RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 ZNF710Q8N1W2 664 aa12.91□□□□□ -0.34
LRIF1-201ENST00000369763 DBNDD2Q9BQY9 259 aa12.91□□□□□ -0.34
LRIF1-201ENST00000369763 CBX8Q9HC52 389 aa12.91□□□□□ -0.34
LRIF1-201ENST00000369763 NCOA5Q9HCD5 579 aaKnown RBP12.91□□□□□ -0.34
LRIF1-201ENST00000369763 ZHX1Q9UKY1 873 aaPredicted RBP12.91□□□□□ -0.34
LRIF1-201ENST00000369763 USP16Q9Y5T5 823 aa12.91□□□□□ -0.34
LRIF1-201ENST00000369763 RPS6KB1P23443 525 aa12.91□□□□□ -0.34
LRIF1-201ENST00000369763 CABLES1Q8TDN4 633 aa12.91□□□□□ -0.34
LRIF1-201ENST00000369763 DBNLQ9UJU6 430 aaKnown RBP12.91□□□□□ -0.34
LRIF1-201ENST00000369763 KIF3AQ9Y496 699 aa12.91□□□□□ -0.34
LRIF1-201ENST00000369763 DIP2AQ14689 1571 aa12.91□□□□□ -0.34
LRIF1-201ENST00000369763 RIOK3O14730 519 aaKnown RBP12.9□□□□□ -0.34
LRIF1-201ENST00000369763 TERF1P54274 439 aa12.9□□□□□ -0.34
LRIF1-201ENST00000369763 LEO1Q8WVC0 666 aaPredicted RBP12.9□□□□□ -0.34
LRIF1-201ENST00000369763 NAA30Q147X3 362 aaPredicted RBP12.9□□□□□ -0.34
LRIF1-201ENST00000369763 ARID5BQ14865 1188 aa12.9□□□□□ -0.34
LRIF1-201ENST00000369763 PPP4R3BQ5MIZ7 849 aa12.9□□□□□ -0.34
LRIF1-201ENST00000369763 FAM200AQ8TCP9 573 aa12.9□□□□□ -0.34
LRIF1-201ENST00000369763 PXDNQ92626 1479 aa12.9□□□□□ -0.35
LRIF1-201ENST00000369763 XRN1Q8IZH2 1706 aaKnown RBP12.9□□□□□ -0.35
LRIF1-201ENST00000369763 PIK3C2AO00443 1686 aa12.89□□□□□ -0.35
LRIF1-201ENST00000369763 ALDH1L1O75891 902 aa12.89□□□□□ -0.35
LRIF1-201ENST00000369763 BABAM1Q9NWV8 329 aa12.89□□□□□ -0.35
LRIF1-201ENST00000369763 TIMM10P62072 90 aa12.89□□□□□ -0.35
LRIF1-201ENST00000369763 CHRNA2Q15822 529 aa12.89□□□□□ -0.35
LRIF1-201ENST00000369763 HSP90AB3PQ58FF7 597 aa12.89□□□□□ -0.35
LRIF1-201ENST00000369763 ZNF496Q96IT1 587 aaPredicted RBP12.89□□□□□ -0.35
LRIF1-201ENST00000369763 PGBD1Q96JS3 809 aa12.89□□□□□ -0.35
LRIF1-201ENST00000369763 BCL2L12Q9HB09 334 aa12.89□□□□□ -0.35
LRIF1-201ENST00000369763 TAF5LO75529 589 aa12.89□□□□□ -0.35
LRIF1-201ENST00000369763 ZNF165P49910 485 aa12.89□□□□□ -0.35
LRIF1-201ENST00000369763 CHAF1AQ13111 956 aaPredicted RBP12.89□□□□□ -0.35
LRIF1-201ENST00000369763 KIAA1524Q8TCG1 905 aa12.89□□□□□ -0.35
LRIF1-201ENST00000369763 NEK1Q96PY6 1258 aa12.89□□□□□ -0.35
LRIF1-201ENST00000369763 NEURL1BA8MQ27 555 aa12.88□□□□□ -0.35
LRIF1-201ENST00000369763 GOLIM4O00461 696 aa12.88□□□□□ -0.35
LRIF1-201ENST00000369763 APOBRQ0VD83 1088 aa12.88□□□□□ -0.35
LRIF1-201ENST00000369763 OTUD7BQ6GQQ9 843 aa12.88□□□□□ -0.35
LRIF1-201ENST00000369763 TM6SF1Q9BZW5 370 aa12.88□□□□□ -0.35
LRIF1-201ENST00000369763 DDX21Q9NR30 783 aaKnown RBP eCLIP12.88□□□□□ -0.35
LRIF1-201ENST00000369763 NWD1Q149M9 1564 aa12.88□□□□□ -0.35
LRIF1-201ENST00000369763 A0A087WZG4 1122 aa12.88□□□□□ -0.35
LRIF1-201ENST00000369763 PDCP20941 246 aa12.88□□□□□ -0.35
LRIF1-201ENST00000369763 MTX1Q13505 466 aa12.88□□□□□ -0.35
LRIF1-201ENST00000369763 ZNF790Q6PG37 636 aa12.88□□□□□ -0.35
LRIF1-201ENST00000369763 FILIP1Q7Z7B0 1213 aa12.88□□□□□ -0.35
LRIF1-201ENST00000369763 IL17RAQ96F46 866 aa12.88□□□□□ -0.35
LRIF1-201ENST00000369763 CYP21A2P08686 494 aa12.87□□□□□ -0.35
LRIF1-201ENST00000369763 GCKRQ14397 625 aa12.87□□□□□ -0.35
LRIF1-201ENST00000369763 PDIA6Q15084 440 aa12.87□□□□□ -0.35
LRIF1-201ENST00000369763 RAPGEF4Q8WZA2 1011 aa12.87□□□□□ -0.35
LRIF1-201ENST00000369763 SYTL4Q96C24 671 aaPredicted RBP12.87□□□□□ -0.35
LRIF1-201ENST00000369763 SNRKQ9NRH2 765 aa12.87□□□□□ -0.35
LRIF1-201ENST00000369763 GOLGA6L6A8MZA4 724 aa12.87□□□□□ -0.35
LRIF1-201ENST00000369763 NPHP1O15259 732 aa12.87□□□□□ -0.35
LRIF1-201ENST00000369763 HOXB7P09629 217 aa12.87□□□□□ -0.35
LRIF1-201ENST00000369763 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.87□□□□□ -0.35
LRIF1-201ENST00000369763 V9GYY5 206 aaPredicted RBP12.87□□□□□ -0.35
LRIF1-201ENST00000369763 UBR1Q8IWV7 1749 aa12.87□□□□□ -0.35
LRIF1-201ENST00000369763 FAM208AQ9UK61 1670 aaKnown RBP12.87□□□□□ -0.35
LRIF1-201ENST00000369763 HAND2P61296 217 aa12.87□□□□□ -0.35
LRIF1-201ENST00000369763 ANKRD13DQ6ZTN6 518 aa12.87□□□□□ -0.35
LRIF1-201ENST00000369763 FMNL2Q96PY5 1086 aa12.87□□□□□ -0.35
LRIF1-201ENST00000369763 GPHNQ9NQX3 736 aaPredicted RBP12.87□□□□□ -0.35
LRIF1-201ENST00000369763 COL15A1P39059 1388 aa12.86□□□□□ -0.35
LRIF1-201ENST00000369763 AMOTQ4VCS5 1084 aa12.86□□□□□ -0.35
LRIF1-201ENST00000369763 ZNF594Q96JF6 807 aaPredicted RBP12.86□□□□□ -0.35
LRIF1-201ENST00000369763 TRMT1Q9NXH9 659 aaKnown RBP12.86□□□□□ -0.35
LRIF1-201ENST00000369763 USP42Q9H9J4 1324 aaKnown RBP12.86□□□□□ -0.35
LRIF1-201ENST00000369763 U2AF2P26368 475 aaKnown RBP eCLIP12.86□□□□□ -0.353e-8■■□□□ 13.6
LRIF1-201ENST00000369763 LMBR1LQ6UX01 489 aa12.86□□□□□ -0.35
LRIF1-201ENST00000369763 KCNH5Q8NCM2 988 aa12.86□□□□□ -0.35
LRIF1-201ENST00000369763 MAP7D2Q96T17 732 aa12.86□□□□□ -0.35
LRIF1-201ENST00000369763 SCAND2PQ9GZW5 306 aaPredicted RBP12.86□□□□□ -0.35
LRIF1-201ENST00000369763 EPB41L2O43491 1005 aaKnown RBP12.86□□□□□ -0.35
LRIF1-201ENST00000369763 SCRN1Q12765 414 aa12.86□□□□□ -0.35
LRIF1-201ENST00000369763 TNNI3KQ59H18 835 aa12.86□□□□□ -0.35
LRIF1-201ENST00000369763 CLIP2Q9UDT6 1046 aa12.86□□□□□ -0.35
LRIF1-201ENST00000369763 FPGT-TNNI3KV9GXZ4 949 aa12.86□□□□□ -0.35
LRIF1-201ENST00000369763 HIP1O00291 1037 aa12.85□□□□□ -0.35
LRIF1-201ENST00000369763 HMGN5P82970 282 aaKnown RBP12.85□□□□□ -0.35
LRIF1-201ENST00000369763 ATP2B3Q16720 1220 aa12.85□□□□□ -0.35
LRIF1-201ENST00000369763 TTLL5Q6EMB2 1281 aa12.85□□□□□ -0.35
LRIF1-201ENST00000369763 ISM2Q6H9L7 571 aa12.85□□□□□ -0.35
LRIF1-201ENST00000369763 TTC5Q8N0Z6 440 aa12.85□□□□□ -0.35
LRIF1-201ENST00000369763 PXDNLA1KZ92 1463 aa12.85□□□□□ -0.35
LRIF1-201ENST00000369763 ANKRD1Q15327 319 aa12.85□□□□□ -0.35
LRIF1-201ENST00000369763 ARHGEF25Q86VW2 580 aa12.85□□□□□ -0.35
LRIF1-201ENST00000369763 GJB4Q9NTQ9 266 aa12.85□□□□□ -0.35
LRIF1-201ENST00000369763 FMN2Q9NZ56 1722 aa12.85□□□□□ -0.35
LRIF1-201ENST00000369763 TRHP20396 242 aaPredicted RBP12.85□□□□□ -0.35
LRIF1-201ENST00000369763 ME1P48163 572 aa12.85□□□□□ -0.35
LRIF1-201ENST00000369763 PTPN12Q05209 780 aaKnown RBP12.85□□□□□ -0.35
LRIF1-201ENST00000369763 TPD52L1Q16890 204 aaPredicted RBP12.85□□□□□ -0.35
LRIF1-201ENST00000369763 CCDC144BQ3MJ40 725 aa12.85□□□□□ -0.35
LRIF1-201ENST00000369763 C11orf57Q6ZUT1 292 aaPredicted RBP12.85□□□□□ -0.35
LRIF1-201ENST00000369763 STOX1Q6ZVD7 989 aa12.85□□□□□ -0.35
LRIF1-201ENST00000369763 CCDC144CPQ8IYA2 1237 aa12.85□□□□□ -0.35
LRIF1-201ENST00000369763 PRIMPOLQ96LW4 560 aa12.85□□□□□ -0.35
LRIF1-201ENST00000369763 NALCNQ8IZF0 1738 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms