RNA–Protein interactions for RNA: ENSMUST00000209979.1

Ptpre-204, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ptpre, Length 4,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-204ENSMUST00000209979 Traf3ip3Q8C0G2 513 aa10.32□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Nuf2Q99P69 463 aa10.32□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Becn2P0DM65 447 aa10.32□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Psmd1Q3TXS7 953 aa10.32□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Taok1Q5F2E8 1001 aa10.32□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Sh3d21Q7TSG5 549 aa10.32□□□□□ -0.76
Ptpre-204ENSMUST00000209979 IkQ9Z1M8 557 aaKnown RBP10.32□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Zfp213E9QAW0 468 aa10.32□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Tuft1O08970 390 aa10.32□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Ptgs1P22437 602 aa10.32□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Frat1P70339 274 aa10.32□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Gbp5Q8CFB4 590 aa10.32□□□□□ -0.76
Ptpre-204ENSMUST00000209979 SyncQ9EPM5 470 aa10.32□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Traf3ip1Q149C2 625 aa10.31□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Ccdc122Q8BVN0 290 aa10.31□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Rab44Q8CB87 725 aa10.31□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Evi5lH3BKQ3 813 aa10.31□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Trim34bJ3QNR8 485 aa10.31□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Senp1P59110 640 aa10.31□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Sox13Q04891 613 aa10.31□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Spats2lQ91WJ7 558 aaKnown RBP10.31□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Hdac9Q99N13 588 aa10.31□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Galntl5Q9D4M9 431 aa10.31□□□□□ -0.76
Ptpre-204ENSMUST00000209979 AmfrQ9R049 643 aa10.31□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Plcb1Q9Z1B3 1216 aa10.31□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Catsper2A2ARP9 588 aa10.31□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Ctdp1Q7TSG2 960 aa10.31□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Gm21698A0A087WQP8 267 aa10.31□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Gm21663A0A0G2JE01 267 aa10.31□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Gm7347D3YYI9 267 aa10.31□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Fam186bD3Z420 943 aa10.31□□□□□ -0.76
Ptpre-204ENSMUST00000209979 5031410I06RikE9Q4E0 267 aa10.31□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Speer4dL7N216 212 aa10.31□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Trim17Q7TPM3 477 aa10.31□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Zswim4Q8C7B8 1101 aa10.31□□□□□ -0.76
Ptpre-204ENSMUST00000209979 HscbQ8K3A0 234 aa10.31□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Hs2st1Q8R3H7 356 aa10.31□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Serpinc1P32261 465 aa10.3□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Tmed1Q3V009 227 aa10.3□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Pet2A2AHY8 747 aa10.3□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Cracr2aQ3UP38 310 aa10.3□□□□□ -0.76
Ptpre-204ENSMUST00000209979 RragbQ6NTA4 374 aa10.3□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Pik3r4Q8VD65 1358 aa10.3□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Pak2Q8CIN4 524 aa10.3□□□□□ -0.76
Ptpre-204ENSMUST00000209979 IbtkQ6ZPR6 1352 aaKnown RBP10.3□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Psmc4P54775 418 aa10.29□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Ssrp1Q08943 708 aaKnown RBP10.29□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Krt79Q8VED5 531 aa10.29□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Nphp3Q7TNH6 1325 aa10.29□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Cnnm1Q0GA42 951 aa10.29□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Ano6Q6P9J9 911 aa10.29□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Vps37dQ810I0 261 aa10.29□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Slc26a8Q8R0C3 999 aa10.29□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Mphosph6Q9D1Q1 161 aa10.29□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Cd109Q8R422 1442 aa10.29□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Serpinb1cQ5SV42 375 aa10.29□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Dnajc8Q6NZB0 253 aaKnown RBP10.29□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Snd1Q78PY7 910 aaKnown RBP10.29□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Tmem266Q8BZB3 538 aa10.29□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Cdan1Q8CC12 1239 aa10.29□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Mcur1Q9CXD6 340 aa10.29□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Zfp651E9PZ11 729 aa10.29□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Bcl2l13P59017 434 aa10.29□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Cct5P80316 541 aaKnown RBP10.29□□□□□ -0.76
Ptpre-204ENSMUST00000209979 HdxQ14B70 692 aa10.29□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Ccdc110Q3V125 848 aa10.29□□□□□ -0.76
Ptpre-204ENSMUST00000209979 MmeQ61391 750 aa10.29□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Ccdc7Q9D541 371 aa10.29□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Ccdc175E9PVB3 822 aa10.28□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Akr1b8P45377 316 aa10.28□□□□□ -0.76
Ptpre-204ENSMUST00000209979 VeztQ3ZK22 780 aa10.28□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Ublcp1Q8BGR9 318 aa10.28□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Gkap1Q9JMB0 366 aa10.28□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Bfsp1A2AMT1 669 aa10.28□□□□□ -0.76
Ptpre-204ENSMUST00000209979 RilpQ5ND29 369 aa10.28□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Cacna2d4Q5RJF7 1116 aa10.28□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Atp2a1Q8R429 994 aa10.28□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Polr3dQ91WD1 398 aa10.28□□□□□ -0.76
Ptpre-204ENSMUST00000209979 HnrnpcQ9Z204 313 aaKnown RBP10.28□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Il4rP16382 810 aa10.28□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Zfyve27Q3TXX3 415 aa10.28□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Tmem67Q8BR76 992 aa10.28□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Ppp1r42Q8R1Z4 357 aa10.28□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Rad50P70388 1312 aa10.28□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Fkbp4P30416 458 aa10.28□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Prkar2bP31324 416 aa10.28□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Zpr1Q62384 459 aa10.28□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Bag3Q9JLV1 577 aaKnown RBP10.28□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Ncapd3Q6ZQK0 1506 aa10.28□□□□□ -0.76
Ptpre-204ENSMUST00000209979 CltaO08585 235 aa10.27□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Esyt1Q3U7R1 1092 aaKnown RBP10.27□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Ankrd40Q5SUE8 363 aa10.27□□□□□ -0.76
Ptpre-204ENSMUST00000209979 CenppQ9CZ92 286 aa10.27□□□□□ -0.76
Ptpre-204ENSMUST00000209979 Rabgap1A2AWA9 1064 aa10.27□□□□□ -0.77
Ptpre-204ENSMUST00000209979 NapbP28663 298 aa10.27□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Capza3P70190 299 aa10.27□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Rnf40Q3U319 1001 aa10.27□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Vps52Q8C754 723 aaKnown RBP10.27□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Fermt2Q8CIB5 680 aa10.27□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Nop56Q9D6Z1 580 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 12 ms