RNA–Protein interactions for RNA: ENST00000331471.8

BEST3-203, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,506 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-203ENST00000331471 GIGYF2Q6Y7W6 1299 aaKnown RBP11.55□□□□□ -0.56
BEST3-203ENST00000331471 ZNF34Q8IZ26 560 aa11.55□□□□□ -0.56
BEST3-203ENST00000331471 PSMD1Q99460 953 aa11.55□□□□□ -0.56
BEST3-203ENST00000331471 TMX4Q9H1E5 349 aaPredicted RBP11.55□□□□□ -0.56
BEST3-203ENST00000331471 MKRN1Q9UHC7 482 aaKnown RBP11.55□□□□□ -0.56
BEST3-203ENST00000331471 PPEF1O14829 653 aaPredicted RBP11.54□□□□□ -0.56
BEST3-203ENST00000331471 EPHX2P34913 555 aa11.54□□□□□ -0.56
BEST3-203ENST00000331471 TMPOP42166 694 aaKnown RBP11.54□□□□□ -0.56
BEST3-203ENST00000331471 EIF6P56537 245 aaKnown RBP11.54□□□□□ -0.56
BEST3-203ENST00000331471 NEUROD2Q15784 382 aa11.54□□□□□ -0.56
BEST3-203ENST00000331471 NECTIN2Q92692 538 aa11.54□□□□□ -0.56
BEST3-203ENST00000331471 NLRP3Q96P20 1036 aa11.54□□□□□ -0.56
BEST3-203ENST00000331471 BABAM1Q9NWV8 329 aa11.54□□□□□ -0.56
BEST3-203ENST00000331471 SUPT16HQ9Y5B9 1047 aaKnown RBP11.54□□□□□ -0.56
BEST3-203ENST00000331471 GJA3Q9Y6H8 435 aa11.54□□□□□ -0.56
BEST3-203ENST00000331471 RNF123Q5XPI4 1314 aa11.54□□□□□ -0.56
BEST3-203ENST00000331471 FZD9O00144 591 aa11.53□□□□□ -0.56
BEST3-203ENST00000331471 ANXA1P04083 346 aa11.53□□□□□ -0.56
BEST3-203ENST00000331471 HOXA10P31260 410 aaPredicted RBP11.53□□□□□ -0.56
BEST3-203ENST00000331471 GRIPAP1Q4V328 841 aa11.53□□□□□ -0.56
BEST3-203ENST00000331471 CCDC146Q8IYE0 955 aa11.53□□□□□ -0.56
BEST3-203ENST00000331471 GPC2Q8N158 579 aa11.53□□□□□ -0.56
BEST3-203ENST00000331471 PHF12Q96QT6 1004 aa11.53□□□□□ -0.56
BEST3-203ENST00000331471 CRAMP1Q96RY5 1269 aa11.53□□□□□ -0.56
BEST3-203ENST00000331471 UTP14AQ9BVJ6 771 aaKnown RBP11.53□□□□□ -0.56
BEST3-203ENST00000331471 LAS1LQ9Y4W2 734 aaKnown RBP11.53□□□□□ -0.56
BEST3-203ENST00000331471 MYBBP1AQ9BQG0 1328 aaKnown RBP11.53□□□□□ -0.56
BEST3-203ENST00000331471 LMOD1P29536 600 aaPredicted RBP11.52□□□□□ -0.57
BEST3-203ENST00000331471 AIMP1Q12904 312 aaKnown RBP11.52□□□□□ -0.57
BEST3-203ENST00000331471 WDR43Q15061 677 aaKnown RBP eCLIP11.52□□□□□ -0.57
BEST3-203ENST00000331471 PDIA6Q15084 440 aa11.52□□□□□ -0.57
BEST3-203ENST00000331471 PROSER3Q2NL68 480 aa11.52□□□□□ -0.57
BEST3-203ENST00000331471 HSP90AB3PQ58FF7 597 aa11.52□□□□□ -0.57
BEST3-203ENST00000331471 PNMA8AQ86V59 439 aaPredicted RBP11.52□□□□□ -0.57
BEST3-203ENST00000331471 TNS4Q8IZW8 715 aa11.52□□□□□ -0.57
BEST3-203ENST00000331471 LARGE2Q8N3Y3 721 aa11.52□□□□□ -0.57
BEST3-203ENST00000331471 SNED1Q8TER0 1413 aa11.52□□□□□ -0.57
BEST3-203ENST00000331471 C3orf67Q6ZVT6 689 aa11.51□□□□□ -0.57
BEST3-203ENST00000331471 LRP10Q7Z4F1 713 aa11.51□□□□□ -0.57
BEST3-203ENST00000331471 PASKQ96RG2 1323 aa11.51□□□□□ -0.57
BEST3-203ENST00000331471 ANKRD36CQ5JPF3 1778 aa11.51□□□□□ -0.57
BEST3-203ENST00000331471 CNTNAP1P78357 1384 aa11.5□□□□□ -0.57
BEST3-203ENST00000331471 TMEM88BA6NKF7 163 aa11.5□□□□□ -0.57
BEST3-203ENST00000331471 COPS6Q7L5N1 327 aa11.5□□□□□ -0.57
BEST3-203ENST00000331471 NIM1KQ8IY84 436 aa11.5□□□□□ -0.57
BEST3-203ENST00000331471 XAGE3Q8WTP9 111 aa11.5□□□□□ -0.57
BEST3-203ENST00000331471 RUNDC1Q96C34 613 aa11.5□□□□□ -0.57
BEST3-203ENST00000331471 PCNTO95613 3336 aa11.5□□□□□ -0.57
BEST3-203ENST00000331471 ABCC4O15439 1325 aa11.5□□□□□ -0.57
BEST3-203ENST00000331471 PPIP5K2O43314 1243 aa11.5□□□□□ -0.57
BEST3-203ENST00000331471 SLC51AQ86UW1 340 aa11.5□□□□□ -0.57
BEST3-203ENST00000331471 RYDENQ9NUL5 291 aaKnown RBP11.5□□□□□ -0.57
BEST3-203ENST00000331471 ADAMTSL1Q8N6G6 1762 aa11.49□□□□□ -0.57
BEST3-203ENST00000331471 COL4A5P29400 1685 aa11.49□□□□□ -0.57
BEST3-203ENST00000331471 ITGBL1O95965 494 aaPredicted RBP11.49□□□□□ -0.57
BEST3-203ENST00000331471 SLC10A5Q5PT55 438 aa11.49□□□□□ -0.57
BEST3-203ENST00000331471 MAP1SQ66K74 1059 aaPredicted RBP11.49□□□□□ -0.57
BEST3-203ENST00000331471 NLRP10Q86W26 655 aa11.49□□□□□ -0.57
BEST3-203ENST00000331471 CNTROBQ8N137 903 aa11.49□□□□□ -0.57
BEST3-203ENST00000331471 SUPT20HQ8NEM7 779 aa11.49□□□□□ -0.57
BEST3-203ENST00000331471 DDX21Q9NR30 783 aaKnown RBP eCLIP11.49□□□□□ -0.57
BEST3-203ENST00000331471 ATP6V0A2Q9Y487 856 aa11.49□□□□□ -0.57
BEST3-203ENST00000331471 HCLS1P14317 486 aaPredicted RBP11.48□□□□□ -0.57
BEST3-203ENST00000331471 AOC3Q16853 763 aa11.48□□□□□ -0.57
BEST3-203ENST00000331471 KRT24Q2M2I5 525 aa11.48□□□□□ -0.57
BEST3-203ENST00000331471 DDX46Q7L014 1031 aaKnown RBP11.48□□□□□ -0.57
BEST3-203ENST00000331471 AIDAQ96BJ3 306 aa11.48□□□□□ -0.57
BEST3-203ENST00000331471 MFRPQ9BY79 579 aa11.48□□□□□ -0.57
BEST3-203ENST00000331471 CHPF2Q9P2E5 772 aa11.48□□□□□ -0.57
BEST3-203ENST00000331471 TRMT112Q9UI30 125 aaKnown RBP11.48□□□□□ -0.57
BEST3-203ENST00000331471 SH3TC1Q8TE82 1336 aa11.47□□□□□ -0.57
BEST3-203ENST00000331471 CHL1O00533 1208 aa11.47□□□□□ -0.57
BEST3-203ENST00000331471 PRKCSHP14314 528 aaPredicted RBP11.47□□□□□ -0.57
BEST3-203ENST00000331471 TCIRG1Q13488 830 aa11.47□□□□□ -0.57
BEST3-203ENST00000331471 HDGFL1Q5TGJ6 251 aa11.47□□□□□ -0.57
BEST3-203ENST00000331471 DPP8Q6V1X1 898 aaPredicted RBP11.47□□□□□ -0.57
BEST3-203ENST00000331471 TRIM35Q9UPQ4 493 aa11.47□□□□□ -0.57
BEST3-203ENST00000331471 LAMB2P55268 1798 aa11.47□□□□□ -0.57
BEST3-203ENST00000331471 LTBP1Q14766 1721 aa11.47□□□□□ -0.57
BEST3-203ENST00000331471 BBOX1O75936 387 aa11.46□□□□□ -0.57
BEST3-203ENST00000331471 EPS15P42566 896 aa11.46□□□□□ -0.57
BEST3-203ENST00000331471 VEGFBP49765 207 aa11.46□□□□□ -0.57
BEST3-203ENST00000331471 SCNN1DP51172 638 aa11.46□□□□□ -0.57
BEST3-203ENST00000331471 MPNDQ8N594 471 aa11.46□□□□□ -0.57
BEST3-203ENST00000331471 EFCAB3Q8N7B9 438 aa11.46□□□□□ -0.57
BEST3-203ENST00000331471 ZNF428Q96B54 188 aa11.46□□□□□ -0.57
BEST3-203ENST00000331471 VPS33BQ9H267 617 aa11.46□□□□□ -0.57
BEST3-203ENST00000331471 ABT1Q9ULW3 272 aaKnown RBP11.46□□□□□ -0.57
BEST3-203ENST00000331471 ADAMTS8Q9UP79 889 aa11.46□□□□□ -0.57
BEST3-203ENST00000331471 GRAPQ13588 217 aa11.45□□□□□ -0.58
BEST3-203ENST00000331471 DEFB115Q30KQ5 88 aa11.45□□□□□ -0.58
BEST3-203ENST00000331471 USP50Q70EL3 339 aaPredicted RBP11.45□□□□□ -0.58
BEST3-203ENST00000331471 SP8Q8IXZ3 490 aa11.45□□□□□ -0.58
BEST3-203ENST00000331471 GRAPLQ8TC17 118 aaPredicted RBP11.45□□□□□ -0.58
BEST3-203ENST00000331471 DBF4Q9UBU7 674 aaPredicted RBP11.45□□□□□ -0.58
BEST3-203ENST00000331471 ZNRF3Q9ULT6 936 aa11.45□□□□□ -0.58
BEST3-203ENST00000331471 HOXB7P09629 217 aa11.45□□□□□ -0.58
BEST3-203ENST00000331471 ANKRD13DQ6ZTN6 518 aa11.45□□□□□ -0.58
BEST3-203ENST00000331471 PLBD2Q8NHP8 589 aa11.45□□□□□ -0.58
BEST3-203ENST00000331471 RTFDC1Q9BY42 306 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms