RNA–Protein interactions for RNA: ENST00000375025.10

CCDC7-204, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 2,729 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-204ENST00000375025 ARHGAP35Q9NRY4 1499 aa3.41□□□□□ -1.86
CCDC7-204ENST00000375025 ADGBQ8N7X0 1667 aa3.4□□□□□ -1.86
CCDC7-204ENST00000375025 APBB1O00213 710 aa3.4□□□□□ -1.86
CCDC7-204ENST00000375025 FGFR3P22607 806 aa3.4□□□□□ -1.86
CCDC7-204ENST00000375025 MSX1P28360 303 aa3.4□□□□□ -1.86
CCDC7-204ENST00000375025 MLECQ14165 292 aa3.4□□□□□ -1.86
CCDC7-204ENST00000375025 NKAPLQ5M9Q1 402 aa3.4□□□□□ -1.86
CCDC7-204ENST00000375025 TMCO4Q5TGY1 634 aa3.4□□□□□ -1.86
CCDC7-204ENST00000375025 ARHGEF10LQ9HCE6 1279 aa3.4□□□□□ -1.86
CCDC7-204ENST00000375025 CHIC2Q9UKJ5 165 aa3.4□□□□□ -1.86
CCDC7-204ENST00000375025 SAMD9LQ8IVG5 1584 aa3.4□□□□□ -1.86
CCDC7-204ENST00000375025 RREB1Q92766 1687 aa3.4□□□□□ -1.86
CCDC7-204ENST00000375025 MIA2Q96PC5 1412 aa3.4□□□□□ -1.87
CCDC7-204ENST00000375025 AFF2P51816 1311 aa3.4□□□□□ -1.87
CCDC7-204ENST00000375025 BNIP3LO60238 219 aa3.4□□□□□ -1.87
CCDC7-204ENST00000375025 C4orf17Q53FE4 359 aa3.4□□□□□ -1.87
CCDC7-204ENST00000375025 FNBP4Q8N3X1 1017 aaPredicted RBP3.4□□□□□ -1.87
CCDC7-204ENST00000375025 C1orf216Q8TAB5 229 aa3.4□□□□□ -1.87
CCDC7-204ENST00000375025 KDM4CQ9H3R0 1056 aa3.4□□□□□ -1.87
CCDC7-204ENST00000375025 GGA1Q9UJY5 639 aa3.4□□□□□ -1.87
CCDC7-204ENST00000375025 PCDHB9Q9Y5E1 797 aa3.4□□□□□ -1.87
CCDC7-204ENST00000375025 RSPO4Q2I0M5 234 aaPredicted RBP3.39□□□□□ -1.87
CCDC7-204ENST00000375025 FOXD4L6Q3SYB3 417 aaPredicted RBP3.39□□□□□ -1.87
CCDC7-204ENST00000375025 FOXD4L3Q6VB84 417 aaPredicted RBP3.39□□□□□ -1.87
CCDC7-204ENST00000375025 NLRP8Q86W28 1048 aa3.39□□□□□ -1.87
CCDC7-204ENST00000375025 PPARGC1BQ86YN6 1023 aaKnown RBP3.39□□□□□ -1.87
CCDC7-204ENST00000375025 RNF135Q8IUD6 432 aa3.39□□□□□ -1.87
CCDC7-204ENST00000375025 ZNF295-AS1Q8N0V1 137 aa3.39□□□□□ -1.87
CCDC7-204ENST00000375025 CNKSR1Q969H4 720 aa3.39□□□□□ -1.87
CCDC7-204ENST00000375025 FAM117AQ9C073 453 aa3.39□□□□□ -1.87
CCDC7-204ENST00000375025 HCN2Q9UL51 889 aa3.39□□□□□ -1.87
CCDC7-204ENST00000375025 UBR1Q8IWV7 1749 aa3.39□□□□□ -1.87
CCDC7-204ENST00000375025 PATL2C9JE40 543 aaKnown RBP3.39□□□□□ -1.87
CCDC7-204ENST00000375025 E9PSI1 815 aa3.39□□□□□ -1.87
CCDC7-204ENST00000375025 BRD2P25440 801 aaKnown RBP3.39□□□□□ -1.87
CCDC7-204ENST00000375025 CTBSQ01459 385 aa3.39□□□□□ -1.87
CCDC7-204ENST00000375025 LCE3BQ5TA77 95 aa3.39□□□□□ -1.87
CCDC7-204ENST00000375025 KLF15Q9UIH9 416 aa3.39□□□□□ -1.87
CCDC7-204ENST00000375025 PREX2Q70Z35 1606 aa3.38□□□□□ -1.87
CCDC7-204ENST00000375025 RGPD3A6NKT7 1758 aaPredicted RBP3.38□□□□□ -1.87
CCDC7-204ENST00000375025 RGPD4Q7Z3J3 1758 aa3.38□□□□□ -1.87
CCDC7-204ENST00000375025 BMP4P12644 408 aa3.38□□□□□ -1.87
CCDC7-204ENST00000375025 KCNA6P17658 529 aa3.38□□□□□ -1.87
CCDC7-204ENST00000375025 GRIN2CQ14957 1233 aa3.38□□□□□ -1.87
CCDC7-204ENST00000375025 RHBDD1Q8TEB9 315 aa3.38□□□□□ -1.87
CCDC7-204ENST00000375025 ZSCAN10Q96SZ4 725 aaPredicted RBP3.38□□□□□ -1.87
CCDC7-204ENST00000375025 PCDHB11Q9Y5F2 797 aa3.38□□□□□ -1.87
CCDC7-204ENST00000375025 SHANK3Q9BYB0 1731 aa3.38□□□□□ -1.87
CCDC7-204ENST00000375025 ADGRB2O60241 1585 aa3.38□□□□□ -1.87
CCDC7-204ENST00000375025 KIAA1107Q9UPP5 1409 aa3.38□□□□□ -1.87
CCDC7-204ENST00000375025 EFHC2Q5JST6 749 aa3.38□□□□□ -1.87
CCDC7-204ENST00000375025 FIGNL1Q6PIW4 674 aa3.38□□□□□ -1.87
CCDC7-204ENST00000375025 PHTF2Q8N3S3 785 aa3.38□□□□□ -1.87
CCDC7-204ENST00000375025 PRDM6Q9NQX0 595 aa3.38□□□□□ -1.87
CCDC7-204ENST00000375025 TRPC5Q9UL62 973 aaPredicted RBP3.38□□□□□ -1.87
CCDC7-204ENST00000375025 A2MP01023 1474 aa3.38□□□□□ -1.87
CCDC7-204ENST00000375025 NCOA2Q15596 1464 aa3.38□□□□□ -1.87
CCDC7-204ENST00000375025 TMEM94Q12767 1356 aa3.38□□□□□ -1.87
CCDC7-204ENST00000375025 ESCO1Q5FWF5 840 aa3.37□□□□□ -1.87
CCDC7-204ENST00000375025 GNASQ5JWF2 1037 aa3.37□□□□□ -1.87
CCDC7-204ENST00000375025 CHSY3Q70JA7 882 aa3.37□□□□□ -1.87
CCDC7-204ENST00000375025 JMYQ8N9B5 988 aa3.37□□□□□ -1.87
CCDC7-204ENST00000375025 TRIM11Q96F44 468 aa3.37□□□□□ -1.87
CCDC7-204ENST00000375025 QTRT2Q9H974 415 aaKnown RBP3.37□□□□□ -1.87
CCDC7-204ENST00000375025 PCDHGC4Q9Y5F7 938 aa3.37□□□□□ -1.87
CCDC7-204ENST00000375025 SYCP2Q9BX26 1530 aa3.37□□□□□ -1.87
CCDC7-204ENST00000375025 MARF1Q9Y4F3 1742 aaKnown RBP3.37□□□□□ -1.87
CCDC7-204ENST00000375025 MSH6P52701 1360 aa3.37□□□□□ -1.87
CCDC7-204ENST00000375025 PTPN23Q9H3S7 1636 aa3.37□□□□□ -1.87
CCDC7-204ENST00000375025 A6NJR5 290 aa3.37□□□□□ -1.87
CCDC7-204ENST00000375025 SPATA31C1P0DKV0 1188 aa3.37□□□□□ -1.87
CCDC7-204ENST00000375025 ATP4AP20648 1035 aa3.37□□□□□ -1.87
CCDC7-204ENST00000375025 CANXP27824 592 aaKnown RBP3.37□□□□□ -1.87
CCDC7-204ENST00000375025 SAMD5Q5TGI4 173 aa3.37□□□□□ -1.87
CCDC7-204ENST00000375025 FCHSD1Q86WN1 690 aa3.37□□□□□ -1.87
CCDC7-204ENST00000375025 KRTAP19-1Q8IUB9 90 aa3.37□□□□□ -1.87
CCDC7-204ENST00000375025 BANK1Q8NDB2 785 aa3.37□□□□□ -1.87
CCDC7-204ENST00000375025 ABHD17AQ96GS6 310 aa3.37□□□□□ -1.87
CCDC7-204ENST00000375025 CCDC85AQ96PX6 553 aaPredicted RBP3.37□□□□□ -1.87
CCDC7-204ENST00000375025 MTMR7Q9Y216 660 aa3.37□□□□□ -1.87
CCDC7-204ENST00000375025 KIAA1210Q9ULL0 1709 aa3.37□□□□□ -1.87
CCDC7-204ENST00000375025 TNS1Q9HBL0 1735 aaKnown RBP3.36□□□□□ -1.87
CCDC7-204ENST00000375025 ADGRB3O60242 1522 aa3.36□□□□□ -1.87
CCDC7-204ENST00000375025 PLEKHD1A6NEE1 506 aa3.36□□□□□ -1.87
CCDC7-204ENST00000375025 FAM157BP0CG42 384 aa3.36□□□□□ -1.87
CCDC7-204ENST00000375025 CSB-PGBD3P0DP91 1061 aa3.36□□□□□ -1.87
CCDC7-204ENST00000375025 RBM25P49756 843 aaKnown RBP3.36□□□□□ -1.87
CCDC7-204ENST00000375025 MFAP1P55081 439 aaKnown RBP3.36□□□□□ -1.87
CCDC7-204ENST00000375025 TNP2Q05952 138 aa3.36□□□□□ -1.87
CCDC7-204ENST00000375025 PDE4CQ08493 712 aa3.36□□□□□ -1.87
CCDC7-204ENST00000375025 LAMC2Q13753 1193 aa3.36□□□□□ -1.87
CCDC7-204ENST00000375025 PGBD3Q8N328 593 aa3.36□□□□□ -1.87
CCDC7-204ENST00000375025 KRTAP9-9Q9BYP9 154 aa3.36□□□□□ -1.87
CCDC7-204ENST00000375025 KRTAP9-4Q9BYQ2 154 aa3.36□□□□□ -1.87
CCDC7-204ENST00000375025 RUBCNLQ9H714 662 aa3.36□□□□□ -1.87
CCDC7-204ENST00000375025 RRAGCQ9HB90 399 aa3.36□□□□□ -1.87
CCDC7-204ENST00000375025 SLAIN2Q9P270 581 aa3.36□□□□□ -1.87
CCDC7-204ENST00000375025 ZNF330Q9Y3S2 320 aaPredicted RBP3.36□□□□□ -1.87
CCDC7-204ENST00000375025 PNPLA6Q8IY17 1366 aa3.36□□□□□ -1.87
CCDC7-204ENST00000375025 CASZ1Q86V15 1759 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms