RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 IFIT1BQ5T764 474 aaKnown RBP21.49■■□□□ 1.03
SMARCC1-201ENST00000254480 CCDC150Q8NCX0 1101 aa21.49■■□□□ 1.03
SMARCC1-201ENST00000254480 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.49■■□□□ 1.03
SMARCC1-201ENST00000254480 MIGA1Q8NAN2 632 aa21.49■■□□□ 1.03
SMARCC1-201ENST00000254480 TRERF1Q96PN7 1200 aa21.49■■□□□ 1.03
SMARCC1-201ENST00000254480 FGFR1OPO95684 399 aaKnown RBP21.49■■□□□ 1.03
SMARCC1-201ENST00000254480 SPDYE4A6NLX3 237 aa21.49■■□□□ 1.03
SMARCC1-201ENST00000254480 CTAGE5O15320 804 aa21.49■■□□□ 1.03
SMARCC1-201ENST00000254480 NUCB1Q02818 461 aa21.49■■□□□ 1.03
SMARCC1-201ENST00000254480 RBM26Q5T8P6 1007 aaKnown RBP21.49■■□□□ 1.03
SMARCC1-201ENST00000254480 Q6ZUG5 572 aa21.49■■□□□ 1.03
SMARCC1-201ENST00000254480 BICD1Q96G01 975 aa21.49■■□□□ 1.03
SMARCC1-201ENST00000254480 GOLGA6L10A0A0M3HER8 536 aa21.49■■□□□ 1.03
SMARCC1-201ENST00000254480 USO1O60763 962 aaKnown RBP21.49■■□□□ 1.03
SMARCC1-201ENST00000254480 SLC9C2Q5TAH2 1124 aa21.49■■□□□ 1.03
SMARCC1-201ENST00000254480 ALG1Q9BT22 464 aa21.49■■□□□ 1.03
SMARCC1-201ENST00000254480 NCKAP5LQ9HCH0 1330 aa21.48■■□□□ 1.03
SMARCC1-201ENST00000254480 EHMT1Q9H9B1 1298 aa21.48■■□□□ 1.03
SMARCC1-201ENST00000254480 EIF4A2Q14240 407 aaKnown RBP21.48■■□□□ 1.03
SMARCC1-201ENST00000254480 RXRAP19793 462 aa21.47■■□□□ 1.03
SMARCC1-201ENST00000254480 TSPYL6Q8N831 410 aa21.47■■□□□ 1.03
SMARCC1-201ENST00000254480 TRIM47Q96LD4 638 aa21.47■■□□□ 1.03
SMARCC1-201ENST00000254480 ZBTB43O43298 467 aa21.47■■□□□ 1.03
SMARCC1-201ENST00000254480 PDE1AP54750 535 aa21.47■■□□□ 1.03
SMARCC1-201ENST00000254480 MTHFSDQ2M296 383 aaKnown RBP21.47■■□□□ 1.03
SMARCC1-201ENST00000254480 GRIN2AQ12879 1464 aa21.47■■□□□ 1.03
SMARCC1-201ENST00000254480 DENND4BO75064 1496 aaPredicted RBP21.47■■□□□ 1.03
SMARCC1-201ENST00000254480 GRM8O00222 908 aa21.47■■□□□ 1.03
SMARCC1-201ENST00000254480 CADPS2Q86UW7 1296 aa21.47■■□□□ 1.03
SMARCC1-201ENST00000254480 CCDC12Q8WUD4 166 aaPredicted RBP21.47■■□□□ 1.03
SMARCC1-201ENST00000254480 PAFAH1B1P43034 410 aa21.47■■□□□ 1.03
SMARCC1-201ENST00000254480 CCDC102BQ68D86 513 aa21.47■■□□□ 1.03
SMARCC1-201ENST00000254480 ABCA10Q8WWZ4 1543 aa21.47■■□□□ 1.03
SMARCC1-201ENST00000254480 PPIP5K1Q6PFW1 1433 aa21.46■■□□□ 1.03
SMARCC1-201ENST00000254480 RIMBP2O15034 1052 aa21.46■■□□□ 1.03
SMARCC1-201ENST00000254480 WDHD1O75717 1129 aaPredicted RBP21.46■■□□□ 1.03
SMARCC1-201ENST00000254480 TBC1D32Q96NH3 1257 aa21.46■■□□□ 1.03
SMARCC1-201ENST00000254480 RRAGBQ5VZM2 374 aa21.46■■□□□ 1.03
SMARCC1-201ENST00000254480 FERMT2Q96AC1 680 aa21.46■■□□□ 1.03
SMARCC1-201ENST00000254480 DRC1Q96MC2 740 aa21.46■■□□□ 1.03
SMARCC1-201ENST00000254480 SYKP43405 635 aa21.45■■□□□ 1.02
SMARCC1-201ENST00000254480 AMPD3Q01432 767 aa21.45■■□□□ 1.02
SMARCC1-201ENST00000254480 SPECC1Q5M775 1068 aa21.45■■□□□ 1.02
SMARCC1-201ENST00000254480 TMEM87AQ8NBN3 555 aa21.45■■□□□ 1.02
SMARCC1-201ENST00000254480 UBAP1LF5GYI3 381 aa21.45■■□□□ 1.02
SMARCC1-201ENST00000254480 NMIQ13287 307 aaPredicted RBP21.45■■□□□ 1.02
SMARCC1-201ENST00000254480 ZSCAN23Q3MJ62 389 aa21.45■■□□□ 1.02
SMARCC1-201ENST00000254480 SIRT1Q96EB6 747 aa21.45■■□□□ 1.02
SMARCC1-201ENST00000254480 JADE2Q9NQC1 790 aa21.45■■□□□ 1.02
SMARCC1-201ENST00000254480 ZFP91Q96JP5 570 aaPredicted RBP21.45■■□□□ 1.02
SMARCC1-201ENST00000254480 UQCRFS1P1P0C7P4 283 aa21.45■■□□□ 1.02
SMARCC1-201ENST00000254480 NAA16Q6N069 864 aaPredicted RBP21.45■■□□□ 1.02
SMARCC1-201ENST00000254480 N4BP3O15049 544 aa21.44■■□□□ 1.02
SMARCC1-201ENST00000254480 RGS22Q8NE09 1264 aa21.44■■□□□ 1.02
SMARCC1-201ENST00000254480 EXOC1Q9NV70 894 aa21.44■■□□□ 1.02
SMARCC1-201ENST00000254480 HMGXB3Q12766 1538 aa21.44■■□□□ 1.02
SMARCC1-201ENST00000254480 VEZTQ9HBM0 779 aa21.44■■□□□ 1.02
SMARCC1-201ENST00000254480 ZSCAN22P10073 491 aaPredicted RBP21.44■■□□□ 1.02
SMARCC1-201ENST00000254480 TERF1P54274 439 aa21.44■■□□□ 1.02
SMARCC1-201ENST00000254480 MRPL50Q8N5N7 158 aaKnown RBP21.44■■□□□ 1.02
SMARCC1-201ENST00000254480 RTN1Q16799 776 aa21.44■■□□□ 1.02
SMARCC1-201ENST00000254480 CA8P35219 290 aa21.43■■□□□ 1.02
SMARCC1-201ENST00000254480 TNRQ92752 1358 aa21.43■■□□□ 1.02
SMARCC1-201ENST00000254480 ANKRD36BQ8N2N9 1353 aa21.43■■□□□ 1.02
SMARCC1-201ENST00000254480 UBE2HP62256 183 aa21.43■■□□□ 1.02
SMARCC1-201ENST00000254480 ESYT1Q9BSJ8 1104 aa21.43■■□□□ 1.02
SMARCC1-201ENST00000254480 HMG20BQ9P0W2 317 aa21.43■■□□□ 1.02
SMARCC1-201ENST00000254480 KIF20AO95235 890 aa21.43■■□□□ 1.02
SMARCC1-201ENST00000254480 PTGS1P23219 599 aa21.43■■□□□ 1.02
SMARCC1-201ENST00000254480 NLRP3Q96P20 1036 aa21.43■■□□□ 1.02
SMARCC1-201ENST00000254480 MCMDC2Q4G0Z9 681 aa21.42■■□□□ 1.02
SMARCC1-201ENST00000254480 DZIP3Q86Y13 1208 aaKnown RBP21.42■■□□□ 1.02
SMARCC1-201ENST00000254480 TBCAO75347 108 aaKnown RBP21.42■■□□□ 1.02
SMARCC1-201ENST00000254480 STAT6P42226 847 aa21.42■■□□□ 1.02
SMARCC1-201ENST00000254480 CETN1Q12798 172 aa21.42■■□□□ 1.02
SMARCC1-201ENST00000254480 PLS1Q14651 629 aa21.42■■□□□ 1.02
SMARCC1-201ENST00000254480 ANO6Q4KMQ2 910 aa21.42■■□□□ 1.02
SMARCC1-201ENST00000254480 DHX29Q7Z478 1369 aaKnown RBP21.42■■□□□ 1.02
SMARCC1-201ENST00000254480 USP48Q86UV5 1035 aa21.42■■□□□ 1.02
SMARCC1-201ENST00000254480 PLIN2Q99541 437 aa21.42■■□□□ 1.02
SMARCC1-201ENST00000254480 GBP3Q9H0R5 595 aa21.42■■□□□ 1.02
SMARCC1-201ENST00000254480 DNM1Q05193 864 aaKnown RBP21.42■■□□□ 1.02
SMARCC1-201ENST00000254480 HOOK3Q86VS8 718 aa21.42■■□□□ 1.02
SMARCC1-201ENST00000254480 SNW1Q13573 536 aaKnown RBP21.41■■□□□ 1.02
SMARCC1-201ENST00000254480 ZNF608Q9ULD9 1512 aaPredicted RBP21.41■■□□□ 1.02
SMARCC1-201ENST00000254480 RPRD2Q5VT52 1461 aaKnown RBP21.41■■□□□ 1.02
SMARCC1-201ENST00000254480 MSH6P52701 1360 aa21.41■■□□□ 1.02
SMARCC1-201ENST00000254480 HSPA2P54652 639 aa21.41■■□□□ 1.02
SMARCC1-201ENST00000254480 CALM1P0DP23 149 aa21.41■■□□□ 1.02
SMARCC1-201ENST00000254480 CALM2P0DP24 149 aa21.41■■□□□ 1.02
SMARCC1-201ENST00000254480 CALM3P0DP25 149 aa21.41■■□□□ 1.02
SMARCC1-201ENST00000254480 AKNAD1Q5T1N1 836 aa21.41■■□□□ 1.02
SMARCC1-201ENST00000254480 NSD2O96028 1365 aa21.41■■□□□ 1.02
SMARCC1-201ENST00000254480 GNG11P61952 73 aa21.41■■□□□ 1.02
SMARCC1-201ENST00000254480 ARID5AQ03989 594 aa21.41■■□□□ 1.02
SMARCC1-201ENST00000254480 DDB1Q16531 1140 aa21.41■■□□□ 1.02
SMARCC1-201ENST00000254480 ZKSCAN3Q9BRR0 538 aa21.41■■□□□ 1.02
SMARCC1-201ENST00000254480 KIF2AO00139 706 aaPredicted RBP21.41■■□□□ 1.02
SMARCC1-201ENST00000254480 KSR2Q6VAB6 950 aa21.41■■□□□ 1.02
SMARCC1-201ENST00000254480 NSFL1CQ9UNZ2 370 aaKnown RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms