RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 Zc3h12cQ5DTV4 884 aa10.97□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Lamb3Q61087 1168 aa10.97□□□□□ -0.65
Ldlr-202ENSMUST00000213114 DymQ8CHY3 669 aa10.97□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Tmc2Q8R4P4 888 aa10.97□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Prl3d3A0A0M6L0J6 224 aa10.97□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Arid4aF8VPQ2 1261 aaKnown RBP10.97□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Ppp1r21Q3TDD9 780 aa10.97□□□□□ -0.65
Ldlr-202ENSMUST00000213114 CoilQ5SU73 570 aa10.97□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Tgfb1i1Q62219 461 aa10.97□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Mtmr3Q8K296 1196 aa10.97□□□□□ -0.65
Ldlr-202ENSMUST00000213114 NsmfQ99NF2 532 aa10.97□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Speer4dL7N216 212 aa10.97□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Lrrcc1Q69ZB0 1026 aa10.97□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Rab3gap1Q80UJ7 981 aa10.97□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Rbm19Q8R3C6 952 aaKnown RBP10.97□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Slc14a2Q8R4T9 930 aa10.97□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Luzp1Q8R4U7 1068 aaKnown RBP10.97□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Ccdc112A0AUP1 442 aa10.96□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Metap2O08663 478 aaKnown RBP10.96□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Dnm1P39053 867 aa10.96□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Adora1Q60612 326 aa10.96□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Bend3Q6PAL0 825 aa10.96□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Naa30Q8CES0 364 aa10.96□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Serpina10Q8R121 448 aa10.96□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Rdm1Q9CQK3 281 aa10.96□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Mrvi1Q9WUX5 899 aaKnown RBP10.96□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Cyp26c1B2RXA7 518 aa10.96□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Fnbp4Q6ZQ03 1031 aa10.96□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Cnot6lQ8VEG6 555 aa10.96□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Sil1Q9EPK6 465 aa10.96□□□□□ -0.65
Ldlr-202ENSMUST00000213114 ParvgQ9ERD8 331 aa10.96□□□□□ -0.65
Ldlr-202ENSMUST00000213114 Asic4Q7TNS7 539 aa10.96□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Fam160b2Q80YR2 744 aa10.96□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Znf771Q8BJ90 317 aa10.96□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Cadps2Q8BYR5 1297 aa10.96□□□□□ -0.66
Ldlr-202ENSMUST00000213114 CebpzP53569 1052 aaKnown RBP10.95□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Med14A2ABV5 1459 aaKnown RBP10.95□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Zscan29E9Q5B4 869 aa10.95□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Tmem143Q8VD26 458 aa10.95□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Kcna6Q61923 529 aa10.95□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Gimap8Q75N62 688 aa10.95□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Tango6Q8C3S2 1079 aa10.95□□□□□ -0.66
Ldlr-202ENSMUST00000213114 4930504O13RikQ8C5Z9 145 aa10.95□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Zbtb43Q9DAI4 467 aa10.95□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Dnaaf4Q8R368 420 aa10.95□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Lmbr1Q9JIT0 490 aa10.95□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Stx1aO35526 288 aa10.94□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Tyro3P55144 880 aa10.94□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Ccdc34Q3UI66 367 aa10.94□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Cep120Q7TSG1 988 aa10.94□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Miga2Q8BK03 593 aa10.94□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Ift57Q8BXG3 429 aa10.94□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Cdca7lQ922M5 438 aa10.94□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Qtrt2B8ZXI1 415 aa10.94□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Sult6b1P0CC03 303 aa10.94□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Clcn1Q64347 994 aa10.94□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Kank4Q6P9J5 1016 aa10.94□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Ccdc82Q6PG04 518 aa10.94□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Znf704Q9ERQ3 566 aa10.94□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Abca6Q8K441 1624 aa10.94□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Ncoa4Q5U4H9 625 aa10.93□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Adam1aQ60813 791 aa10.93□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Trim25Q61510 634 aaKnown RBP10.93□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Rps6kb1Q8BSK8 525 aa10.93□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Ccdc150Q8CDI7 1110 aa10.93□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Kdm3aQ6PCM1 1323 aa10.93□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Dip2cE9PWR4 1557 aa10.93□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Eya2O08575 532 aa10.93□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Card10P58660 1021 aa10.93□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Pdcl2Q78Y63 240 aa10.93□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Rnf41Q8BH75 317 aa10.93□□□□□ -0.66
Ldlr-202ENSMUST00000213114 PigbQ9JJQ0 542 aa10.93□□□□□ -0.66
Ldlr-202ENSMUST00000213114 TnksQ6PFX9 1320 aa10.93□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Pram1Q6BCL1 675 aa10.93□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Galntl5Q9D4M9 431 aa10.93□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Stx8O88983 236 aa10.93□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Anxa1P10107 346 aaKnown RBP10.93□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Cers3Q1A3B0 383 aa10.93□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Unc5clQ6R653 518 aa10.93□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Otud6bQ8K2H2 294 aa10.93□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Vps16Q920Q4 839 aa10.93□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Ncapd2Q8K2Z4 1392 aa10.92□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Dhx8A2A4P0 1244 aaKnown RBP10.92□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Cbx1P83917 185 aaKnown RBP10.92□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Ubash3aQ3V3E1 624 aa10.92□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Pla2g4fQ50L41 855 aa10.92□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Cep131Q62036 1060 aa10.92□□□□□ -0.66
Ldlr-202ENSMUST00000213114 RarsQ9D0I9 660 aaKnown RBP10.92□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Gm7347D3YYI9 267 aa10.92□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Speer4aF8VPX6 267 aa10.92□□□□□ -0.66
Ldlr-202ENSMUST00000213114 MycnP03966 462 aaKnown RBP10.92□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Ccdc102aQ3TMW1 549 aa10.92□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Ncbp1Q3UYV9 790 aaKnown RBP10.92□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Kidins220E9Q9B7 1793 aa10.92□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Odf2A3KGV1 830 aaKnown RBP10.92□□□□□ -0.66
Ldlr-202ENSMUST00000213114 HellsQ60848 821 aa10.92□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Necab1Q8BG18 352 aa10.92□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Zkscan8Q8BSL0 588 aa10.92□□□□□ -0.66
Ldlr-202ENSMUST00000213114 Ppp4r3bQ922R5 820 aa10.92□□□□□ -0.66
Ldlr-202ENSMUST00000213114 CenpqQ9CPQ5 267 aa10.92□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms