RNA–Protein interactions for RNA: ENSMUST00000171342.2

Rnf41-202, Transcript of E3 ubiquitin-protein ligase NRDP1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf41, Length 3,283 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf41-202ENSMUST00000171342 Smarcc1P97496 1104 aa11.75□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Rbm27Q5SFM8 1060 aaKnown RBP11.75□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Rbm17Q8JZX4 405 aaKnown RBP11.75□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Sos2Q02384 1333 aa11.75□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Ddit3P35639 168 aa11.74□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Iffo2Q8R2V2 512 aa11.74□□□□□ -0.53
Rnf41-202ENSMUST00000171342 BcorQ8CGN4 1759 aa11.74□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Atp2b3Q0VF55 1220 aa11.74□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Zbtb38Q3LR78 1197 aa11.74□□□□□ -0.53
Rnf41-202ENSMUST00000171342 EappQ5BU09 281 aa11.74□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Itga6Q61739 1091 aa11.74□□□□□ -0.53
Rnf41-202ENSMUST00000171342 PtmsQ9D0J8 101 aaKnown RBP11.74□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Cchcr1Q8K2I2 770 aa11.73□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Erc1Q99MI1 1120 aa11.73□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Rufy3Q9D394 469 aa11.73□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Psma5Q9Z2U1 241 aaKnown RBP11.73□□□□□ -0.53
Rnf41-202ENSMUST00000171342 TnksQ6PFX9 1320 aa11.73□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Irgm2A0A140LIF8 407 aa11.73□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Tmem266Q8BZB3 538 aa11.73□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Atf7Q8R0S1 413 aa11.73□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Lrrfip2Q91WK0 415 aa11.73□□□□□ -0.53
Rnf41-202ENSMUST00000171342 FocadA2AKG8 1798 aa11.73□□□□□ -0.53
Rnf41-202ENSMUST00000171342 IncenpQ9WU62 880 aa11.73□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Cyp2c23E9Q5K4 494 aa11.72□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Ppfia3P60469 1194 aa11.72□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Ptcd1Q8C2E4 695 aaKnown RBP11.72□□□□□ -0.53
Rnf41-202ENSMUST00000171342 TsksO54887 585 aa11.72□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Syt1P46096 421 aa11.72□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Kank4Q6P9J5 1016 aa11.72□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Asap2Q7SIG6 958 aa11.72□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Sgsm2Q80U12 1005 aa11.72□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Susd4Q8BH32 490 aa11.72□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Nek11Q8C0Q4 628 aa11.72□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Trip6Q9Z1Y4 480 aa11.72□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Shank2Q80Z38 1476 aa11.72□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Akap11E9Q777 1895 aa11.72□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Eva1cP58659 440 aa11.71□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Zdhhc9P59268 364 aa11.71□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Pkp1P97350 728 aaKnown RBP11.71□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Zc3h12cQ5DTV4 884 aa11.71□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Dnttip2Q8R2M2 758 aaKnown RBP11.71□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Ccne2Q9Z238 404 aa11.71□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Pde4bB1AWC9 736 aa11.71□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Bin2D3Z6Q9 489 aa11.71□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Elmsan1E9Q2I4 1089 aaKnown RBP11.71□□□□□ -0.53
Rnf41-202ENSMUST00000171342 FosbP13346 338 aa11.71□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Hand2Q61039 217 aa11.71□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Tsr2Q8C8T8 191 aa11.71□□□□□ -0.53
Rnf41-202ENSMUST00000171342 StrbpQ91WM1 672 aaKnown RBP11.71□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Tbc1d7Q9D0K0 293 aa11.71□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Add2Q9QYB8 725 aa11.71□□□□□ -0.53
Rnf41-202ENSMUST00000171342 Slc4a1P04919 929 aa11.71□□□□□ -0.54
Rnf41-202ENSMUST00000171342 Emilin2Q8K482 1074 aa11.71□□□□□ -0.54
Rnf41-202ENSMUST00000171342 Mad1l1Q9WTX8 717 aaKnown RBP11.71□□□□□ -0.54
Rnf41-202ENSMUST00000171342 Ddx60E9PZQ1 1711 aa11.71□□□□□ -0.54
Rnf41-202ENSMUST00000171342 Rnf123Q5XPI3 1314 aa11.7□□□□□ -0.54
Rnf41-202ENSMUST00000171342 Ythdc1E9Q5K9 736 aaKnown RBP11.7□□□□□ -0.54
Rnf41-202ENSMUST00000171342 Gadd45bP22339 160 aa11.7□□□□□ -0.54
Rnf41-202ENSMUST00000171342 Ddx19aQ61655 478 aaKnown RBP11.7□□□□□ -0.54
Rnf41-202ENSMUST00000171342 Gm45015A0A140LII9 184 aa11.7□□□□□ -0.54
Rnf41-202ENSMUST00000171342 Gm18336A0A140LIU8 765 aa11.7□□□□□ -0.54
Rnf41-202ENSMUST00000171342 Prl7a2O54831 253 aa11.7□□□□□ -0.54
Rnf41-202ENSMUST00000171342 SlkO54988 1233 aa11.7□□□□□ -0.54
Rnf41-202ENSMUST00000171342 Spty2d1Q68FG3 682 aa11.7□□□□□ -0.54
Rnf41-202ENSMUST00000171342 AidaQ8C4Q6 305 aa11.7□□□□□ -0.54
Rnf41-202ENSMUST00000171342 Mrpl50Q8VDT9 159 aaKnown RBP11.7□□□□□ -0.54
Rnf41-202ENSMUST00000171342 Rdm1Q9CQK3 281 aa11.7□□□□□ -0.54
Rnf41-202ENSMUST00000171342 MetP16056 1379 aa11.7□□□□□ -0.54
Rnf41-202ENSMUST00000171342 PtmaP26350 111 aa11.7□□□□□ -0.54
Rnf41-202ENSMUST00000171342 Tmem67Q8BR76 992 aa11.7□□□□□ -0.54
Rnf41-202ENSMUST00000171342 Ciao1Q99KN2 339 aa11.7□□□□□ -0.54
Rnf41-202ENSMUST00000171342 Popdc2Q9ES82 367 aa11.7□□□□□ -0.54
Rnf41-202ENSMUST00000171342 Tbc1d4Q8BYJ6 1307 aa11.69□□□□□ -0.54
Rnf41-202ENSMUST00000171342 Plcb3P51432 1234 aaKnown RBP11.69□□□□□ -0.54
Rnf41-202ENSMUST00000171342 CgnP59242 1191 aa11.69□□□□□ -0.54
Rnf41-202ENSMUST00000171342 Kif20aP97329 887 aa11.69□□□□□ -0.54
Rnf41-202ENSMUST00000171342 Nyap1Q6PFX7 833 aa11.69□□□□□ -0.54
Rnf41-202ENSMUST00000171342 Ubxn10Q8BG34 277 aa11.69□□□□□ -0.54
Rnf41-202ENSMUST00000171342 MypopQ8R4U1 393 aa11.69□□□□□ -0.54
Rnf41-202ENSMUST00000171342 Ccdc7Q9D541 371 aa11.69□□□□□ -0.54
Rnf41-202ENSMUST00000171342 Plekho1Q9JIY0 408 aa11.69□□□□□ -0.54
Rnf41-202ENSMUST00000171342 Ubr2Q6WKZ8 1755 aa11.69□□□□□ -0.54
Rnf41-202ENSMUST00000171342 Nphp3Q7TNH6 1325 aa11.69□□□□□ -0.54
Rnf41-202ENSMUST00000171342 Bms1Q6PGF5 1284 aaKnown RBP11.69□□□□□ -0.54
Rnf41-202ENSMUST00000171342 Trim56Q80VI1 734 aaKnown RBP11.69□□□□□ -0.54
Rnf41-202ENSMUST00000171342 Mb21d2Q8C525 428 aa11.69□□□□□ -0.54
Rnf41-202ENSMUST00000171342 Sugp2Q8CH09 1067 aa11.69□□□□□ -0.54
Rnf41-202ENSMUST00000171342 Sytl4Q9R0Q1 673 aa11.69□□□□□ -0.54
Rnf41-202ENSMUST00000171342 CltaO08585 235 aa11.68□□□□□ -0.54
Rnf41-202ENSMUST00000171342 InhbeO08717 350 aa11.68□□□□□ -0.54
Rnf41-202ENSMUST00000171342 Atp8a2P98200 1148 aa11.68□□□□□ -0.54
Rnf41-202ENSMUST00000171342 Fam102bQ8BQS4 339 aa11.68□□□□□ -0.54
Rnf41-202ENSMUST00000171342 Stox1B2RQL2 990 aa11.68□□□□□ -0.54
Rnf41-202ENSMUST00000171342 Nlrp9aQ66X03 949 aa11.68□□□□□ -0.54
Rnf41-202ENSMUST00000171342 Dmrt2Q8BG36 561 aa11.68□□□□□ -0.54
Rnf41-202ENSMUST00000171342 Ccdc158Q8CDI6 1109 aa11.68□□□□□ -0.54
Rnf41-202ENSMUST00000171342 Pdlim2Q8R1G6 349 aa11.68□□□□□ -0.54
Rnf41-202ENSMUST00000171342 Tmem143Q8VD26 458 aa11.68□□□□□ -0.54
Rnf41-202ENSMUST00000171342 Rbm33Q9CXK9 1231 aaKnown RBP11.68□□□□□ -0.54
Rnf41-202ENSMUST00000171342 CpvlQ9D3S9 478 aa11.68□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms