RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 NpcdF8VQB8 469 aa15.31■□□□□ 0.04
Trim50-202ENSMUST00000111180 Hsp90ab1P11499 724 aaKnown RBP15.31■□□□□ 0.04
Trim50-202ENSMUST00000111180 Atp6v0a2P15920 856 aa15.31■□□□□ 0.04
Trim50-202ENSMUST00000111180 Mcm2P97310 904 aa15.31■□□□□ 0.04
Trim50-202ENSMUST00000111180 Ccdc27Q3V036 639 aa15.31■□□□□ 0.04
Trim50-202ENSMUST00000111180 Usp48Q3V0C5 1052 aa15.31■□□□□ 0.04
Trim50-202ENSMUST00000111180 Nlrp9bQ66X22 1003 aa15.31■□□□□ 0.04
Trim50-202ENSMUST00000111180 NexnQ7TPW1 607 aa15.31■□□□□ 0.04
Trim50-202ENSMUST00000111180 Upf1Q9EPU0 1124 aaKnown RBP15.31■□□□□ 0.04
Trim50-202ENSMUST00000111180 Ppp2r3aB2RXC8 1150 aa15.3■□□□□ 0.04
Trim50-202ENSMUST00000111180 Brd1E9PZ26 1189 aaKnown RBP15.3■□□□□ 0.04
Trim50-202ENSMUST00000111180 Thrap3Q569Z6 951 aaKnown RBP15.3■□□□□ 0.04
Trim50-202ENSMUST00000111180 Slc4a10Q5DTL9 1118 aa15.3■□□□□ 0.04
Trim50-202ENSMUST00000111180 Rbm17Q8JZX4 405 aaKnown RBP15.3■□□□□ 0.04
Trim50-202ENSMUST00000111180 Dbr1Q923B1 550 aa15.3■□□□□ 0.04
Trim50-202ENSMUST00000111180 Greb1lB9EJV3 1913 aa15.3■□□□□ 0.04
Trim50-202ENSMUST00000111180 Golgb1E9PVZ8 3238 aa15.29■□□□□ 0.04
Trim50-202ENSMUST00000111180 Atxn2lQ7TQH0 1049 aaKnown RBP15.29■□□□□ 0.04
Trim50-202ENSMUST00000111180 Mcmdc2E9Q956 681 aa15.28■□□□□ 0.04
Trim50-202ENSMUST00000111180 GpkowQ56A08 488 aa15.28■□□□□ 0.04
Trim50-202ENSMUST00000111180 Tmem87bQ8BKU8 555 aa15.28■□□□□ 0.04
Trim50-202ENSMUST00000111180 Podxl2Q8CAE9 603 aa15.28■□□□□ 0.04
Trim50-202ENSMUST00000111180 Phlpp2Q8BXA7 1320 aa15.28■□□□□ 0.04
Trim50-202ENSMUST00000111180 Kiaa0232Q80U59 1396 aaKnown RBP15.28■□□□□ 0.04
Trim50-202ENSMUST00000111180 Nolc1E9Q5C9 702 aaKnown RBP15.27■□□□□ 0.04
Trim50-202ENSMUST00000111180 Tgfb1i1Q62219 461 aa15.27■□□□□ 0.04
Trim50-202ENSMUST00000111180 KnstrnQ9D9Z1 312 aaKnown RBP15.27■□□□□ 0.04
Trim50-202ENSMUST00000111180 Sh3tc1G3X9F6 1346 aa15.27■□□□□ 0.04
Trim50-202ENSMUST00000111180 Flt1P35969 1333 aa15.27■□□□□ 0.04
Trim50-202ENSMUST00000111180 PnnO35691 725 aaKnown RBP15.27■□□□□ 0.03
Trim50-202ENSMUST00000111180 Csf1rP09581 977 aa15.27■□□□□ 0.03
Trim50-202ENSMUST00000111180 Plcb3P51432 1234 aaKnown RBP15.27■□□□□ 0.03
Trim50-202ENSMUST00000111180 Glg1Q61543 1175 aaKnown RBP15.27■□□□□ 0.03
Trim50-202ENSMUST00000111180 Cyp2ab1S4R196 498 aa15.27■□□□□ 0.03
Trim50-202ENSMUST00000111180 Abcc4E9Q236 1325 aa15.26■□□□□ 0.03
Trim50-202ENSMUST00000111180 Duox1A2AQ92 1551 aa15.26■□□□□ 0.03
Trim50-202ENSMUST00000111180 Myh1Q5SX40 1942 aa15.26■□□□□ 0.03
Trim50-202ENSMUST00000111180 Gm7347D3YYI9 267 aa15.26■□□□□ 0.03
Trim50-202ENSMUST00000111180 Speer4aF8VPX6 267 aa15.26■□□□□ 0.03
Trim50-202ENSMUST00000111180 Igflr1Q3U4N7 345 aa15.26■□□□□ 0.03
Trim50-202ENSMUST00000111180 FanclQ9CR14 375 aa15.26■□□□□ 0.03
Trim50-202ENSMUST00000111180 Atg4a-psA0A0G2JFS9 396 aa15.25■□□□□ 0.03
Trim50-202ENSMUST00000111180 Nol10Q5RJG1 687 aaKnown RBP15.25■□□□□ 0.03
Trim50-202ENSMUST00000111180 Rbm27Q5SFM8 1060 aaKnown RBP15.25■□□□□ 0.03
Trim50-202ENSMUST00000111180 Gpr101Q80T62 511 aa15.25■□□□□ 0.03
Trim50-202ENSMUST00000111180 Clca2Q8BG22 942 aa15.25■□□□□ 0.03
Trim50-202ENSMUST00000111180 Atg4aQ8C9S8 396 aa15.25■□□□□ 0.03
Trim50-202ENSMUST00000111180 Ttc19Q8CC21 365 aa15.25■□□□□ 0.03
Trim50-202ENSMUST00000111180 Kif18aQ91WD7 886 aa15.25■□□□□ 0.03
Trim50-202ENSMUST00000111180 Prl3d2F6R3P9 224 aa15.24■□□□□ 0.03
Trim50-202ENSMUST00000111180 GptQ8QZR5 496 aa15.24■□□□□ 0.03
Trim50-202ENSMUST00000111180 WaslQ91YD9 501 aa15.24■□□□□ 0.03
Trim50-202ENSMUST00000111180 Col24a1Q30D77 1733 aa15.23■□□□□ 0.03
Trim50-202ENSMUST00000111180 Zfp646Q6NV66 1788 aa15.23■□□□□ 0.03
Trim50-202ENSMUST00000111180 Cyp19a1P28649 503 aa15.23■□□□□ 0.03
Trim50-202ENSMUST00000111180 CanxP35564 591 aaKnown RBP15.23■□□□□ 0.03
Trim50-202ENSMUST00000111180 Rbm46P86049 533 aa15.23■□□□□ 0.03
Trim50-202ENSMUST00000111180 SobpQ0P5V2 864 aa15.23■□□□□ 0.03
Trim50-202ENSMUST00000111180 Map3k9Q3U1V8 1077 aa15.23■□□□□ 0.03
Trim50-202ENSMUST00000111180 Vil1Q62468 827 aa15.23■□□□□ 0.03
Trim50-202ENSMUST00000111180 Rasgrp4Q8BTM9 673 aa15.23■□□□□ 0.03
Trim50-202ENSMUST00000111180 Gja10Q9WUS4 505 aa15.23■□□□□ 0.03
Trim50-202ENSMUST00000111180 Cyp46a1Q9WVK8 500 aa15.23■□□□□ 0.03
Trim50-202ENSMUST00000111180 Aknad1E9Q8N6 675 aa15.22■□□□□ 0.03
Trim50-202ENSMUST00000111180 Ccdc146E9Q9F7 977 aa15.22■□□□□ 0.03
Trim50-202ENSMUST00000111180 Trim34bJ3QNR8 485 aa15.22■□□□□ 0.03
Trim50-202ENSMUST00000111180 CenpbP27790 599 aa15.22■□□□□ 0.03
Trim50-202ENSMUST00000111180 Psd3Q2PFD7 1037 aa15.22■□□□□ 0.03
Trim50-202ENSMUST00000111180 EappQ5BU09 281 aa15.22■□□□□ 0.03
Trim50-202ENSMUST00000111180 Stxbp5lQ5DQR4 1185 aa15.22■□□□□ 0.03
Trim50-202ENSMUST00000111180 Adora1Q60612 326 aa15.22■□□□□ 0.03
Trim50-202ENSMUST00000111180 Socs7Q8VHQ2 579 aa15.22■□□□□ 0.03
Trim50-202ENSMUST00000111180 Smarca5Q91ZW3 1051 aaKnown RBP15.22■□□□□ 0.03
Trim50-202ENSMUST00000111180 Mybbp1aQ7TPV4 1344 aaKnown RBP15.22■□□□□ 0.03
Trim50-202ENSMUST00000111180 Mtcl1Q3UHU5 1945 aa15.22■□□□□ 0.03
Trim50-202ENSMUST00000111180 Cops6O88545 324 aa15.21■□□□□ 0.03
Trim50-202ENSMUST00000111180 Cyp7a1Q64505 503 aa15.21■□□□□ 0.03
Trim50-202ENSMUST00000111180 Glis2Q8VDL9 521 aa15.21■□□□□ 0.03
Trim50-202ENSMUST00000111180 Zbtb3Q91X45 518 aa15.21■□□□□ 0.03
Trim50-202ENSMUST00000111180 Rtn4Q99P72 1162 aaKnown RBP15.21■□□□□ 0.03
Trim50-202ENSMUST00000111180 Ttc14Q9CSP9 761 aa15.21■□□□□ 0.03
Trim50-202ENSMUST00000111180 Foxo4Q9WVH3 505 aa15.21■□□□□ 0.03
Trim50-202ENSMUST00000111180 Col5a2Q3U962 1497 aa15.21■□□□□ 0.02
Trim50-202ENSMUST00000111180 Prl3d3A0A0M6L0J6 224 aa15.2■□□□□ 0.02
Trim50-202ENSMUST00000111180 Wdr63B2RY71 923 aa15.2■□□□□ 0.02
Trim50-202ENSMUST00000111180 Pa2g4P50580 394 aaKnown RBP15.2■□□□□ 0.02
Trim50-202ENSMUST00000111180 BcanQ61361 883 aa15.2■□□□□ 0.02
Trim50-202ENSMUST00000111180 Ppp4r3aQ6P2K6 820 aa15.2■□□□□ 0.02
Trim50-202ENSMUST00000111180 Q8C5K5 320 aa15.2■□□□□ 0.02
Trim50-202ENSMUST00000111180 Plcd4Q8K3R3 807 aa15.2■□□□□ 0.02
Trim50-202ENSMUST00000111180 Dcdc2bF7BCK0 340 aa15.2■□□□□ 0.02
Trim50-202ENSMUST00000111180 Chrna5Q2MKA5 467 aa15.2■□□□□ 0.02
Trim50-202ENSMUST00000111180 Zbtb38Q3LR78 1197 aa15.2■□□□□ 0.02
Trim50-202ENSMUST00000111180 Zc3h15Q3TIV5 426 aaKnown RBP15.2■□□□□ 0.02
Trim50-202ENSMUST00000111180 1700123L14RikQ3V2K7 440 aa15.2■□□□□ 0.02
Trim50-202ENSMUST00000111180 VwdeQ6DFV8 926 aa15.2■□□□□ 0.02
Trim50-202ENSMUST00000111180 Zfp831A2ADM8 1628 aa15.19■□□□□ 0.02
Trim50-202ENSMUST00000111180 Setdb1O88974 1307 aa15.19■□□□□ 0.02
Trim50-202ENSMUST00000111180 Kdm3aQ6PCM1 1323 aa15.19■□□□□ 0.02
Trim50-202ENSMUST00000111180 Glt1d1A4FUP9 346 aa15.19■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms