RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 PTPRCP08575 1304 aa23.37■■□□□ 1.33
CDC42BPB-201ENST00000361246 DYDC1Q8WWB3 177 aa23.37■■□□□ 1.33
CDC42BPB-201ENST00000361246 GJC1P36383 396 aa23.37■■□□□ 1.33
CDC42BPB-201ENST00000361246 NEK1Q96PY6 1258 aa23.37■■□□□ 1.33
CDC42BPB-201ENST00000361246 NYXQ9GZU5 481 aa23.37■■□□□ 1.33
CDC42BPB-201ENST00000361246 CCDC12Q8WUD4 166 aaPredicted RBP23.36■■□□□ 1.33
CDC42BPB-201ENST00000361246 GRPEL1Q9HAV7 217 aa23.36■■□□□ 1.33
CDC42BPB-201ENST00000361246 BACH2Q9BYV9 841 aa23.36■■□□□ 1.33
CDC42BPB-201ENST00000361246 RXRAP19793 462 aa23.36■■□□□ 1.33
CDC42BPB-201ENST00000361246 CWF19L2Q2TBE0 894 aaKnown RBP23.36■■□□□ 1.33
CDC42BPB-201ENST00000361246 ZKSCAN3Q9BRR0 538 aa23.36■■□□□ 1.33
CDC42BPB-201ENST00000361246 CASQ1P31415 396 aa23.36■■□□□ 1.33
CDC42BPB-201ENST00000361246 SLC9C2Q5TAH2 1124 aa23.36■■□□□ 1.33
CDC42BPB-201ENST00000361246 TPTE2Q6XPS3 522 aa23.36■■□□□ 1.33
CDC42BPB-201ENST00000361246 IRS4O14654 1257 aaPredicted RBP23.36■■□□□ 1.33
CDC42BPB-201ENST00000361246 KLF18A0A0U1RQI7 1052 aa23.35■■□□□ 1.33
CDC42BPB-201ENST00000361246 MRPS9P82933 396 aaKnown RBP23.35■■□□□ 1.33
CDC42BPB-201ENST00000361246 MCM9Q9NXL9 1143 aa23.35■■□□□ 1.33
CDC42BPB-201ENST00000361246 NKTRP30414 1462 aaKnown RBP23.35■■□□□ 1.33
CDC42BPB-201ENST00000361246 ZBTB9Q96C00 473 aa23.35■■□□□ 1.33
CDC42BPB-201ENST00000361246 PLIN2Q99541 437 aa23.35■■□□□ 1.33
CDC42BPB-201ENST00000361246 PHAXQ9H814 394 aaKnown RBP23.35■■□□□ 1.33
CDC42BPB-201ENST00000361246 STK32BQ9NY57 414 aa23.35■■□□□ 1.33
CDC42BPB-201ENST00000361246 TBCAO75347 108 aaKnown RBP23.35■■□□□ 1.33
CDC42BPB-201ENST00000361246 UBA7P41226 1012 aa23.35■■□□□ 1.33
CDC42BPB-201ENST00000361246 MEIS3Q99687 375 aa23.35■■□□□ 1.33
CDC42BPB-201ENST00000361246 TOP1P11387 765 aaKnown RBP23.35■■□□□ 1.33
CDC42BPB-201ENST00000361246 SMARCC1Q92922 1105 aaPredicted RBP23.35■■□□□ 1.33
CDC42BPB-201ENST00000361246 TCHPQ9BT92 498 aa23.35■■□□□ 1.33
CDC42BPB-201ENST00000361246 NAPAP54920 295 aa23.34■■□□□ 1.33
CDC42BPB-201ENST00000361246 CCNL1Q9UK58 526 aaPredicted RBP23.34■■□□□ 1.33
CDC42BPB-201ENST00000361246 LAMC3Q9Y6N6 1575 aa23.34■■□□□ 1.33
CDC42BPB-201ENST00000361246 CCDC174Q6PII3 467 aa23.34■■□□□ 1.33
CDC42BPB-201ENST00000361246 CUL7Q14999 1698 aa23.33■■□□□ 1.33
CDC42BPB-201ENST00000361246 TMEM110-MUSTN1A8MSY1 372 aa23.33■■□□□ 1.33
CDC42BPB-201ENST00000361246 UQCRFS1P1P0C7P4 283 aa23.33■■□□□ 1.33
CDC42BPB-201ENST00000361246 VPS36Q86VN1 386 aa23.33■■□□□ 1.33
CDC42BPB-201ENST00000361246 SSFA2P28290 1259 aa23.33■■□□□ 1.32
CDC42BPB-201ENST00000361246 APBA3O96018 575 aa23.32■■□□□ 1.32
CDC42BPB-201ENST00000361246 HMGN5P82970 282 aaKnown RBP23.32■■□□□ 1.32
CDC42BPB-201ENST00000361246 KRT24Q2M2I5 525 aa23.32■■□□□ 1.32
CDC42BPB-201ENST00000361246 LUZP1Q86V48 1076 aa23.32■■□□□ 1.32
CDC42BPB-201ENST00000361246 FNBP4Q8N3X1 1017 aaPredicted RBP23.32■■□□□ 1.32
CDC42BPB-201ENST00000361246 PROCA1Q8NCQ7 364 aaPredicted RBP23.32■■□□□ 1.32
CDC42BPB-201ENST00000361246 LIMCH1Q9UPQ0 1083 aa23.32■■□□□ 1.32
CDC42BPB-201ENST00000361246 FGFR1OPO95684 399 aaKnown RBP23.32■■□□□ 1.32
CDC42BPB-201ENST00000361246 C14orf93Q9H972 538 aaKnown RBP23.32■■□□□ 1.32
CDC42BPB-201ENST00000361246 KDM5BQ9UGL1 1544 aa23.31■■□□□ 1.32
CDC42BPB-201ENST00000361246 IQCEQ6IPM2 695 aa23.31■■□□□ 1.32
CDC42BPB-201ENST00000361246 RBM17Q96I25 401 aaKnown RBP23.31■■□□□ 1.32
CDC42BPB-201ENST00000361246 EXOC1Q9NV70 894 aa23.31■■□□□ 1.32
CDC42BPB-201ENST00000361246 HCLS1P14317 486 aaPredicted RBP23.31■■□□□ 1.32
CDC42BPB-201ENST00000361246 RIMS2Q9UQ26 1411 aa23.31■■□□□ 1.32
CDC42BPB-201ENST00000361246 ASXL2Q76L83 1435 aa23.3■■□□□ 1.32
CDC42BPB-201ENST00000361246 ARL1P40616 181 aaPredicted RBP23.3■■□□□ 1.32
CDC42BPB-201ENST00000361246 ZGPATQ8N5A5 531 aaKnown RBP23.3■■□□□ 1.32
CDC42BPB-201ENST00000361246 MTHFSDQ2M296 383 aaKnown RBP23.3■■□□□ 1.32
CDC42BPB-201ENST00000361246 ZNF526Q8TF50 670 aaPredicted RBP23.3■■□□□ 1.32
CDC42BPB-201ENST00000361246 ANO10Q9NW15 660 aa23.3■■□□□ 1.32
CDC42BPB-201ENST00000361246 EIF4A2Q14240 407 aaKnown RBP23.3■■□□□ 1.32
CDC42BPB-201ENST00000361246 MRVI1Q9Y6F6 885 aa23.3■■□□□ 1.32
CDC42BPB-201ENST00000361246 GOLGA6L10A0A0M3HER8 536 aa23.29■■□□□ 1.32
CDC42BPB-201ENST00000361246 KIAA0754O94854 1291 aa23.29■■□□□ 1.32
CDC42BPB-201ENST00000361246 UFL1O94874 794 aa23.29■■□□□ 1.32
CDC42BPB-201ENST00000361246 HMGXB3Q12766 1538 aa23.29■■□□□ 1.32
CDC42BPB-201ENST00000361246 GRM8O00222 908 aa23.29■■□□□ 1.32
CDC42BPB-201ENST00000361246 AMPD3Q01432 767 aa23.29■■□□□ 1.32
CDC42BPB-201ENST00000361246 CETN1Q12798 172 aa23.29■■□□□ 1.32
CDC42BPB-201ENST00000361246 THOC2Q8NI27 1593 aaKnown RBP23.29■■□□□ 1.32
CDC42BPB-201ENST00000361246 TBC1D9Q6ZT07 1266 aa23.29■■□□□ 1.32
CDC42BPB-201ENST00000361246 HARSP12081 509 aaKnown RBP23.29■■□□□ 1.32
CDC42BPB-201ENST00000361246 TAF12Q16514 161 aa23.29■■□□□ 1.32
CDC42BPB-201ENST00000361246 GPR162Q16538 588 aa23.29■■□□□ 1.32
CDC42BPB-201ENST00000361246 AKAP4Q5JQC9 854 aa23.29■■□□□ 1.32
CDC42BPB-201ENST00000361246 HOOK3Q86VS8 718 aa23.29■■□□□ 1.32
CDC42BPB-201ENST00000361246 CWC15Q9P013 229 aaKnown RBP23.29■■□□□ 1.32
CDC42BPB-201ENST00000361246 PRXQ9BXM0 1461 aa23.29■■□□□ 1.32
CDC42BPB-201ENST00000361246 ARID5AQ03989 594 aa23.29■■□□□ 1.32
CDC42BPB-201ENST00000361246 KIF4BQ2VIQ3 1234 aa23.29■■□□□ 1.32
CDC42BPB-201ENST00000361246 SERPINA10Q9UK55 444 aa23.29■■□□□ 1.32
CDC42BPB-201ENST00000361246 IFFO1Q0D2I5 559 aa23.28■■□□□ 1.32
CDC42BPB-201ENST00000361246 RTN1Q16799 776 aa23.28■■□□□ 1.32
CDC42BPB-201ENST00000361246 OTUD6BQ8N6M0 293 aa23.28■■□□□ 1.32
CDC42BPB-201ENST00000361246 MCM5P33992 734 aa23.28■■□□□ 1.32
CDC42BPB-201ENST00000361246 EP400NLQ6ZTU2 488 aa23.28■■□□□ 1.32
CDC42BPB-201ENST00000361246 GINS2Q9Y248 185 aa23.28■■□□□ 1.32
CDC42BPB-201ENST00000361246 ERICH4A6NGS2 130 aa23.28■■□□□ 1.32
CDC42BPB-201ENST00000361246 MARCKSP29966 332 aaPredicted RBP23.28■■□□□ 1.32
CDC42BPB-201ENST00000361246 STAT6P42226 847 aa23.28■■□□□ 1.32
CDC42BPB-201ENST00000361246 GPCPD1Q9NPB8 672 aa23.28■■□□□ 1.32
CDC42BPB-201ENST00000361246 RBM27Q9P2N5 1060 aaKnown RBP23.28■■□□□ 1.32
CDC42BPB-201ENST00000361246 TCP10Q12799 353 aa23.28■■□□□ 1.32
CDC42BPB-201ENST00000361246 C8orf58Q8NAV2 365 aa23.28■■□□□ 1.32
CDC42BPB-201ENST00000361246 LDHBP07195 334 aaKnown RBP23.27■■□□□ 1.32
CDC42BPB-201ENST00000361246 TMC6Q7Z403 805 aa23.27■■□□□ 1.32
CDC42BPB-201ENST00000361246 ZBTB43O43298 467 aa23.27■■□□□ 1.32
CDC42BPB-201ENST00000361246 BRF1Q92994 677 aa23.27■■□□□ 1.32
CDC42BPB-201ENST00000361246 MAP2K1Q02750 393 aaPredicted RBP23.27■■□□□ 1.32
CDC42BPB-201ENST00000361246 ALG1Q9BT22 464 aa23.27■■□□□ 1.32
CDC42BPB-201ENST00000361246 CLIP2Q9UDT6 1046 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms