RNA–Protein interactions for RNA: ENST00000254181.8

USP29-201, Transcript of ubiquitin specific peptidase 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP29, Length 3,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-201ENST00000254181 PSME1Q06323 249 aa8.82□□□□□ -1
USP29-201ENST00000254181 MVPQ14764 893 aaKnown RBP8.82□□□□□ -1
USP29-201ENST00000254181 HHATQ5VTY9 493 aa8.82□□□□□ -1
USP29-201ENST00000254181 KIF2CQ99661 725 aa8.82□□□□□ -1
USP29-201ENST00000254181 DDX19BQ9UMR2 479 aa8.82□□□□□ -1
USP29-201ENST00000254181 CNPY2Q9Y2B0 182 aa8.82□□□□□ -1
USP29-201ENST00000254181 AK9Q5TCS8 1911 aa8.81□□□□□ -1
USP29-201ENST00000254181 ROCK1Q13464 1354 aa8.81□□□□□ -1
USP29-201ENST00000254181 COQ9O75208 318 aa8.81□□□□□ -1
USP29-201ENST00000254181 CHD1LQ86WJ1 897 aa8.81□□□□□ -1
USP29-201ENST00000254181 MYLK4Q86YV6 388 aaPredicted RBP8.81□□□□□ -1
USP29-201ENST00000254181 CCDC26Q8TAB7 109 aa8.81□□□□□ -1
USP29-201ENST00000254181 INO80BQ9C086 356 aaPredicted RBP8.81□□□□□ -1
USP29-201ENST00000254181 PICK1Q9NRD5 415 aa8.81□□□□□ -1
USP29-201ENST00000254181 IGF1RP08069 1367 aa8.81□□□□□ -1
USP29-201ENST00000254181 USP27XA6NNY8 438 aa8.81□□□□□ -1
USP29-201ENST00000254181 PROSER2Q86WR7 435 aaPredicted RBP8.81□□□□□ -1
USP29-201ENST00000254181 CEP112Q8N8E3 955 aa8.81□□□□□ -1
USP29-201ENST00000254181 ELP1O95163 1332 aa8.81□□□□□ -1
USP29-201ENST00000254181 VPS37CA5D8V6 355 aaPredicted RBP8.81□□□□□ -1
USP29-201ENST00000254181 A6NJR5 290 aa8.81□□□□□ -1
USP29-201ENST00000254181 ATP8B1O43520 1251 aa8.81□□□□□ -1
USP29-201ENST00000254181 H2AFXP16104 143 aaPredicted RBP8.81□□□□□ -1
USP29-201ENST00000254181 UBE2HP62256 183 aa8.81□□□□□ -1
USP29-201ENST00000254181 CRYMQ14894 314 aa8.81□□□□□ -1
USP29-201ENST00000254181 INTS3Q68E01 1043 aaKnown RBP8.81□□□□□ -1
USP29-201ENST00000254181 SND1Q7KZF4 910 aaKnown RBP eCLIP8.81□□□□□ -1
USP29-201ENST00000254181 PARD3BQ8TEW8 1205 aa8.81□□□□□ -1
USP29-201ENST00000254181 CD248Q9HCU0 757 aa8.81□□□□□ -1
USP29-201ENST00000254181 KIF27Q86VH2 1401 aa8.8□□□□□ -1
USP29-201ENST00000254181 INF2Q27J81 1249 aa8.8□□□□□ -1
USP29-201ENST00000254181 ANO6Q4KMQ2 910 aa8.8□□□□□ -1
USP29-201ENST00000254181 ARMC9Q7Z3E5 817 aa8.8□□□□□ -1
USP29-201ENST00000254181 UHMK1Q8TAS1 419 aaKnown RBP8.8□□□□□ -1
USP29-201ENST00000254181 BICD2Q8TD16 824 aa8.8□□□□□ -1
USP29-201ENST00000254181 LRRCC1Q9C099 1032 aa8.8□□□□□ -1
USP29-201ENST00000254181 EPC1Q9H2F5 836 aa8.8□□□□□ -1
USP29-201ENST00000254181 ORC3Q9UBD5 711 aaPredicted RBP8.8□□□□□ -1
USP29-201ENST00000254181 SFMBT1Q9UHJ3 866 aa8.8□□□□□ -1
USP29-201ENST00000254181 NEFHP12036 1026 aa8.8□□□□□ -1
USP29-201ENST00000254181 ZNF165P49910 485 aa8.8□□□□□ -1
USP29-201ENST00000254181 ZNF75DP51815 510 aa8.8□□□□□ -1
USP29-201ENST00000254181 PPP4CP60510 307 aa8.8□□□□□ -1
USP29-201ENST00000254181 PTPROQ16827 1216 aa8.8□□□□□ -1
USP29-201ENST00000254181 TSGA10IPQ3SY00 556 aa8.8□□□□□ -1
USP29-201ENST00000254181 TAF4BQ92750 862 aa8.8□□□□□ -1
USP29-201ENST00000254181 POU5F1Q01860 360 aaKnown RBP8.8□□□□□ -1
USP29-201ENST00000254181 BMP2KLQ5H9B9 411 aa8.8□□□□□ -1
USP29-201ENST00000254181 STK11IPQ8N1F8 1099 aa8.8□□□□□ -1
USP29-201ENST00000254181 CDC5LQ99459 802 aaKnown RBP8.8□□□□□ -1
USP29-201ENST00000254181 ONECUT3O60422 494 aaPredicted RBP8.79□□□□□ -1
USP29-201ENST00000254181 HDXQ7Z353 690 aa8.79□□□□□ -1
USP29-201ENST00000254181 PHC3Q8NDX5 983 aa8.79□□□□□ -1
USP29-201ENST00000254181 CCDC114Q96M63 670 aa8.79□□□□□ -1
USP29-201ENST00000254181 TRIM4Q9C037 500 aa8.79□□□□□ -1
USP29-201ENST00000254181 YIPF3Q9GZM5 350 aa8.79□□□□□ -1
USP29-201ENST00000254181 PPFIA3O75145 1194 aa8.79□□□□□ -1
USP29-201ENST00000254181 CCDC175P0C221 793 aa8.79□□□□□ -1
USP29-201ENST00000254181 RFX1P22670 979 aa8.79□□□□□ -1
USP29-201ENST00000254181 SFPQP23246 707 aaKnown RBP eCLIP8.79□□□□□ -1
USP29-201ENST00000254181 CCDC92Q53HC0 331 aaPredicted RBP8.79□□□□□ -1
USP29-201ENST00000254181 CADPS2Q86UW7 1296 aa8.79□□□□□ -1
USP29-201ENST00000254181 AFAP1L1Q8TED9 768 aa8.79□□□□□ -1
USP29-201ENST00000254181 FMNL2Q96PY5 1086 aa8.79□□□□□ -1
USP29-201ENST00000254181 BAG1Q99933 345 aaPredicted RBP8.79□□□□□ -1
USP29-201ENST00000254181 PSD3Q9NYI0 1048 aa8.79□□□□□ -1
USP29-201ENST00000254181 FAM169AQ9Y6X4 670 aa8.79□□□□□ -1
USP29-201ENST00000254181 CECR2Q9BXF3 1484 aa8.79□□□□□ -1
USP29-201ENST00000254181 PLEKHO1Q53GL0 409 aaPredicted RBP8.79□□□□□ -1
USP29-201ENST00000254181 NYAP1Q6ZVC0 841 aa8.79□□□□□ -1
USP29-201ENST00000254181 GBP3Q9H0R5 595 aa8.79□□□□□ -1
USP29-201ENST00000254181 MIA2Q96PC5 1412 aa8.79□□□□□ -1
USP29-201ENST00000254181 ERC2O15083 957 aa8.78□□□□□ -1
USP29-201ENST00000254181 ZMYND10O75800 440 aa8.78□□□□□ -1
USP29-201ENST00000254181 CDKL5O76039 1030 aa8.78□□□□□ -1
USP29-201ENST00000254181 PSMC1P62191 440 aaKnown RBP8.78□□□□□ -1
USP29-201ENST00000254181 TYRO3Q06418 890 aa8.78□□□□□ -1
USP29-201ENST00000254181 CCDC158Q5M9N0 1113 aa8.78□□□□□ -1
USP29-201ENST00000254181 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.78□□□□□ -1
USP29-201ENST00000254181 LARGE2Q8N3Y3 721 aa8.78□□□□□ -1
USP29-201ENST00000254181 SPDYE1Q8NFV5 336 aaPredicted RBP8.78□□□□□ -1
USP29-201ENST00000254181 SWAP70Q9UH65 585 aa8.78□□□□□ -1
USP29-201ENST00000254181 TPP2P29144 1249 aaPredicted RBP8.78□□□□□ -1
USP29-201ENST00000254181 PPP2R3AQ06190 1150 aa8.78□□□□□ -1
USP29-201ENST00000254181 LONRF2Q1L5Z9 754 aa8.78□□□□□ -1
USP29-201ENST00000254181 LRRC23Q53EV4 343 aaPredicted RBP8.78□□□□□ -1
USP29-201ENST00000254181 LMBRD2Q68DH5 695 aaPredicted RBP8.78□□□□□ -1
USP29-201ENST00000254181 TMX3Q96JJ7 454 aa8.78□□□□□ -1
USP29-201ENST00000254181 TRAK1Q9UPV9 953 aa8.78□□□□□ -1
USP29-201ENST00000254181 USP16Q9Y5T5 823 aa8.78□□□□□ -1
USP29-201ENST00000254181 ZMYM3Q14202 1370 aa8.78□□□□□ -1
USP29-201ENST00000254181 SPAG9O60271 1321 aaKnown RBP8.78□□□□□ -1
USP29-201ENST00000254181 GOLGA6L7A0A1B0GV03 622 aa8.78□□□□□ -1
USP29-201ENST00000254181 PPFIA2O75334 1257 aa8.78□□□□□ -1
USP29-201ENST00000254181 RPS6KA3P51812 740 aa8.78□□□□□ -1
USP29-201ENST00000254181 LONRF1Q17RB8 773 aa8.78□□□□□ -1
USP29-201ENST00000254181 PAF1Q8N7H5 531 aa8.78□□□□□ -1
USP29-201ENST00000254181 STAG1Q8WVM7 1258 aa8.78□□□□□ -1
USP29-201ENST00000254181 DHX38Q92620 1227 aaKnown RBP8.78□□□□□ -1
USP29-201ENST00000254181 FAXDC2Q96IV6 333 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms