RAPGEF4-201ENST00000397081 PTPDC1A2A3K4 754 aa17.21■□□□□ 0.34
RAPGEF4-201ENST00000397081 SFPQP23246 707 aaKnown RBP eCLIP17.21■□□□□ 0.34
RAPGEF4-201ENST00000397081 MARCKSP29966 332 aaPredicted RBP17.21■□□□□ 0.34
RAPGEF4-201ENST00000397081 KRT32Q14532 448 aa17.21■□□□□ 0.34
RAPGEF4-201ENST00000397081 NECTIN1Q15223 517 aa17.21■□□□□ 0.34
RAPGEF4-201ENST00000397081 CCDC82Q8N4S0 544 aa17.21■□□□□ 0.34
RAPGEF4-201ENST00000397081 GTF3C6Q969F1 213 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms