RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 CLSTN2Q9H4D0 955 aa11.07□□□□□ -0.64
TRERF1-201ENST00000340840 PYCARDQ9ULZ3 195 aa11.07□□□□□ -0.64
TRERF1-201ENST00000340840 TBX22Q9Y458 520 aa11.07□□□□□ -0.64
TRERF1-201ENST00000340840 CPLX1O14810 134 aa11.07□□□□□ -0.64
TRERF1-201ENST00000340840 HMGB1P09429 215 aaKnown RBP11.07□□□□□ -0.64
TRERF1-201ENST00000340840 RPS6KB1P23443 525 aa11.07□□□□□ -0.64
TRERF1-201ENST00000340840 AKAP4Q5JQC9 854 aa11.07□□□□□ -0.64
TRERF1-201ENST00000340840 BRF1Q92994 677 aa11.07□□□□□ -0.64
TRERF1-201ENST00000340840 FAM227BQ96M60 508 aa11.07□□□□□ -0.64
TRERF1-201ENST00000340840 NEUROD6Q96NK8 337 aa11.07□□□□□ -0.64
TRERF1-201ENST00000340840 ELP1O95163 1332 aa11.07□□□□□ -0.64
TRERF1-201ENST00000340840 LIG1P18858 919 aa11.07□□□□□ -0.64
TRERF1-201ENST00000340840 LEO1Q8WVC0 666 aaPredicted RBP11.07□□□□□ -0.64
TRERF1-201ENST00000340840 RAPGEF4Q8WZA2 1011 aa11.07□□□□□ -0.64
TRERF1-201ENST00000340840 FEZ1Q99689 392 aa11.07□□□□□ -0.64
TRERF1-201ENST00000340840 TPCN1Q9ULQ1 816 aa11.07□□□□□ -0.64
TRERF1-201ENST00000340840 STK38Q15208 465 aa11.06□□□□□ -0.64
TRERF1-201ENST00000340840 SYNE3Q6ZMZ3 975 aa11.06□□□□□ -0.64
TRERF1-201ENST00000340840 BCL11BQ9C0K0 894 aaPredicted RBP11.06□□□□□ -0.64
TRERF1-201ENST00000340840 SMC2O95347 1197 aa11.06□□□□□ -0.64
TRERF1-201ENST00000340840 ZNF75DP51815 510 aa11.06□□□□□ -0.64
TRERF1-201ENST00000340840 CWF19L2Q2TBE0 894 aaKnown RBP11.06□□□□□ -0.64
TRERF1-201ENST00000340840 ZNF330Q9Y3S2 320 aaPredicted RBP11.06□□□□□ -0.64
TRERF1-201ENST00000340840 CDK11BP21127 795 aaKnown RBP11.06□□□□□ -0.64
TRERF1-201ENST00000340840 CEP135Q66GS9 1140 aa11.06□□□□□ -0.64
TRERF1-201ENST00000340840 KRT28Q7Z3Y7 464 aa11.06□□□□□ -0.64
TRERF1-201ENST00000340840 KIF18AQ8NI77 898 aa11.06□□□□□ -0.64
TRERF1-201ENST00000340840 KDRP35968 1356 aa11.06□□□□□ -0.64
TRERF1-201ENST00000340840 IL25Q9H293 177 aa11.06□□□□□ -0.64
TRERF1-201ENST00000340840 MYL6BP14649 208 aa11.05□□□□□ -0.64
TRERF1-201ENST00000340840 CCAR1Q8IX12 1150 aaKnown RBP11.05□□□□□ -0.64
TRERF1-201ENST00000340840 MAP4K1Q92918 833 aa11.05□□□□□ -0.64
TRERF1-201ENST00000340840 GSDMDP57764 484 aa11.05□□□□□ -0.64
TRERF1-201ENST00000340840 CPLX2Q6PUV4 134 aaKnown RBP11.05□□□□□ -0.64
TRERF1-201ENST00000340840 TOM1L2Q6ZVM7 507 aa11.05□□□□□ -0.64
TRERF1-201ENST00000340840 LRRC59Q96AG4 307 aaKnown RBP11.05□□□□□ -0.64
TRERF1-201ENST00000340840 LGR6Q9HBX8 967 aa11.05□□□□□ -0.64
TRERF1-201ENST00000340840 MYO5BQ9ULV0 1848 aa11.04□□□□□ -0.64
TRERF1-201ENST00000340840 DHX16O60231 1041 aaKnown RBP11.04□□□□□ -0.64
TRERF1-201ENST00000340840 FSIP1Q8NA03 581 aa11.04□□□□□ -0.64
TRERF1-201ENST00000340840 IP6K1Q92551 441 aa11.04□□□□□ -0.64
TRERF1-201ENST00000340840 IL17RAQ96F46 866 aa11.04□□□□□ -0.64
TRERF1-201ENST00000340840 MRVI1Q9Y6F6 885 aa11.04□□□□□ -0.64
TRERF1-201ENST00000340840 GTF2F1P35269 517 aaKnown RBP eCLIP11.04□□□□□ -0.64
TRERF1-201ENST00000340840 NECTIN1Q15223 517 aa11.04□□□□□ -0.64
TRERF1-201ENST00000340840 FMNL2Q96PY5 1086 aa11.04□□□□□ -0.64
TRERF1-201ENST00000340840 ARGLU1Q9NWB6 273 aaPredicted RBP11.04□□□□□ -0.64
TRERF1-201ENST00000340840 PXDNLA1KZ92 1463 aa11.04□□□□□ -0.64
TRERF1-201ENST00000340840 CCP110O43303 1012 aa11.04□□□□□ -0.64
TRERF1-201ENST00000340840 SKILP12757 684 aa11.04□□□□□ -0.64
TRERF1-201ENST00000340840 Q6ZUG5 572 aa11.04□□□□□ -0.64
TRERF1-201ENST00000340840 TECPR2O15040 1411 aa11.04□□□□□ -0.64
TRERF1-201ENST00000340840 MYD88Q99836 296 aa11.03□□□□□ -0.64
TRERF1-201ENST00000340840 BICC1Q9H694 974 aaKnown RBP11.03□□□□□ -0.64
TRERF1-201ENST00000340840 CCDC66A2RUB6 948 aa11.03□□□□□ -0.64
TRERF1-201ENST00000340840 RALYLQ86SE5 291 aaKnown RBP11.03□□□□□ -0.64
TRERF1-201ENST00000340840 MNS1Q8NEH6 495 aa11.03□□□□□ -0.64
TRERF1-201ENST00000340840 TMEM94Q12767 1356 aa11.03□□□□□ -0.64
TRERF1-201ENST00000340840 TAF7LQ5H9L4 462 aa11.03□□□□□ -0.64
TRERF1-201ENST00000340840 ZSCAN25Q6NSZ9 544 aa11.03□□□□□ -0.64
TRERF1-201ENST00000340840 OGFRQ9NZT2 677 aa11.03□□□□□ -0.64
TRERF1-201ENST00000340840 NPHP4O75161 1426 aaPredicted RBP11.03□□□□□ -0.64
TRERF1-201ENST00000340840 U2AF2P26368 475 aaKnown RBP eCLIP11.02□□□□□ -0.64
TRERF1-201ENST00000340840 MTX1Q13505 466 aa11.02□□□□□ -0.64
TRERF1-201ENST00000340840 DDX17Q92841 729 aaKnown RBP11.02□□□□□ -0.64
TRERF1-201ENST00000340840 EAF2Q96CJ1 260 aaPredicted RBP11.02□□□□□ -0.64
TRERF1-201ENST00000340840 TRMT1Q9NXH9 659 aaKnown RBP11.02□□□□□ -0.64
TRERF1-201ENST00000340840 KNDC1Q76NI1 1749 aa11.02□□□□□ -0.64
TRERF1-201ENST00000340840 A0A0D9SFI3 127 aa11.02□□□□□ -0.65
TRERF1-201ENST00000340840 KIF20AO95235 890 aa11.02□□□□□ -0.65
TRERF1-201ENST00000340840 SFPQP23246 707 aaKnown RBP eCLIP11.02□□□□□ -0.65
TRERF1-201ENST00000340840 LRMPQ12912 555 aa11.02□□□□□ -0.65
TRERF1-201ENST00000340840 UTP14CQ5TAP6 766 aaKnown RBP11.02□□□□□ -0.65
TRERF1-201ENST00000340840 TDRD7Q8NHU6 1098 aaKnown RBP11.02□□□□□ -0.65
TRERF1-201ENST00000340840 DDX21Q9NR30 783 aaKnown RBP eCLIP11.02□□□□□ -0.65
TRERF1-201ENST00000340840 USP42Q9H9J4 1324 aaKnown RBP11.02□□□□□ -0.65
TRERF1-201ENST00000340840 PLEKHG1Q9ULL1 1385 aa11.02□□□□□ -0.65
TRERF1-201ENST00000340840 DCAF8L1A6NGE4 600 aa11.02□□□□□ -0.65
TRERF1-201ENST00000340840 MCMDC2Q4G0Z9 681 aa11.02□□□□□ -0.65
TRERF1-201ENST00000340840 SUCLG2Q96I99 432 aa11.02□□□□□ -0.65
TRERF1-201ENST00000340840 DMTNQ08495 405 aa11.02□□□□□ -0.65
TRERF1-201ENST00000340840 TRDNQ13061 729 aa11.02□□□□□ -0.65
TRERF1-201ENST00000340840 TAF3Q5VWG9 929 aa11.02□□□□□ -0.65
TRERF1-201ENST00000340840 ITSN1Q15811 1721 aa11.01□□□□□ -0.65
TRERF1-201ENST00000340840 RNMTO43148 476 aaKnown RBP11.01□□□□□ -0.65
TRERF1-201ENST00000340840 KCNQ3O43525 872 aa11.01□□□□□ -0.65
TRERF1-201ENST00000340840 CCT2P78371 535 aaKnown RBP11.01□□□□□ -0.65
TRERF1-201ENST00000340840 WASHC4Q2M389 1173 aa11.01□□□□□ -0.65
TRERF1-201ENST00000340840 ATL3Q6DD88 541 aa11.01□□□□□ -0.65
TRERF1-201ENST00000340840 LRRC2Q9BYS8 371 aa11.01□□□□□ -0.65
TRERF1-201ENST00000340840 NR1I2O75469 434 aa11.01□□□□□ -0.65
TRERF1-201ENST00000340840 GUCY1B3Q02153 619 aa11.01□□□□□ -0.65
TRERF1-201ENST00000340840 CABLES1Q8TDN4 633 aa11.01□□□□□ -0.65
TRERF1-201ENST00000340840 GTF3C6Q969F1 213 aa11.01□□□□□ -0.65
TRERF1-201ENST00000340840 CCDC34Q96HJ3 373 aa11.01□□□□□ -0.65
TRERF1-201ENST00000340840 CCDC69A6NI79 296 aa11.01□□□□□ -0.65
TRERF1-201ENST00000340840 JAK2O60674 1132 aa11.01□□□□□ -0.65
TRERF1-201ENST00000340840 LLPHQ9BRT6 129 aaKnown RBP11.01□□□□□ -0.65
TRERF1-201ENST00000340840 CTNNA3Q9UI47 895 aa11.01□□□□□ -0.65
TRERF1-201ENST00000340840 DLG5Q8TDM6 1919 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms