RNA–Protein interactions for RNA: ENST00000194152.3

PCDHB4-201, Transcript of protocadherin beta 4, humanhuman

APPRIS P1 BASIC

Gene PCDHB4, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-201ENST00000194152 CNPY2Q9Y2B0 182 aa15.28■□□□□ 0.04
PCDHB4-201ENST00000194152 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.28■□□□□ 0.04
PCDHB4-201ENST00000194152 BRPF1P55201 1214 aaPredicted RBP15.28■□□□□ 0.04
PCDHB4-201ENST00000194152 RALYLQ86SE5 291 aaKnown RBP15.28■□□□□ 0.04
PCDHB4-201ENST00000194152 METTL22Q9BUU2 404 aaPredicted RBP15.28■□□□□ 0.04
PCDHB4-201ENST00000194152 WWC3Q9ULE0 1092 aa15.28■□□□□ 0.04
PCDHB4-201ENST00000194152 GJB2P29033 226 aa15.27■□□□□ 0.04
PCDHB4-201ENST00000194152 TERF1P54274 439 aa15.27■□□□□ 0.04
PCDHB4-201ENST00000194152 PI16Q6UXB8 463 aa15.27■□□□□ 0.04
PCDHB4-201ENST00000194152 CERS3Q8IU89 383 aa15.27■□□□□ 0.04
PCDHB4-201ENST00000194152 EVI5LQ96CN4 794 aa15.27■□□□□ 0.04
PCDHB4-201ENST00000194152 GTPBP4Q9BZE4 634 aaKnown RBP15.27■□□□□ 0.04
PCDHB4-201ENST00000194152 PTCH1Q13635 1447 aa15.27■□□□□ 0.04
PCDHB4-201ENST00000194152 CDC42BPGQ6DT37 1551 aa15.27■□□□□ 0.04
PCDHB4-201ENST00000194152 A0A0D9SFI3 127 aa15.27■□□□□ 0.04
PCDHB4-201ENST00000194152 BRF1Q92994 677 aa15.27■□□□□ 0.04
PCDHB4-201ENST00000194152 SPATA31D1Q6ZQQ2 1576 aa15.27■□□□□ 0.03
PCDHB4-201ENST00000194152 RAD21O60216 631 aa15.27■□□□□ 0.03
PCDHB4-201ENST00000194152 RXRAP19793 462 aa15.27■□□□□ 0.03
PCDHB4-201ENST00000194152 ATP2B3Q16720 1220 aa15.27■□□□□ 0.03
PCDHB4-201ENST00000194152 CREBRFQ8IUR6 639 aa15.27■□□□□ 0.03
PCDHB4-201ENST00000194152 KIF2CQ99661 725 aa15.27■□□□□ 0.03
PCDHB4-201ENST00000194152 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.27■□□□□ 0.03
PCDHB4-201ENST00000194152 AGLP35573 1532 aa15.26■□□□□ 0.03
PCDHB4-201ENST00000194152 ZNF500O60304 480 aaPredicted RBP15.26■□□□□ 0.03
PCDHB4-201ENST00000194152 TAF5LO75529 589 aa15.26■□□□□ 0.03
PCDHB4-201ENST00000194152 ATP6V1AP38606 617 aa15.26■□□□□ 0.03
PCDHB4-201ENST00000194152 MCM2P49736 904 aa15.26■□□□□ 0.03
PCDHB4-201ENST00000194152 KIF20AO95235 890 aa15.26■□□□□ 0.03
PCDHB4-201ENST00000194152 SNX21Q969T3 373 aa15.26■□□□□ 0.03
PCDHB4-201ENST00000194152 LIMCH1Q9UPQ0 1083 aa15.26■□□□□ 0.03
PCDHB4-201ENST00000194152 SNX14Q9Y5W7 946 aa15.26■□□□□ 0.03
PCDHB4-201ENST00000194152 USP31Q70CQ4 1352 aa15.25■□□□□ 0.03
PCDHB4-201ENST00000194152 SASH1O94885 1247 aa15.25■□□□□ 0.03
PCDHB4-201ENST00000194152 TSPY26PQ9H489 355 aa15.25■□□□□ 0.03
PCDHB4-201ENST00000194152 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.25■□□□□ 0.03
PCDHB4-201ENST00000194152 IBTKQ9P2D0 1353 aaPredicted RBP15.25■□□□□ 0.03
PCDHB4-201ENST00000194152 MBD3O95983 291 aa15.24■□□□□ 0.03
PCDHB4-201ENST00000194152 CKAP2LQ8IYA6 745 aa15.24■□□□□ 0.03
PCDHB4-201ENST00000194152 DLC1Q96QB1 1528 aa15.24■□□□□ 0.03
PCDHB4-201ENST00000194152 SGSM2O43147 1006 aa15.24■□□□□ 0.03
PCDHB4-201ENST00000194152 PSMA5P28066 241 aa15.24■□□□□ 0.03
PCDHB4-201ENST00000194152 TRDNQ13061 729 aa15.24■□□□□ 0.03
PCDHB4-201ENST00000194152 NOLC1Q14978 699 aaKnown RBP eCLIP15.24■□□□□ 0.03
PCDHB4-201ENST00000194152 ADGRL3Q9HAR2 1447 aa15.24■□□□□ 0.03
PCDHB4-201ENST00000194152 MED14O60244 1454 aa15.23■□□□□ 0.03
PCDHB4-201ENST00000194152 DNM1Q05193 864 aaKnown RBP15.23■□□□□ 0.03
PCDHB4-201ENST00000194152 FAM98CQ17RN3 349 aaKnown RBP15.23■□□□□ 0.03
PCDHB4-201ENST00000194152 UTP14CQ5TAP6 766 aaKnown RBP15.23■□□□□ 0.03
PCDHB4-201ENST00000194152 CREB3L3Q68CJ9 461 aa15.23■□□□□ 0.03
PCDHB4-201ENST00000194152 MYRIPQ8NFW9 859 aa15.23■□□□□ 0.03
PCDHB4-201ENST00000194152 WDR33Q9C0J8 1336 aaKnown RBP15.23■□□□□ 0.03
PCDHB4-201ENST00000194152 A0A1B0GUL7 405 aa15.23■□□□□ 0.03
PCDHB4-201ENST00000194152 UBAP1LF5GYI3 381 aa15.23■□□□□ 0.03
PCDHB4-201ENST00000194152 DDB1Q16531 1140 aa15.23■□□□□ 0.03
PCDHB4-201ENST00000194152 TNNI3KQ59H18 835 aa15.23■□□□□ 0.03
PCDHB4-201ENST00000194152 TTLL5Q6EMB2 1281 aa15.23■□□□□ 0.03
PCDHB4-201ENST00000194152 NCOA5Q9HCD5 579 aaKnown RBP15.23■□□□□ 0.03
PCDHB4-201ENST00000194152 FPGT-TNNI3KV9GXZ4 949 aa15.23■□□□□ 0.03
PCDHB4-201ENST00000194152 SHPRHQ149N8 1683 aa15.23■□□□□ 0.03
PCDHB4-201ENST00000194152 GADD45BO75293 160 aaPredicted RBP15.22■□□□□ 0.03
PCDHB4-201ENST00000194152 MINDY4BA8MYZ0 360 aa15.22■□□□□ 0.03
PCDHB4-201ENST00000194152 ZNF589Q86UQ0 364 aaPredicted RBP15.22■□□□□ 0.03
PCDHB4-201ENST00000194152 DZIP3Q86Y13 1208 aaKnown RBP15.22■□□□□ 0.03
PCDHB4-201ENST00000194152 DBNLQ9UJU6 430 aaKnown RBP15.22■□□□□ 0.03
PCDHB4-201ENST00000194152 BECN2A8MW95 431 aa15.22■□□□□ 0.03
PCDHB4-201ENST00000194152 DIP2AQ14689 1571 aa15.21■□□□□ 0.03
PCDHB4-201ENST00000194152 NUP133Q8WUM0 1156 aa15.21■□□□□ 0.03
PCDHB4-201ENST00000194152 LRP2BPQ9P2M1 347 aa15.21■□□□□ 0.03
PCDHB4-201ENST00000194152 ADCY9O60503 1353 aa15.21■□□□□ 0.03
PCDHB4-201ENST00000194152 STX6O43752 255 aa15.21■□□□□ 0.03
PCDHB4-201ENST00000194152 HS1BP3Q53T59 392 aa15.21■□□□□ 0.03
PCDHB4-201ENST00000194152 GIMAP6Q6P9H5 292 aa15.21■□□□□ 0.03
PCDHB4-201ENST00000194152 BCL2L12Q9HB09 334 aa15.21■□□□□ 0.03
PCDHB4-201ENST00000194152 LARGE1O95461 756 aa15.21■□□□□ 0.02
PCDHB4-201ENST00000194152 ADORA1P30542 326 aa15.21■□□□□ 0.02
PCDHB4-201ENST00000194152 OTUD7BQ6GQQ9 843 aa15.21■□□□□ 0.02
PCDHB4-201ENST00000194152 USP48Q86UV5 1035 aa15.2■□□□□ 0.02
PCDHB4-201ENST00000194152 RAI14Q9P0K7 980 aa15.2■□□□□ 0.02
PCDHB4-201ENST00000194152 ZBTB1Q9Y2K1 713 aa15.2■□□□□ 0.02
PCDHB4-201ENST00000194152 PCDH11XQ9BZA7 1347 aa15.2■□□□□ 0.02
PCDHB4-201ENST00000194152 PCDH11YQ9BZA8 1340 aa15.2■□□□□ 0.02
PCDHB4-201ENST00000194152 SAMD1Q6SPF0 538 aaPredicted RBP15.2■□□□□ 0.02
PCDHB4-201ENST00000194152 MIGA1Q8NAN2 632 aa15.2■□□□□ 0.02
PCDHB4-201ENST00000194152 PLBD2Q8NHP8 589 aa15.2■□□□□ 0.02
PCDHB4-201ENST00000194152 ZNF219Q9P2Y4 722 aaPredicted RBP15.2■□□□□ 0.02
PCDHB4-201ENST00000194152 NIP7Q9Y221 180 aaKnown RBP eCLIP15.2■□□□□ 0.02
PCDHB4-201ENST00000194152 GOLGA6L19H0YKK7 550 aa15.2■□□□□ 0.02
PCDHB4-201ENST00000194152 IRS4O14654 1257 aaPredicted RBP15.2■□□□□ 0.02
PCDHB4-201ENST00000194152 POLR3DP05423 398 aaPredicted RBP15.2■□□□□ 0.02
PCDHB4-201ENST00000194152 APOBRQ0VD83 1088 aa15.2■□□□□ 0.02
PCDHB4-201ENST00000194152 NSFL1CQ9UNZ2 370 aaKnown RBP15.2■□□□□ 0.02
PCDHB4-201ENST00000194152 NBPF26B4DH59 902 aa15.19■□□□□ 0.02
PCDHB4-201ENST00000194152 NBPF14Q5TI25 921 aa15.19■□□□□ 0.02
PCDHB4-201ENST00000194152 NBPF10Q6P3W6 841 aaKnown RBP15.19■□□□□ 0.02
PCDHB4-201ENST00000194152 LRSAM1Q6UWE0 723 aa15.19■□□□□ 0.02
PCDHB4-201ENST00000194152 Q6ZUG5 572 aa15.19■□□□□ 0.02
PCDHB4-201ENST00000194152 NBPF15Q8N660 670 aa15.19■□□□□ 0.02
PCDHB4-201ENST00000194152 PAG1Q9NWQ8 432 aa15.19■□□□□ 0.02
PCDHB4-201ENST00000194152 TMEM63CQ9P1W3 806 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms