RNA–Protein interactions for RNA: ENSMUST00000211788.1

Ptpre-208, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

TSL 1 (best) BASIC

Gene Ptpre, Length 2,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-208ENSMUST00000211788 CtifQ6PEE2 600 aaKnown RBP12.48□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Pof1bQ8K4L4 587 aa12.48□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Rcan3Q9JKK0 239 aa12.48□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Add2Q9QYB8 725 aa12.48□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Gm45015A0A140LII9 184 aa12.47□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Gm18336A0A140LIU8 765 aa12.47□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Mmp14P53690 582 aa12.47□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Strn4P58404 760 aa12.47□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Ddx54Q8K4L0 874 aaKnown RBP12.47□□□□□ -0.41
Ptpre-208ENSMUST00000211788 ApobrQ8VBT6 942 aa12.47□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Cap2Q9CYT6 476 aa12.47□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Cwc25Q9DBF7 416 aa12.47□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Stard3nlQ9DCI3 235 aa12.47□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Mst1rQ62190 1378 aa12.47□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Elmsan1E9Q2I4 1089 aaKnown RBP12.46□□□□□ -0.41
Ptpre-208ENSMUST00000211788 MecomP14404 1042 aa12.46□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Mdm2P23804 489 aa12.46□□□□□ -0.41
Ptpre-208ENSMUST00000211788 F2rP30558 430 aa12.46□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Pank2Q3U4S0 443 aa12.46□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Smg7Q5RJH6 1138 aaKnown RBP12.46□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Ctr9Q62018 1173 aaKnown RBP12.46□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Rbm8a2A0A0N4SUH6 174 aa12.46□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Zscan25B2RX31 543 aa12.46□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Myd88P22366 296 aa12.46□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Kif2aP28740 705 aa12.46□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Arglu1Q3UL36 271 aaKnown RBP12.46□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Ddx19aQ61655 478 aaKnown RBP12.46□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Rhot2Q8JZN7 620 aa12.46□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Rbm8aQ9CWZ3 174 aa12.46□□□□□ -0.41
Ptpre-208ENSMUST00000211788 Ltb4r2Q9JJL9 360 aa12.46□□□□□ -0.41
Ptpre-208ENSMUST00000211788 AK157302I3ITR1 129 aa12.45□□□□□ -0.42
Ptpre-208ENSMUST00000211788 EzrP26040 586 aaKnown RBP12.45□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Mctp2Q5RJH2 878 aa12.45□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Ankib1Q6ZPS6 1085 aa12.45□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Tti2Q8BGV4 512 aa12.45□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Chmp3Q9CQ10 224 aa12.45□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Rufy3Q9D394 469 aa12.45□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Isca1Q9D924 129 aa12.45□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Ak2Q9WTP6 239 aa12.45□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Rbbp8nlA2ABX0 614 aa12.45□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Gm973E9Q295 1059 aa12.45□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Sult6b1P0CC03 303 aa12.45□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Ptgs1P22437 602 aa12.45□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Gm12185Q5NCB2 835 aa12.45□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Rrs1Q9CYH6 365 aaKnown RBP12.45□□□□□ -0.42
Ptpre-208ENSMUST00000211788 AatfQ9JKX4 526 aaKnown RBP12.45□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Ank1Q02357 1862 aa12.44□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Crb1Q8VHS2 1405 aa12.44□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Prl3d3A0A0M6L0J6 224 aa12.44□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Ms4a1P19437 291 aa12.44□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Vps54Q5SPW0 977 aa12.44□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Sass6Q80UK7 654 aa12.44□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Cdca7lQ922M5 438 aa12.44□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Zfp597E9Q6S0 419 aa12.44□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Nol12Q8BG17 217 aa12.44□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Q9D9S1 216 aa12.44□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Tpm3P21107 285 aaKnown RBP12.43□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Adam1aQ60813 791 aa12.43□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Sgsm2Q80U12 1005 aa12.43□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Ubxn10Q8BG34 277 aa12.43□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Ttc19Q8CC21 365 aa12.43□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Chaf1aQ9QWF0 911 aa12.43□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Nphp3Q7TNH6 1325 aa12.43□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Tbc1d4Q8BYJ6 1307 aa12.43□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Ugt1a5B2RT14 529 aa12.43□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Fam184aE9PW83 1143 aa12.43□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Gadd45bP22339 160 aa12.43□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Sparcl1P70663 650 aa12.43□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Igflr1Q3U4N7 345 aa12.43□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Ddx46Q569Z5 1032 aaKnown RBP12.43□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Ppp4r3aQ6P2K6 820 aa12.43□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Q8BT18 775 aa12.43□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Gimap5Q8BWF2 308 aa12.43□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Smc4Q8CG47 1286 aa12.43□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Polr3dQ91WD1 398 aa12.43□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Fam213aQ9CYH2 218 aa12.43□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Akap11E9Q777 1895 aa12.43□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Syt1P46096 421 aa12.42□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Hvcn1Q3U2S8 269 aa12.42□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Ddx41Q91VN6 622 aaKnown RBP12.42□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Ehd4Q9EQP2 541 aa12.42□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Timm10P62073 90 aa12.42□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Cers3Q1A3B0 383 aa12.42□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Nlrp1aQ2LKU9 1182 aa12.42□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Atg9aQ68FE2 551 aa12.42□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Cchcr1Q8K2I2 770 aa12.42□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Tceanc2Q8R2M0 207 aa12.42□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Mylk2Q8VCR8 613 aa12.42□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Kcnb2A6H8H5 907 aa12.41□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Prl3d2F6R3P9 224 aa12.41□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Pkp1P97350 728 aaKnown RBP12.41□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Dmrt2Q8BG36 561 aa12.41□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Ulbp1Q8HWA3 334 aa12.41□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Tmc2Q8R4P4 888 aa12.41□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Smc3Q9CW03 1217 aaKnown RBP12.41□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Sos2Q02384 1333 aa12.41□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Mrc1Q61830 1456 aa12.41□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Capn2O08529 700 aa12.4□□□□□ -0.42
Ptpre-208ENSMUST00000211788 NfkbibQ60778 359 aa12.4□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Zeb2Q9R0G7 1215 aa12.4□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 18.9 ms