RNA–Protein interactions for RNA: ENST00000349607.8

MUC4-204, Transcript of mucin 4, cell surface associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MUC4, Length 3,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-204ENST00000349607 ANO6Q4KMQ2 910 aa13.2□□□□□ -0.3
MUC4-204ENST00000349607 CDC37L1Q7L3B6 337 aa13.2□□□□□ -0.3
MUC4-204ENST00000349607 DDX17Q92841 729 aaKnown RBP13.2□□□□□ -0.3
MUC4-204ENST00000349607 TLR7Q9NYK1 1049 aaKnown RBP13.2□□□□□ -0.3
MUC4-204ENST00000349607 ZC3H13Q5T200 1668 aaKnown RBP13.2□□□□□ -0.3
MUC4-204ENST00000349607 SLC27A2O14975 620 aa13.19□□□□□ -0.3
MUC4-204ENST00000349607 CCDC57Q2TAC2 916 aa13.19□□□□□ -0.3
MUC4-204ENST00000349607 HOMER1Q86YM7 354 aa13.19□□□□□ -0.3
MUC4-204ENST00000349607 PRIMPOLQ96LW4 560 aa13.19□□□□□ -0.3
MUC4-204ENST00000349607 TIGD1Q96MW7 591 aa13.19□□□□□ -0.3
MUC4-204ENST00000349607 CFAP45Q9UL16 551 aa13.19□□□□□ -0.3
MUC4-204ENST00000349607 CCDC186Q7Z3E2 898 aa13.19□□□□□ -0.3
MUC4-204ENST00000349607 PRDM11Q9NQV5 511 aa13.19□□□□□ -0.3
MUC4-204ENST00000349607 SHPRHQ149N8 1683 aa13.19□□□□□ -0.3
MUC4-204ENST00000349607 A0A0D9SFI3 127 aa13.19□□□□□ -0.3
MUC4-204ENST00000349607 DNAJC25Q9H1X3 360 aa13.19□□□□□ -0.3
MUC4-204ENST00000349607 DDX21Q9NR30 783 aaKnown RBP eCLIP13.19□□□□□ -0.3
MUC4-204ENST00000349607 GIGYF1O75420 1035 aaPredicted RBP13.18□□□□□ -0.3
MUC4-204ENST00000349607 POLR3DP05423 398 aaPredicted RBP13.18□□□□□ -0.3
MUC4-204ENST00000349607 TIMM10P62072 90 aa13.18□□□□□ -0.3
MUC4-204ENST00000349607 UVSSAQ2YD98 709 aa13.18□□□□□ -0.3
MUC4-204ENST00000349607 HSP90AB3PQ58FF7 597 aa13.18□□□□□ -0.3
MUC4-204ENST00000349607 RRP12Q5JTH9 1297 aaKnown RBP13.18□□□□□ -0.3
MUC4-204ENST00000349607 CCDC158Q5M9N0 1113 aa13.18□□□□□ -0.3
MUC4-204ENST00000349607 CPLX2Q6PUV4 134 aaKnown RBP13.18□□□□□ -0.3
MUC4-204ENST00000349607 PI4K2BQ8TCG2 481 aa13.18□□□□□ -0.3
MUC4-204ENST00000349607 DIP2CQ9Y2E4 1556 aa13.18□□□□□ -0.3
MUC4-204ENST00000349607 JAK2O60674 1132 aa13.18□□□□□ -0.3
MUC4-204ENST00000349607 CYP2E1P05181 493 aaPredicted RBP13.18□□□□□ -0.3
MUC4-204ENST00000349607 TNNT3P45378 269 aaPredicted RBP13.18□□□□□ -0.3
MUC4-204ENST00000349607 LRRFIP1Q32MZ4 808 aaKnown RBP13.18□□□□□ -0.3
MUC4-204ENST00000349607 ISM2Q6H9L7 571 aa13.18□□□□□ -0.3
MUC4-204ENST00000349607 DBNDD2Q9BQY9 259 aa13.18□□□□□ -0.3
MUC4-204ENST00000349607 BIN1O00499 593 aa13.18□□□□□ -0.3
MUC4-204ENST00000349607 SEC62Q99442 399 aaKnown RBP13.18□□□□□ -0.3
MUC4-204ENST00000349607 TRMT1Q9NXH9 659 aaKnown RBP13.18□□□□□ -0.3
MUC4-204ENST00000349607 TPCN1Q9ULQ1 816 aa13.18□□□□□ -0.3
MUC4-204ENST00000349607 TPM3P06753 285 aa13.17□□□□□ -0.3
MUC4-204ENST00000349607 TYRO3Q06418 890 aa13.17□□□□□ -0.3
MUC4-204ENST00000349607 ZNF396Q96N95 335 aaPredicted RBP13.17□□□□□ -0.3
MUC4-204ENST00000349607 PPLO60437 1756 aa13.17□□□□□ -0.3
MUC4-204ENST00000349607 SNRPA1P09661 255 aaKnown RBP13.17□□□□□ -0.3
MUC4-204ENST00000349607 PTGS1P23219 599 aa13.17□□□□□ -0.3
MUC4-204ENST00000349607 CLIP2Q9UDT6 1046 aa13.17□□□□□ -0.3
MUC4-204ENST00000349607 AOX1Q06278 1338 aa13.17□□□□□ -0.3
MUC4-204ENST00000349607 TRIM29Q14134 588 aa13.17□□□□□ -0.3
MUC4-204ENST00000349607 ZNF790Q6PG37 636 aa13.17□□□□□ -0.3
MUC4-204ENST00000349607 IFNL2Q8IZJ0 200 aa13.17□□□□□ -0.3
MUC4-204ENST00000349607 MTMR6Q9Y217 621 aa13.17□□□□□ -0.3
MUC4-204ENST00000349607 U3KPZ7 1027 aaPredicted RBP13.17□□□□□ -0.3
MUC4-204ENST00000349607 APOBRQ0VD83 1088 aa13.16□□□□□ -0.3
MUC4-204ENST00000349607 ZNF496Q96IT1 587 aaPredicted RBP13.16□□□□□ -0.3
MUC4-204ENST00000349607 CNNM1Q9NRU3 951 aa13.16□□□□□ -0.3
MUC4-204ENST00000349607 IDH1O75874 414 aaKnown RBP13.16□□□□□ -0.3
MUC4-204ENST00000349607 CCAR2Q8N163 923 aaKnown RBP13.16□□□□□ -0.3
MUC4-204ENST00000349607 TRIM34Q9BYJ4 488 aa13.16□□□□□ -0.3
MUC4-204ENST00000349607 USP16Q9Y5T5 823 aa13.16□□□□□ -0.3
MUC4-204ENST00000349607 CRB1P82279 1406 aa13.16□□□□□ -0.3
MUC4-204ENST00000349607 NCOA3Q9Y6Q9 1424 aa13.16□□□□□ -0.3
MUC4-204ENST00000349607 LIG1P18858 919 aa13.16□□□□□ -0.3
MUC4-204ENST00000349607 SLC20A2Q08357 652 aa13.16□□□□□ -0.3
MUC4-204ENST00000349607 FAM200AQ8TCP9 573 aa13.16□□□□□ -0.3
MUC4-204ENST00000349607 TSPYL1Q9H0U9 437 aa13.16□□□□□ -0.3
MUC4-204ENST00000349607 CCAR1Q8IX12 1150 aaKnown RBP13.15□□□□□ -0.3
MUC4-204ENST00000349607 CCDC82Q8N4S0 544 aa13.15□□□□□ -0.3
MUC4-204ENST00000349607 FSIP1Q8NA03 581 aa13.15□□□□□ -0.3
MUC4-204ENST00000349607 NCOA5Q9HCD5 579 aaKnown RBP13.15□□□□□ -0.3
MUC4-204ENST00000349607 RGS12O14924 1447 aa13.15□□□□□ -0.3
MUC4-204ENST00000349607 SETD1BQ9UPS6 1966 aaKnown RBP13.15□□□□□ -0.3
MUC4-204ENST00000349607 GPTP24298 496 aa13.15□□□□□ -0.3
MUC4-204ENST00000349607 CLEC17AQ6ZS10 378 aa13.15□□□□□ -0.3
MUC4-204ENST00000349607 DDX19AQ9NUU7 478 aaKnown RBP13.15□□□□□ -0.3
MUC4-204ENST00000349607 BABAM1Q9NWV8 329 aa13.15□□□□□ -0.3
MUC4-204ENST00000349607 ERCC4Q92889 916 aaPredicted RBP13.15□□□□□ -0.3
MUC4-204ENST00000349607 MCMDC2Q4G0Z9 681 aa13.14□□□□□ -0.31
MUC4-204ENST00000349607 TTC6Q86TZ1 520 aa13.14□□□□□ -0.31
MUC4-204ENST00000349607 CCDC112Q8NEF3 446 aa13.14□□□□□ -0.31
MUC4-204ENST00000349607 CLGNO14967 610 aa13.14□□□□□ -0.31
MUC4-204ENST00000349607 RPS6KB1P23443 525 aa13.14□□□□□ -0.31
MUC4-204ENST00000349607 CCDC144CPQ8IYA2 1237 aa13.14□□□□□ -0.31
MUC4-204ENST00000349607 NAT10Q9H0A0 1025 aaKnown RBP13.14□□□□□ -0.31
MUC4-204ENST00000349607 ARHGEF28Q8N1W1 1705 aaKnown RBP13.14□□□□□ -0.31
MUC4-204ENST00000349607 ADGRB2O60241 1585 aa13.14□□□□□ -0.31
MUC4-204ENST00000349607 FAM177A1Q8N128 213 aaPredicted RBP13.14□□□□□ -0.31
MUC4-204ENST00000349607 ZNF594Q96JF6 807 aaPredicted RBP13.14□□□□□ -0.31
MUC4-204ENST00000349607 BCCIPQ9P287 314 aaKnown RBP eCLIP13.14□□□□□ -0.31
MUC4-204ENST00000349607 HOXB7P09629 217 aa13.13□□□□□ -0.31
MUC4-204ENST00000349607 TNNT1P13805 278 aa13.13□□□□□ -0.31
MUC4-204ENST00000349607 ZNF710Q8N1W2 664 aa13.13□□□□□ -0.31
MUC4-204ENST00000349607 HMG20BQ9P0W2 317 aa13.13□□□□□ -0.31
MUC4-204ENST00000349607 GABPB1Q06547 395 aaPredicted RBP13.13□□□□□ -0.31
MUC4-204ENST00000349607 POLA2Q14181 598 aa13.13□□□□□ -0.31
MUC4-204ENST00000349607 GCKRQ14397 625 aa13.13□□□□□ -0.31
MUC4-204ENST00000349607 ZNF589Q86UQ0 364 aaPredicted RBP13.13□□□□□ -0.31
MUC4-204ENST00000349607 CEP57L1Q8IYX8 460 aa13.13□□□□□ -0.31
MUC4-204ENST00000349607 PDILTQ8N807 584 aa13.13□□□□□ -0.31
MUC4-204ENST00000349607 CHMP4CQ96CF2 233 aa13.13□□□□□ -0.31
MUC4-204ENST00000349607 CALCOCO1Q9P1Z2 691 aa13.13□□□□□ -0.31
MUC4-204ENST00000349607 AK9Q5TCS8 1911 aa13.13□□□□□ -0.31
MUC4-204ENST00000349607 OTUD7BQ6GQQ9 843 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms