RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 CLCN6P51797 869 aa3.46□□□□□ -1.86
CHD1-201ENST00000284049 GYS2P54840 703 aa3.46□□□□□ -1.86
CHD1-201ENST00000284049 TEX2Q8IWB9 1127 aa3.46□□□□□ -1.86
CHD1-201ENST00000284049 SCUBE3Q8IX30 993 aa3.46□□□□□ -1.86
CHD1-201ENST00000284049 EFCAB5A4FU69 1503 aa3.46□□□□□ -1.86
CHD1-201ENST00000284049 HCLS1P14317 486 aaPredicted RBP3.46□□□□□ -1.86
CHD1-201ENST00000284049 TLR1Q15399 786 aa3.46□□□□□ -1.86
CHD1-201ENST00000284049 LONRF3Q496Y0 759 aa3.46□□□□□ -1.86
CHD1-201ENST00000284049 GMLQ99445 158 aa3.46□□□□□ -1.86
CHD1-201ENST00000284049 CDC6Q99741 560 aa3.46□□□□□ -1.86
CHD1-201ENST00000284049 ZNF408Q9H9D4 720 aa3.46□□□□□ -1.86
CHD1-201ENST00000284049 FAM8A1Q9UBU6 413 aa3.46□□□□□ -1.86
CHD1-201ENST00000284049 PFDN2Q9UHV9 154 aa3.46□□□□□ -1.86
CHD1-201ENST00000284049 RCAN3Q9UKA8 241 aa3.46□□□□□ -1.86
CHD1-201ENST00000284049 RUSC2Q8N2Y8 1516 aa3.46□□□□□ -1.86
CHD1-201ENST00000284049 LDHAP00338 332 aaKnown RBP3.45□□□□□ -1.86
CHD1-201ENST00000284049 ITKQ08881 620 aa3.45□□□□□ -1.86
CHD1-201ENST00000284049 TSGA10IPQ3SY00 556 aa3.45□□□□□ -1.86
CHD1-201ENST00000284049 TNNI3KQ59H18 835 aa3.45□□□□□ -1.86
CHD1-201ENST00000284049 ARSJQ5FYB0 599 aaPredicted RBP3.45□□□□□ -1.86
CHD1-201ENST00000284049 ANO1Q5XXA6 986 aa3.45□□□□□ -1.86
CHD1-201ENST00000284049 BLOC1S3Q6QNY0 202 aa3.45□□□□□ -1.86
CHD1-201ENST00000284049 CMTR1Q8N1G2 835 aaKnown RBP3.45□□□□□ -1.86
CHD1-201ENST00000284049 MTMR8Q96EF0 704 aa3.45□□□□□ -1.86
CHD1-201ENST00000284049 SRCIN1Q9C0H9 1055 aa3.45□□□□□ -1.86
CHD1-201ENST00000284049 EVA1BQ9NVM1 165 aa3.45□□□□□ -1.86
CHD1-201ENST00000284049 GRIN2BQ13224 1484 aa3.45□□□□□ -1.86
CHD1-201ENST00000284049 ZBTB7BO15156 539 aaPredicted RBP3.45□□□□□ -1.86
CHD1-201ENST00000284049 WEE1P30291 646 aa3.45□□□□□ -1.86
CHD1-201ENST00000284049 ORC1Q13415 861 aa3.45□□□□□ -1.86
CHD1-201ENST00000284049 NKX2-3Q8TAU0 364 aa3.45□□□□□ -1.86
CHD1-201ENST00000284049 RNF19AQ9NV58 838 aa3.45□□□□□ -1.86
CHD1-201ENST00000284049 DDX41Q9UJV9 622 aaKnown RBP3.45□□□□□ -1.86
CHD1-201ENST00000284049 LHX6Q9UPM6 363 aa3.45□□□□□ -1.86
CHD1-201ENST00000284049 FGD5Q6ZNL6 1462 aa3.45□□□□□ -1.86
CHD1-201ENST00000284049 C21orf62-AS1Q17RA5 79 aa3.45□□□□□ -1.86
CHD1-201ENST00000284049 SPSB2Q99619 263 aa3.45□□□□□ -1.86
CHD1-201ENST00000284049 LRP2BPQ9P2M1 347 aa3.45□□□□□ -1.86
CHD1-201ENST00000284049 SFMBT1Q9UHJ3 866 aa3.45□□□□□ -1.86
CHD1-201ENST00000284049 SERTM1A2A2V5 107 aa3.45□□□□□ -1.86
CHD1-201ENST00000284049 GIPC1O14908 333 aa3.45□□□□□ -1.86
CHD1-201ENST00000284049 PDPK1O15530 556 aa3.45□□□□□ -1.86
CHD1-201ENST00000284049 EIF4A3P38919 411 aaKnown RBP3.45□□□□□ -1.86
CHD1-201ENST00000284049 FAM160A1Q05DH4 1040 aa3.45□□□□□ -1.86
CHD1-201ENST00000284049 PLEKHG4Q58EX7 1191 aa3.45□□□□□ -1.86
CHD1-201ENST00000284049 ATCAYQ86WG3 371 aa3.45□□□□□ -1.86
CHD1-201ENST00000284049 SLC39A7Q92504 469 aa3.45□□□□□ -1.86
CHD1-201ENST00000284049 SLC52A1Q9NWF4 448 aa3.45□□□□□ -1.86
CHD1-201ENST00000284049 ATP8A1Q9Y2Q0 1164 aa3.45□□□□□ -1.86
CHD1-201ENST00000284049 PCDHGA11Q9Y5H2 935 aa3.45□□□□□ -1.86
CHD1-201ENST00000284049 FMR1Q06787 632 aaKnown RBP eCLIP3.45□□□□□ -1.86
CHD1-201ENST00000284049 PICALMQ13492 652 aa3.45□□□□□ -1.86
CHD1-201ENST00000284049 DGKZQ13574 1117 aa3.45□□□□□ -1.86
CHD1-201ENST00000284049 ZBTB46Q86UZ6 589 aa3.45□□□□□ -1.86
CHD1-201ENST00000284049 SCLT1Q96NL6 688 aa3.45□□□□□ -1.86
CHD1-201ENST00000284049 KBTBD4Q9NVX7 518 aa3.45□□□□□ -1.86
CHD1-201ENST00000284049 COLQQ9Y215 455 aaPredicted RBP3.45□□□□□ -1.86
CHD1-201ENST00000284049 TLR3O15455 904 aaKnown RBP3.44□□□□□ -1.86
CHD1-201ENST00000284049 MLECQ14165 292 aa3.44□□□□□ -1.86
CHD1-201ENST00000284049 SLC4A8Q2Y0W8 1093 aa3.44□□□□□ -1.86
CHD1-201ENST00000284049 NXPE4Q6UWF7 544 aa3.44□□□□□ -1.86
CHD1-201ENST00000284049 SH3TC2Q8TF17 1288 aa3.44□□□□□ -1.86
CHD1-201ENST00000284049 CSRNP1Q96S65 589 aa3.44□□□□□ -1.86
CHD1-201ENST00000284049 V9GY48 417 aaPredicted RBP3.44□□□□□ -1.86
CHD1-201ENST00000284049 DHX9Q08211 1270 aaKnown RBP3.44□□□□□ -1.86
CHD1-201ENST00000284049 BRICD5Q6PL45 260 aa3.44□□□□□ -1.86
CHD1-201ENST00000284049 ZNF354CQ86Y25 554 aa3.44□□□□□ -1.86
CHD1-201ENST00000284049 KCTD15Q96SI1 283 aaPredicted RBP3.44□□□□□ -1.86
CHD1-201ENST00000284049 SNTG2Q9NY99 539 aa3.44□□□□□ -1.86
CHD1-201ENST00000284049 FHAD1B1AJZ9 1412 aa3.44□□□□□ -1.86
CHD1-201ENST00000284049 KIF4AO95239 1232 aa3.44□□□□□ -1.86
CHD1-201ENST00000284049 FGRP09769 529 aa3.44□□□□□ -1.86
CHD1-201ENST00000284049 RAB33AQ14088 237 aa3.44□□□□□ -1.86
CHD1-201ENST00000284049 ACRBPQ8NEB7 543 aa3.44□□□□□ -1.86
CHD1-201ENST00000284049 NIFKQ9BYG3 293 aaKnown RBP3.44□□□□□ -1.86
CHD1-201ENST00000284049 SAP130Q9H0E3 1048 aa3.44□□□□□ -1.86
CHD1-201ENST00000284049 SYNJ2O15056 1496 aa3.44□□□□□ -1.86
CHD1-201ENST00000284049 FAM221BA6H8Z2 402 aa3.44□□□□□ -1.86
CHD1-201ENST00000284049 F6X3S4 739 aa3.44□□□□□ -1.86
CHD1-201ENST00000284049 GJA8P48165 433 aa3.44□□□□□ -1.86
CHD1-201ENST00000284049 EIF6P56537 245 aaKnown RBP3.44□□□□□ -1.86
CHD1-201ENST00000284049 RACK1P63244 317 aaKnown RBP3.44□□□□□ -1.86
CHD1-201ENST00000284049 DTHD1Q6ZMT9 781 aa3.44□□□□□ -1.86
CHD1-201ENST00000284049 MCF2L2Q86YR7 1114 aa3.44□□□□□ -1.86
CHD1-201ENST00000284049 SLC9A9Q8IVB4 645 aa3.44□□□□□ -1.86
CHD1-201ENST00000284049 LEO1Q8WVC0 666 aaPredicted RBP3.44□□□□□ -1.86
CHD1-201ENST00000284049 PMM1Q92871 262 aa3.44□□□□□ -1.86
CHD1-201ENST00000284049 ZFRQ96KR1 1074 aaKnown RBP3.44□□□□□ -1.86
CHD1-201ENST00000284049 SETDB2Q96T68 719 aa3.44□□□□□ -1.86
CHD1-201ENST00000284049 IER2Q9BTL4 223 aa3.44□□□□□ -1.86
CHD1-201ENST00000284049 ARHGEF10LQ9HCE6 1279 aa3.44□□□□□ -1.86
CHD1-201ENST00000284049 INTUQ9ULD6 942 aa3.44□□□□□ -1.86
CHD1-201ENST00000284049 SUPT16HQ9Y5B9 1047 aaKnown RBP3.44□□□□□ -1.86
CHD1-201ENST00000284049 FBXO24O75426 580 aa3.44□□□□□ -1.86
CHD1-201ENST00000284049 LRP10Q7Z4F1 713 aa3.44□□□□□ -1.86
CHD1-201ENST00000284049 PHTF2Q8N3S3 785 aa3.44□□□□□ -1.86
CHD1-201ENST00000284049 PNISRQ8TF01 805 aaKnown RBP3.44□□□□□ -1.86
CHD1-201ENST00000284049 AASDHPPTQ9NRN7 309 aa3.44□□□□□ -1.86
CHD1-201ENST00000284049 PRKAG3Q9UGI9 489 aa3.44□□□□□ -1.86
CHD1-201ENST00000284049 SNPHO15079 494 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms