RNA–Protein interactions for RNA: ENST00000259808.8

RIPK1-201, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RIPK1, Length 4,160 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-201ENST00000259808 CCDC171Q6TFL3 1326 aa17.67■□□□□ 0.42
RIPK1-201ENST00000259808 A0A1B0GVL5 298 aa17.67■□□□□ 0.42
RIPK1-201ENST00000259808 TOP1P11387 765 aaKnown RBP17.67■□□□□ 0.42
RIPK1-201ENST00000259808 TMEM67Q5HYA8 995 aa17.67■□□□□ 0.42
RIPK1-201ENST00000259808 AKAP4Q5JQC9 854 aa17.67■□□□□ 0.42
RIPK1-201ENST00000259808 CCDC70Q6NSX1 233 aa17.67■□□□□ 0.42
RIPK1-201ENST00000259808 GPT2Q8TD30 523 aa17.67■□□□□ 0.42
RIPK1-201ENST00000259808 CEP89Q96ST8 783 aa17.67■□□□□ 0.42
RIPK1-201ENST00000259808 RTL1A6NKG5 1358 aa17.67■□□□□ 0.42
RIPK1-201ENST00000259808 ABCC4O15439 1325 aa17.67■□□□□ 0.42
RIPK1-201ENST00000259808 CDKL5O76039 1030 aa17.66■□□□□ 0.42
RIPK1-201ENST00000259808 MCMDC2Q4G0Z9 681 aa17.66■□□□□ 0.42
RIPK1-201ENST00000259808 ZSCAN25Q6NSZ9 544 aa17.66■□□□□ 0.42
RIPK1-201ENST00000259808 RASEFQ8IZ41 740 aa17.66■□□□□ 0.42
RIPK1-201ENST00000259808 SEC62Q99442 399 aaKnown RBP17.66■□□□□ 0.42
RIPK1-201ENST00000259808 IARSP41252 1262 aaKnown RBP17.66■□□□□ 0.42
RIPK1-201ENST00000259808 USP5P45974 858 aa17.66■□□□□ 0.42
RIPK1-201ENST00000259808 SUCLG2Q96I99 432 aa17.66■□□□□ 0.42
RIPK1-201ENST00000259808 AKAP2Q9Y2D5 859 aa17.66■□□□□ 0.42
RIPK1-201ENST00000259808 AXDND1Q5T1B0 1012 aaPredicted RBP17.66■□□□□ 0.42
RIPK1-201ENST00000259808 TANGO6Q9C0B7 1094 aa17.66■□□□□ 0.42
RIPK1-201ENST00000259808 NSFL1CQ9UNZ2 370 aaKnown RBP17.66■□□□□ 0.42
RIPK1-201ENST00000259808 JAG2Q9Y219 1238 aa17.66■□□□□ 0.42
RIPK1-201ENST00000259808 RUFY3Q7L099 469 aa17.65■□□□□ 0.42
RIPK1-201ENST00000259808 MAP3K5Q99683 1374 aa17.65■□□□□ 0.42
RIPK1-201ENST00000259808 SLC9C2Q5TAH2 1124 aa17.65■□□□□ 0.42
RIPK1-201ENST00000259808 CDC37L1Q7L3B6 337 aa17.65■□□□□ 0.42
RIPK1-201ENST00000259808 FAM89AQ96GI7 184 aa17.65■□□□□ 0.42
RIPK1-201ENST00000259808 A0A087WWV3 80 aa17.65■□□□□ 0.42
RIPK1-201ENST00000259808 IGHMBP2P38935 993 aaKnown RBP17.65■□□□□ 0.42
RIPK1-201ENST00000259808 TXLNAP40222 546 aa17.65■□□□□ 0.42
RIPK1-201ENST00000259808 ARHGAP29Q52LW3 1261 aa17.65■□□□□ 0.42
RIPK1-201ENST00000259808 GNL3LQ9NVN8 582 aaKnown RBP17.65■□□□□ 0.42
RIPK1-201ENST00000259808 TTC21AQ8NDW8 1320 aa17.65■□□□□ 0.42
RIPK1-201ENST00000259808 PRAMEF22A3QJZ6 481 aa17.65■□□□□ 0.42
RIPK1-201ENST00000259808 AFMP43652 599 aa17.65■□□□□ 0.42
RIPK1-201ENST00000259808 METAP2P50579 478 aaKnown RBP eCLIP17.64■□□□□ 0.41
RIPK1-201ENST00000259808 ZKSCAN3Q9BRR0 538 aa17.64■□□□□ 0.41
RIPK1-201ENST00000259808 PTPDC1A2A3K4 754 aa17.64■□□□□ 0.41
RIPK1-201ENST00000259808 STX1AQ16623 288 aa17.64■□□□□ 0.41
RIPK1-201ENST00000259808 CDK5RAP3Q96JB5 506 aa17.64■□□□□ 0.41
RIPK1-201ENST00000259808 SMTNL1A8MU46 457 aa17.64■□□□□ 0.41
RIPK1-201ENST00000259808 MAGEC2Q9UBF1 373 aaPredicted RBP17.64■□□□□ 0.41
RIPK1-201ENST00000259808 RNMTO43148 476 aaKnown RBP17.63■□□□□ 0.41
RIPK1-201ENST00000259808 ALDH1L1O75891 902 aa17.63■□□□□ 0.41
RIPK1-201ENST00000259808 PAG1Q9NWQ8 432 aa17.63■□□□□ 0.41
RIPK1-201ENST00000259808 A1BGP04217 495 aa17.63■□□□□ 0.41
RIPK1-201ENST00000259808 HMGB1P09429 215 aaKnown RBP17.63■□□□□ 0.41
RIPK1-201ENST00000259808 INTS4Q96HW7 963 aaKnown RBP17.63■□□□□ 0.41
RIPK1-201ENST00000259808 EPS15P42566 896 aa17.63■□□□□ 0.41
RIPK1-201ENST00000259808 RUFY1Q96T51 708 aa17.63■□□□□ 0.41
RIPK1-201ENST00000259808 ANKRD18BA2A2Z9 1011 aa17.62■□□□□ 0.41
RIPK1-201ENST00000259808 PROSER3Q2NL68 480 aa17.62■□□□□ 0.41
RIPK1-201ENST00000259808 ADCK5Q3MIX3 580 aa17.62■□□□□ 0.41
RIPK1-201ENST00000259808 SMARCE1Q969G3 411 aa17.62■□□□□ 0.41
RIPK1-201ENST00000259808 ACSBG1Q96GR2 724 aa17.62■□□□□ 0.41
RIPK1-201ENST00000259808 ALG1Q9BT22 464 aa17.62■□□□□ 0.41
RIPK1-201ENST00000259808 MAP3K12Q12852 859 aa17.62■□□□□ 0.41
RIPK1-201ENST00000259808 CEP135Q66GS9 1140 aa17.62■□□□□ 0.41
RIPK1-201ENST00000259808 TRMT1LQ7Z2T5 733 aaKnown RBP17.62■□□□□ 0.41
RIPK1-201ENST00000259808 MIGA1Q8NAN2 632 aa17.62■□□□□ 0.41
RIPK1-201ENST00000259808 VAT1LQ9HCJ6 419 aa17.62■□□□□ 0.41
RIPK1-201ENST00000259808 ARHGEF5Q12774 1597 aa17.62■□□□□ 0.41
RIPK1-201ENST00000259808 SLC27A2O14975 620 aa17.62■□□□□ 0.41
RIPK1-201ENST00000259808 PRDM15P57071 1507 aaPredicted RBP17.62■□□□□ 0.41
RIPK1-201ENST00000259808 LRRIQ1Q96JM4 1722 aa17.62■□□□□ 0.41
RIPK1-201ENST00000259808 PRC1O43663 620 aa17.61■□□□□ 0.41
RIPK1-201ENST00000259808 MEX3CQ5U5Q3 659 aaKnown RBP17.61■□□□□ 0.41
RIPK1-201ENST00000259808 CCDC102AQ96A19 550 aa17.61■□□□□ 0.41
RIPK1-201ENST00000259808 EPB41L2O43491 1005 aaKnown RBP17.61■□□□□ 0.41
RIPK1-201ENST00000259808 KRT18P05783 430 aaKnown RBP17.61■□□□□ 0.41
RIPK1-201ENST00000259808 ME3Q16798 604 aa17.61■□□□□ 0.41
RIPK1-201ENST00000259808 EAF2Q96CJ1 260 aaPredicted RBP17.61■□□□□ 0.41
RIPK1-201ENST00000259808 CENPHQ9H3R5 247 aa17.61■□□□□ 0.41
RIPK1-201ENST00000259808 DEF6Q9H4E7 631 aa17.61■□□□□ 0.41
RIPK1-201ENST00000259808 CGNQ9P2M7 1197 aaKnown RBP17.61■□□□□ 0.41
RIPK1-201ENST00000259808 DYNC1I1O14576 645 aa17.61■□□□□ 0.41
RIPK1-201ENST00000259808 EIF5P55010 431 aaKnown RBP17.61■□□□□ 0.41
RIPK1-201ENST00000259808 ATP2B3Q16720 1220 aa17.61■□□□□ 0.41
RIPK1-201ENST00000259808 KIF4BQ2VIQ3 1234 aa17.61■□□□□ 0.41
RIPK1-201ENST00000259808 SPECC1Q5M775 1068 aa17.61■□□□□ 0.41
RIPK1-201ENST00000259808 NCOA7Q8NI08 942 aa17.61■□□□□ 0.41
RIPK1-201ENST00000259808 HMG20BQ9P0W2 317 aa17.61■□□□□ 0.41
RIPK1-201ENST00000259808 DNAI1Q9UI46 699 aa17.61■□□□□ 0.41
RIPK1-201ENST00000259808 CDC42BPAQ5VT25 1732 aa17.61■□□□□ 0.41
RIPK1-201ENST00000259808 ZFYVE9O95405 1425 aa17.61■□□□□ 0.41
RIPK1-201ENST00000259808 MCM5P33992 734 aa17.61■□□□□ 0.41
RIPK1-201ENST00000259808 SYKP43405 635 aa17.61■□□□□ 0.41
RIPK1-201ENST00000259808 STX17P56962 302 aa17.61■□□□□ 0.41
RIPK1-201ENST00000259808 UVSSAQ2YD98 709 aa17.61■□□□□ 0.41
RIPK1-201ENST00000259808 KLHL34Q8N239 644 aa17.61■□□□□ 0.41
RIPK1-201ENST00000259808 ZNF496Q96IT1 587 aaPredicted RBP17.61■□□□□ 0.41
RIPK1-201ENST00000259808 BRD1O95696 1058 aa17.6■□□□□ 0.41
RIPK1-201ENST00000259808 SNW1Q13573 536 aaKnown RBP17.6■□□□□ 0.41
RIPK1-201ENST00000259808 NOM1Q5C9Z4 860 aaKnown RBP17.6■□□□□ 0.41
RIPK1-201ENST00000259808 NOL7Q9UMY1 257 aaKnown RBP17.6■□□□□ 0.41
RIPK1-201ENST00000259808 MYO5CQ9NQX4 1742 aa17.6■□□□□ 0.41
RIPK1-201ENST00000259808 CBFA2T2O43439 604 aa17.6■□□□□ 0.41
RIPK1-201ENST00000259808 NPHP3Q7Z494 1330 aa17.6■□□□□ 0.41
RIPK1-201ENST00000259808 TBX22Q9Y458 520 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms