RNA–Protein interactions for RNA: ENST00000383960.1

RNU1-109P-201, Transcript of RNA, U1 small nuclear 109, pseudogene, humanhuman

BASIC

Gene RNU1-109P, Length 147 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-109P-201ENST00000383960 STIP1P31948 543 aaKnown RBP3.23□□□□□ -1.89
RNU1-109P-201ENST00000383960 PIK3CAP42336 1068 aa3.23□□□□□ -1.89
RNU1-109P-201ENST00000383960 ABL2P42684 1182 aa3.23□□□□□ -1.89
RNU1-109P-201ENST00000383960 MARSP56192 900 aaKnown RBP3.23□□□□□ -1.89
RNU1-109P-201ENST00000383960 BMS1Q14692 1282 aaKnown RBP3.23□□□□□ -1.89
RNU1-109P-201ENST00000383960 SEPT2Q15019 361 aa3.23□□□□□ -1.89
RNU1-109P-201ENST00000383960 ZSCAN26Q16670 478 aa3.23□□□□□ -1.89
RNU1-109P-201ENST00000383960 CCDC158Q5M9N0 1113 aa3.23□□□□□ -1.89
RNU1-109P-201ENST00000383960 JAKMIP3Q5VZ66 844 aa3.23□□□□□ -1.89
RNU1-109P-201ENST00000383960 CCSAPQ6IQ19 270 aaPredicted RBP3.23□□□□□ -1.89
RNU1-109P-201ENST00000383960 BLOC1S3Q6QNY0 202 aa3.23□□□□□ -1.89
RNU1-109P-201ENST00000383960 DAAM2Q86T65 1068 aa3.23□□□□□ -1.89
RNU1-109P-201ENST00000383960 SKAP1Q86WV1 359 aa3.23□□□□□ -1.89
RNU1-109P-201ENST00000383960 NPAS4Q8IUM7 802 aa3.23□□□□□ -1.89
RNU1-109P-201ENST00000383960 NLGN1Q8N2Q7 840 aa3.23□□□□□ -1.89
RNU1-109P-201ENST00000383960 KIAA1958Q8N8K9 716 aa3.23□□□□□ -1.89
RNU1-109P-201ENST00000383960 PRPF38AQ8NAV1 312 aaKnown RBP3.23□□□□□ -1.89
RNU1-109P-201ENST00000383960 FAM184AQ8NB25 1140 aa3.23□□□□□ -1.89
RNU1-109P-201ENST00000383960 CCDC191Q8NCU4 936 aa3.23□□□□□ -1.89
RNU1-109P-201ENST00000383960 NGDNQ8NEJ9 315 aaKnown RBP3.23□□□□□ -1.89
RNU1-109P-201ENST00000383960 TBC1D22AQ8WUA7 517 aa3.23□□□□□ -1.89
RNU1-109P-201ENST00000383960 SYMPKQ92797 1274 aaKnown RBP3.23□□□□□ -1.89
RNU1-109P-201ENST00000383960 VMP1Q96GC9 406 aa3.23□□□□□ -1.89
RNU1-109P-201ENST00000383960 GJD4Q96KN9 370 aaPredicted RBP3.23□□□□□ -1.89
RNU1-109P-201ENST00000383960 GBP4Q96PP9 640 aa3.23□□□□□ -1.89
RNU1-109P-201ENST00000383960 UIMC1Q96RL1 719 aa3.23□□□□□ -1.89
RNU1-109P-201ENST00000383960 MPHOSPH6Q99547 160 aaKnown RBP3.23□□□□□ -1.89
RNU1-109P-201ENST00000383960 TRIM6Q9C030 488 aaPredicted RBP3.23□□□□□ -1.89
RNU1-109P-201ENST00000383960 DHX36Q9H2U1 1008 aaKnown RBP3.23□□□□□ -1.89
RNU1-109P-201ENST00000383960 PCDH12Q9NPG4 1184 aa3.23□□□□□ -1.89
RNU1-109P-201ENST00000383960 DDX56Q9NY93 547 aaKnown RBP3.23□□□□□ -1.89
RNU1-109P-201ENST00000383960 COG6Q9Y2V7 657 aa3.23□□□□□ -1.89
RNU1-109P-201ENST00000383960 TMEM110-MUSTN1A8MSY1 372 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 IFRD1O00458 451 aaPredicted RBP3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 RNF40O75150 1001 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 KIAA0754O94854 1291 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 RECKO95980 971 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 RPN1P04843 607 aaKnown RBP3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 USP17L8P0C7I0 530 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 RBP3P10745 1247 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 LMNB1P20700 586 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 GUCY2CP25092 1073 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 GTF2F1P35269 517 aaKnown RBP eCLIP3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 CASP2P42575 452 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 TRAPPC10P48553 1259 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 SRPK2P78362 688 aaKnown RBP3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 CTDSPL2Q05D32 466 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 CCDC15Q0P6D6 951 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 TRAF1Q13077 416 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 EIF2B5Q13144 721 aaKnown RBP3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 RAPGEF1Q13905 1077 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 BRD3Q15059 726 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 TAF11Q15544 211 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 SEPT7Q16181 437 aaKnown RBP3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 LONRF1Q17RB8 773 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 MAP9Q49MG5 647 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 DESI1Q6ICB0 168 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 RNF19BQ6ZMZ0 732 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 NYAP1Q6ZVC0 841 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 WAPLQ7Z5K2 1190 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 CCDC91Q7Z6B0 441 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 RETREG3Q86VR2 466 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 RELL1Q8IUW5 271 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 SCUBE3Q8IX30 993 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 CHPFQ8IZ52 775 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 SAMD14Q8IZD0 417 aaPredicted RBP3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 MYOCDQ8IZQ8 938 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 STAG2Q8N3U4 1231 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 ARL6IP6Q8N6S5 226 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 GOLGA6L1Q8N7Z2 621 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 PHC3Q8NDX5 983 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 GIMAP1Q8WWP7 306 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 DHX38Q92620 1227 aaKnown RBP3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 CENPTQ96BT3 561 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 C8orf48Q96LL4 319 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 MAP3K14Q99558 947 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 NOL10Q9BSC4 688 aaKnown RBP3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 PDGFDQ9GZP0 370 aaPredicted RBP3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 VEZTQ9HBM0 779 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 AVENQ9NQS1 362 aaPredicted RBP3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 COMMD8Q9NX08 183 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 HOXC10Q9NYD6 342 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 TMOD4Q9NZQ9 345 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 MKRN1Q9UHC7 482 aaKnown RBP3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 POLG2Q9UHN1 485 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 MKL2Q9ULH7 1088 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 SUFUQ9UMX1 484 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 ZNF232Q9UNY5 417 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 RABGAP1Q9Y3P9 1069 aa3.22□□□□□ -1.89
RNU1-109P-201ENST00000383960 RAD50Q92878 1312 aa3.21□□□□□ -1.89
RNU1-109P-201ENST00000383960 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.21□□□□□ -1.9
RNU1-109P-201ENST00000383960 CCDC163A0A0D9SF12 145 aa3.21□□□□□ -1.9
RNU1-109P-201ENST00000383960 TMEM238LA0A1B0GVL6 79 aa3.21□□□□□ -1.9
RNU1-109P-201ENST00000383960 A0A1W2PRQ8 180 aa3.21□□□□□ -1.9
RNU1-109P-201ENST00000383960 NUTM2BA6NNL0 878 aaPredicted RBP3.21□□□□□ -1.9
RNU1-109P-201ENST00000383960 NUTM2EB1AL46 878 aaPredicted RBP3.21□□□□□ -1.9
RNU1-109P-201ENST00000383960 C6orf229H3BNL8 230 aa3.21□□□□□ -1.9
RNU1-109P-201ENST00000383960 CHL1O00533 1208 aa3.21□□□□□ -1.9
RNU1-109P-201ENST00000383960 E2F6O75461 281 aa3.21□□□□□ -1.9
RNU1-109P-201ENST00000383960 RNASEH2AO75792 299 aaKnown RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms