RNA–Protein interactions for RNA: ENST00000375025.10

CCDC7-204, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 2,729 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-204ENST00000375025 AEBP2Q6ZN18 517 aaPredicted RBP11.5□□□□□ -0.57
CCDC7-204ENST00000375025 CHIC1Q5VXU3 224 aa10.82□□□□□ -0.68
CCDC7-204ENST00000375025 SENP3Q9H4L4 574 aaPredicted RBP9.84□□□□□ -0.84
CCDC7-204ENST00000375025 PHF23Q9BUL5 403 aaPredicted RBP9.65□□□□□ -0.86
CCDC7-204ENST00000375025 FOXD1Q16676 465 aa9.17□□□□□ -0.94
CCDC7-204ENST00000375025 POTEDQ86YR6 584 aa8.66□□□□□ -1.02
CCDC7-204ENST00000375025 MSH5O43196 834 aa8.66□□□□□ -1.02
CCDC7-204ENST00000375025 PLPPR3Q6T4P5 718 aa8.54□□□□□ -1.04
CCDC7-204ENST00000375025 PIAS4Q8N2W9 510 aaPredicted RBP8.46□□□□□ -1.05
CCDC7-204ENST00000375025 PPP6R1Q9UPN7 881 aa8.44□□□□□ -1.06
CCDC7-204ENST00000375025 ADRA2BP18089 450 aa8.36□□□□□ -1.07
CCDC7-204ENST00000375025 DMRT2Q9Y5R5 561 aa7.81□□□□□ -1.16
CCDC7-204ENST00000375025 MAPK8IP2Q13387 824 aaPredicted RBP7.72□□□□□ -1.17
CCDC7-204ENST00000375025 SCAF1Q9H7N4 1312 aaKnown RBP7.69□□□□□ -1.18
CCDC7-204ENST00000375025 HOXD11P31277 338 aaPredicted RBP7.5□□□□□ -1.21
CCDC7-204ENST00000375025 PPP4R3CPQ6ZMV5 832 aa7.45□□□□□ -1.22
CCDC7-204ENST00000375025 CACNB1Q02641 598 aaPredicted RBP7.41□□□□□ -1.22
CCDC7-204ENST00000375025 RNF39Q9H2S5 420 aa7.38□□□□□ -1.23
CCDC7-204ENST00000375025 CNKSR2Q8WXI2 1034 aa7.38□□□□□ -1.23
CCDC7-204ENST00000375025 DNAJC5BQ9UF47 199 aa7.37□□□□□ -1.23
CCDC7-204ENST00000375025 RNF216Q9NWF9 866 aaPredicted RBP7.37□□□□□ -1.23
CCDC7-204ENST00000375025 C1QBPQ07021 282 aaKnown RBP7.27□□□□□ -1.25
CCDC7-204ENST00000375025 DCAF8L1A6NGE4 600 aa7.26□□□□□ -1.25
CCDC7-204ENST00000375025 NCBP3Q53F19 620 aaKnown RBP7.12□□□□□ -1.27
CCDC7-204ENST00000375025 NPM3O75607 178 aaKnown RBP7.03□□□□□ -1.28
CCDC7-204ENST00000375025 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.98□□□□□ -1.29
CCDC7-204ENST00000375025 U3KPZ7 1027 aaPredicted RBP6.91□□□□□ -1.3
CCDC7-204ENST00000375025 DSG3P32926 999 aa6.85□□□□□ -1.31
CCDC7-204ENST00000375025 SPINK5Q9NQ38 1064 aaPredicted RBP6.79□□□□□ -1.32
CCDC7-204ENST00000375025 SLC4A2P04920 1241 aa6.78□□□□□ -1.32
CCDC7-204ENST00000375025 CAPN15O75808 1086 aa6.73□□□□□ -1.33
CCDC7-204ENST00000375025 POTEHQ6S545 545 aa6.73□□□□□ -1.33
CCDC7-204ENST00000375025 KCNA4P22459 653 aa6.72□□□□□ -1.33
CCDC7-204ENST00000375025 APLP2Q06481 763 aa6.71□□□□□ -1.34
CCDC7-204ENST00000375025 ZNF219Q9P2Y4 722 aaPredicted RBP6.67□□□□□ -1.34
CCDC7-204ENST00000375025 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.66□□□□□ -1.34
CCDC7-204ENST00000375025 HNRNPUL2Q1KMD3 747 aaKnown RBP6.66□□□□□ -1.34
CCDC7-204ENST00000375025 SAMD1Q6SPF0 538 aaPredicted RBP6.61□□□□□ -1.35
CCDC7-204ENST00000375025 TRHP20396 242 aaPredicted RBP6.57□□□□□ -1.36
CCDC7-204ENST00000375025 ABCB7O75027 752 aa6.56□□□□□ -1.36
CCDC7-204ENST00000375025 RBM42Q9BTD8 480 aaKnown RBP6.53□□□□□ -1.36
CCDC7-204ENST00000375025 MYCNP04198 464 aaPredicted RBP6.52□□□□□ -1.37
CCDC7-204ENST00000375025 POLA2Q14181 598 aa6.41□□□□□ -1.38
CCDC7-204ENST00000375025 CHRDL2Q6WN34 429 aa6.41□□□□□ -1.38
CCDC7-204ENST00000375025 AKT1S1Q96B36 256 aa6.37□□□□□ -1.39
CCDC7-204ENST00000375025 FOXD4L1Q9NU39 408 aa6.36□□□□□ -1.39
CCDC7-204ENST00000375025 ZBTB12Q9Y330 459 aaPredicted RBP6.36□□□□□ -1.39
CCDC7-204ENST00000375025 ATF5Q9Y2D1 282 aaPredicted RBP6.34□□□□□ -1.39
CCDC7-204ENST00000375025 SLC4A1APQ9BWU0 796 aaKnown RBP6.31□□□□□ -1.4
CCDC7-204ENST00000375025 REM2Q8IYK8 340 aaPredicted RBP6.27□□□□□ -1.41
CCDC7-204ENST00000375025 SP7Q8TDD2 431 aaPredicted RBP6.27□□□□□ -1.41
CCDC7-204ENST00000375025 ATXN8OSP0DMR3 200 aa6.26□□□□□ -1.41
CCDC7-204ENST00000375025 FXR2P51116 673 aaKnown RBP eCLIP6.24□□□□□ -1.41
CCDC7-204ENST00000375025 PIP4P2Q8N4L2 257 aa6.24□□□□□ -1.41
CCDC7-204ENST00000375025 OSCARQ8IYS5 282 aa6.22□□□□□ -1.41
CCDC7-204ENST00000375025 ZBTB22O15209 634 aa6.22□□□□□ -1.41
CCDC7-204ENST00000375025 PITPNM1O00562 1244 aa6.2□□□□□ -1.42
CCDC7-204ENST00000375025 SPDYE2BA6NHP3 402 aa6.15□□□□□ -1.42
CCDC7-204ENST00000375025 SPDYE6P0CI01 402 aa6.15□□□□□ -1.42
CCDC7-204ENST00000375025 SPDYE2Q495Y8 402 aa6.15□□□□□ -1.42
CCDC7-204ENST00000375025 SSUH2Q9Y2M2 353 aa6.1□□□□□ -1.43
CCDC7-204ENST00000375025 FBLN2P98095 1184 aa6.08□□□□□ -1.44
CCDC7-204ENST00000375025 MKRN4PQ13434 485 aaPredicted RBP6.08□□□□□ -1.44
CCDC7-204ENST00000375025 HAX1O00165 279 aa6.07□□□□□ -1.44
CCDC7-204ENST00000375025 EVX2Q03828 476 aa6.06□□□□□ -1.44
CCDC7-204ENST00000375025 C19orf67A6NJJ6 358 aa6.05□□□□□ -1.44
CCDC7-204ENST00000375025 SPDYE1Q8NFV5 336 aaPredicted RBP6.05□□□□□ -1.44
CCDC7-204ENST00000375025 PRKAR2AP13861 404 aaKnown RBP6□□□□□ -1.45
CCDC7-204ENST00000375025 ZNF692Q9BU19 519 aaPredicted RBP5.97□□□□□ -1.45
CCDC7-204ENST00000375025 GABBR2O75899 941 aa5.93□□□□□ -1.46
CCDC7-204ENST00000375025 CLEC11AQ9Y240 323 aa5.92□□□□□ -1.46
CCDC7-204ENST00000375025 CLCN6P51797 869 aa5.9□□□□□ -1.47
CCDC7-204ENST00000375025 PABPN1Q86U42 306 aaKnown RBP eCLIP5.88□□□□□ -1.47
CCDC7-204ENST00000375025 PRR29P0C7W0 189 aa5.86□□□□□ -1.47
CCDC7-204ENST00000375025 CHADLQ6NUI6 762 aa5.86□□□□□ -1.47
CCDC7-204ENST00000375025 LHX8Q68G74 356 aa5.85□□□□□ -1.47
CCDC7-204ENST00000375025 POTEIP0CG38 1075 aa5.83□□□□□ -1.48
CCDC7-204ENST00000375025 FARP1Q9Y4F1 1045 aaPredicted RBP5.83□□□□□ -1.48
CCDC7-204ENST00000375025 CD44P16070 742 aaKnown RBP5.8□□□□□ -1.48
CCDC7-204ENST00000375025 ZNF579Q8NAF0 562 aaKnown RBP5.8□□□□□ -1.48
CCDC7-204ENST00000375025 CSRNP3Q8WYN3 585 aa5.79□□□□□ -1.48
CCDC7-204ENST00000375025 CREBZFQ9NS37 354 aa5.77□□□□□ -1.49
CCDC7-204ENST00000375025 STAG3Q9UJ98 1225 aa5.76□□□□□ -1.49
CCDC7-204ENST00000375025 MNX1P50219 401 aaPredicted RBP5.69□□□□□ -1.5
CCDC7-204ENST00000375025 ZRANB1Q9UGI0 708 aa5.68□□□□□ -1.5
CCDC7-204ENST00000375025 PROM2Q8N271 834 aa5.67□□□□□ -1.5
CCDC7-204ENST00000375025 DCBLD2Q96PD2 775 aa5.67□□□□□ -1.5
CCDC7-204ENST00000375025 SPDYE4A6NLX3 237 aa5.66□□□□□ -1.5
CCDC7-204ENST00000375025 GALR2O43603 387 aaPredicted RBP5.65□□□□□ -1.5
CCDC7-204ENST00000375025 OTUD5Q96G74 571 aa5.62□□□□□ -1.51
CCDC7-204ENST00000375025 NPM1P06748 294 aaKnown RBP eCLIP5.62□□□□□ -1.51
CCDC7-204ENST00000375025 POTEB2H3BUK9 544 aa5.61□□□□□ -1.51
CCDC7-204ENST00000375025 ASTLQ6HA08 431 aaPredicted RBP5.61□□□□□ -1.51
CCDC7-204ENST00000375025 PAK3O75914 559 aaPredicted RBP5.6□□□□□ -1.51
CCDC7-204ENST00000375025 PHF12Q96QT6 1004 aa5.6□□□□□ -1.51
CCDC7-204ENST00000375025 PCDH10Q9P2E7 1040 aa5.59□□□□□ -1.51
CCDC7-204ENST00000375025 PELP1Q8IZL8 1130 aaKnown RBP5.58□□□□□ -1.52
CCDC7-204ENST00000375025 ATMINO43313 823 aaPredicted RBP5.56□□□□□ -1.52
CCDC7-204ENST00000375025 SLC39A7Q92504 469 aa5.54□□□□□ -1.52
CCDC7-204ENST00000375025 MS4A3Q96HJ5 214 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms