RNA–Protein interactions for RNA: ENSMUST00000116359.2

Ctc1-202, Transcript of CST complex subunit CTC1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ctc1, Length 3,978 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-202ENSMUST00000116359 Atp7bQ64446 1462 aa11.85□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Zrsr2Q62377 462 aaKnown RBP11.85□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Cfap100Q80VN0 613 aa11.85□□□□□ -0.51
Ctc1-202ENSMUST00000116359 1700113H08RikE9Q9Q5 327 aa11.85□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Ncoa7Q6DFV7 943 aa11.85□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Dhx40Q6PE54 779 aaKnown RBP11.85□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Slc12a5Q91V14 1138 aa11.85□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Pcdhb15Q91Y04 786 aa11.85□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Brms1Q99N20 246 aa11.85□□□□□ -0.51
Ctc1-202ENSMUST00000116359 AvenQ9D9K3 342 aa11.85□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Lig3P97386 1015 aa11.85□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Puf60Q3UEB3 564 aaKnown RBP11.85□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Topaz1E5FYH1 1653 aa11.84□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Abcb6Q9DC29 842 aa11.84□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Krt85Q9Z2T6 507 aa11.84□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Ehbp1l1Q99MS7 1716 aa11.84□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Ankrd35E9Q9D8 996 aa11.84□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Tti2Q8BGV4 512 aa11.84□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Zfp113Q8C689 439 aa11.84□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Zfp446Q8C9M8 523 aa11.84□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Cep63Q3UPP8 700 aa11.84□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Ccdc114Q3UX62 658 aa11.84□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Plcd1Q8R3B1 756 aa11.84□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Smc1bQ920F6 1248 aa11.84□□□□□ -0.51
Ctc1-202ENSMUST00000116359 Rad50P70388 1312 aa11.83□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Robo2Q7TPD3 1470 aa11.83□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Stx1aO35526 288 aa11.83□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Nek5Q7TSC3 627 aa11.83□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Synpo2Q91YE8 1087 aaKnown RBP11.83□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Q9CYI0 393 aa11.83□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Slc5a4aQ9ET37 656 aa11.83□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Mcm5P49718 733 aa11.83□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Cavin2Q63918 418 aaKnown RBP11.83□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Nyap1Q6PFX7 833 aa11.83□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Epc1Q8C9X6 813 aa11.83□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Dydc1Q9D9T0 175 aa11.83□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Nfu1Q9QZ23 255 aa11.83□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Eif2ak3Q9Z2B5 1114 aa11.83□□□□□ -0.52
Ctc1-202ENSMUST00000116359 1700019A02RikA0A087WPV9 146 aa11.83□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Tpx2A2APB8 745 aaKnown RBP11.83□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Zranb1Q7M760 708 aa11.83□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Hook1Q8BIL5 728 aa11.83□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Myo5cE9Q1F5 1742 aa11.83□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Atp8b3Q6UQ17 1335 aa11.82□□□□□ -0.52
Ctc1-202ENSMUST00000116359 1700006A11RikB9EHI3 544 aa11.82□□□□□ -0.52
Ctc1-202ENSMUST00000116359 CalrP14211 416 aaKnown RBP11.82□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Irf6P97431 467 aa11.82□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Ubxn4Q8VCH8 506 aa11.82□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Arl8aQ8VEH3 186 aa11.82□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Xpo4Q9ESJ0 1151 aa11.82□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Rims2Q9EQZ7 1530 aa11.82□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Hspa4Q61316 841 aa11.82□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Drc7Q6V3W6 876 aa11.82□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Trerf1Q8BXJ2 1205 aa11.82□□□□□ -0.52
Ctc1-202ENSMUST00000116359 CrebrfQ8CDG5 640 aaKnown RBP11.82□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Golph3lQ8R088 285 aaKnown RBP11.82□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Nphp1Q9QY53 687 aa11.82□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Qtrt2B8ZXI1 415 aa11.82□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Clec11aO88200 328 aa11.82□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Ccdc40Q8BI79 1192 aa11.82□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Tmem87aQ8BXN9 555 aa11.82□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Slain2Q8CI08 581 aa11.82□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Eif3cQ8R1B4 911 aaKnown RBP11.82□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Magi2Q9WVQ1 1275 aa11.82□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Letm1Q9Z2I0 738 aa11.82□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Rgs12Q8CGE9 1381 aa11.81□□□□□ -0.52
Ctc1-202ENSMUST00000116359 A0A1L1SQF0 893 aa11.81□□□□□ -0.52
Ctc1-202ENSMUST00000116359 MicalclQ9D5U9 680 aa11.81□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Tpcn1Q9EQJ0 817 aa11.81□□□□□ -0.52
Ctc1-202ENSMUST00000116359 CemipQ8BI06 1361 aa11.81□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Ubash3aQ3V3E1 624 aa11.81□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Ddx49Q4FZF3 480 aaKnown RBP11.81□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Unc5clQ6R653 518 aa11.81□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Srgap3Q812A2 1099 aa11.81□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Prkag3Q8BGM7 489 aa11.81□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Q8BZJ8 459 aa11.81□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Bicdl2Q8CHW5 507 aa11.81□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Fut8Q9WTS2 575 aa11.81□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Cdca7lQ922M5 438 aa11.81□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Tmem94Q7TSH8 1360 aa11.8□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Atp1a2Q6PIE5 1020 aa11.8□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Q9D9S1 216 aa11.8□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Nphp3Q7TNH6 1325 aa11.8□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Exoc8Q6PGF7 716 aa11.8□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Mrpl50Q8VDT9 159 aaKnown RBP11.8□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Rsrc2A2RTL5 376 aaKnown RBP11.8□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Pkp1P97350 728 aaKnown RBP11.8□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Fchsd2Q3USJ8 740 aa11.8□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Ino80Q6ZPV2 1559 aa11.8□□□□□ -0.52
Ctc1-202ENSMUST00000116359 XpcP51612 930 aa11.79□□□□□ -0.52
Ctc1-202ENSMUST00000116359 LarsQ8BMJ2 1178 aa11.79□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Tubb4aQ9D6F9 444 aa11.79□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Exosc9Q9JHI7 438 aaKnown RBP11.79□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Ccdc33Q3ULW6 985 aa11.79□□□□□ -0.52
Ctc1-202ENSMUST00000116359 E2f4Q8R0K9 410 aa11.79□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Ppp1r42Q8R1Z4 357 aa11.79□□□□□ -0.52
Ctc1-202ENSMUST00000116359 SarnpQ9D1J3 210 aaKnown RBP11.79□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Bcl9Q9D219 1425 aa11.79□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Pibf1E9Q6K3 756 aa11.79□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Hnrnph1O35737 449 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 23 ms