RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 Olfr247E9PVJ7 320 aa37.72■■■■□ 3.63
Ctdnep1-201ENSMUST00000108593 Olfr819K7N727 320 aa37.72■■■■□ 3.63
Ctdnep1-201ENSMUST00000108593 Cd248Q91V98 765 aa37.72■■■■□ 3.63
Ctdnep1-201ENSMUST00000108593 Rnaseh2aQ9CWY8 301 aa37.72■■■■□ 3.63
Ctdnep1-201ENSMUST00000108593 Popdc2Q9ES82 367 aa37.72■■■■□ 3.63
Ctdnep1-201ENSMUST00000108593 Anxa1P10107 346 aaKnown RBP37.72■■■■□ 3.63
Ctdnep1-201ENSMUST00000108593 Trim27Q62158 513 aa37.72■■■■□ 3.63
Ctdnep1-201ENSMUST00000108593 TrhQ62361 256 aa37.72■■■■□ 3.63
Ctdnep1-201ENSMUST00000108593 Ncoa5Q91W39 579 aaKnown RBP37.72■■■■□ 3.63
Ctdnep1-201ENSMUST00000108593 Ciao1Q99KN2 339 aa37.72■■■■□ 3.63
Ctdnep1-201ENSMUST00000108593 Rlbp1Q9Z275 317 aa37.72■■■■□ 3.63
Ctdnep1-201ENSMUST00000108593 Nedd4P46935 887 aaKnown RBP37.71■■■■□ 3.63
Ctdnep1-201ENSMUST00000108593 Calr4Q3TQS0 420 aa37.71■■■■□ 3.63
Ctdnep1-201ENSMUST00000108593 Nup188Q6ZQH8 1759 aa37.7■■■■□ 3.63
Ctdnep1-201ENSMUST00000108593 Brpf1B2RRD7 1212 aa37.7■■■■□ 3.63
Ctdnep1-201ENSMUST00000108593 Atg9aQ68FE2 551 aa37.7■■■■□ 3.63
Ctdnep1-201ENSMUST00000108593 Dhx38Q80X98 1228 aa37.7■■■■□ 3.63
Ctdnep1-201ENSMUST00000108593 LratQ9JI60 231 aa37.7■■■■□ 3.63
Ctdnep1-201ENSMUST00000108593 Col3a1P08121 1464 aa37.7■■■■□ 3.63
Ctdnep1-201ENSMUST00000108593 Tmem143Q8VD26 458 aa37.69■■■■□ 3.62
Ctdnep1-201ENSMUST00000108593 Ttc5Q99LG4 440 aa37.69■■■■□ 3.62
Ctdnep1-201ENSMUST00000108593 Cluap1Q8R3P7 413 aa37.69■■■■□ 3.62
Ctdnep1-201ENSMUST00000108593 CpvlQ9D3S9 478 aa37.69■■■■□ 3.62
Ctdnep1-201ENSMUST00000108593 Mcmdc2E9Q956 681 aa37.68■■■■□ 3.62
Ctdnep1-201ENSMUST00000108593 NfixP70257 488 aa37.68■■■■□ 3.62
Ctdnep1-201ENSMUST00000108593 Atp8a2P98200 1148 aa37.68■■■■□ 3.62
Ctdnep1-201ENSMUST00000108593 HlfQ8BW74 295 aa37.68■■■■□ 3.62
Ctdnep1-201ENSMUST00000108593 Zbtb3Q91X45 518 aa37.68■■■■□ 3.62
Ctdnep1-201ENSMUST00000108593 Ppp4r3aQ6P2K6 820 aa37.66■■■■□ 3.62
Ctdnep1-201ENSMUST00000108593 Klrk1O54709 232 aa37.65■■■■□ 3.62
Ctdnep1-201ENSMUST00000108593 Il15P48346 162 aa37.65■■■■□ 3.62
Ctdnep1-201ENSMUST00000108593 Plbd2Q3TCN2 594 aa37.65■■■■□ 3.62
Ctdnep1-201ENSMUST00000108593 Znf496Q5SXI5 585 aa37.65■■■■□ 3.62
Ctdnep1-201ENSMUST00000108593 SnrkQ8VDU5 748 aa37.65■■■■□ 3.62
Ctdnep1-201ENSMUST00000108593 Abcc4E9Q236 1325 aa37.65■■■■□ 3.62
Ctdnep1-201ENSMUST00000108593 AU019823E9PUQ3 292 aa37.65■■■■□ 3.62
Ctdnep1-201ENSMUST00000108593 Celf1P28659 486 aaKnown RBP37.65■■■■□ 3.62
Ctdnep1-201ENSMUST00000108593 FktnQ8R507 461 aa37.65■■■■□ 3.62
Ctdnep1-201ENSMUST00000108593 Slfn1Q9Z0I7 337 aa37.65■■■■□ 3.62
Ctdnep1-201ENSMUST00000108593 Tmc2Q8R4P4 888 aa37.64■■■■□ 3.62
Ctdnep1-201ENSMUST00000108593 Mtcl1Q3UHU5 1945 aa37.64■■■■□ 3.62
Ctdnep1-201ENSMUST00000108593 Fbxo3Q9DC63 480 aa37.63■■■■□ 3.61
Ctdnep1-201ENSMUST00000108593 IntuQ059U7 942 aa37.62■■■■□ 3.61
Ctdnep1-201ENSMUST00000108593 Best3Q6H1V1 669 aa37.62■■■■□ 3.61
Ctdnep1-201ENSMUST00000108593 Zkscan8Q8BSL0 588 aa37.62■■■■□ 3.61
Ctdnep1-201ENSMUST00000108593 Dis3l2Q8CI75 870 aaKnown RBP37.62■■■■□ 3.61
Ctdnep1-201ENSMUST00000108593 Rrs1Q9CYH6 365 aaKnown RBP37.62■■■■□ 3.61
Ctdnep1-201ENSMUST00000108593 Ets1P27577 440 aa37.61■■■■□ 3.61
Ctdnep1-201ENSMUST00000108593 Bend4P86174 541 aa37.61■■■■□ 3.61
Ctdnep1-201ENSMUST00000108593 Nlrp1aQ2LKU9 1182 aa37.61■■■■□ 3.61
Ctdnep1-201ENSMUST00000108593 Insm1Q63ZV0 521 aa37.61■■■■□ 3.61
Ctdnep1-201ENSMUST00000108593 Kdm3aQ6PCM1 1323 aa37.6■■■■□ 3.61
Ctdnep1-201ENSMUST00000108593 ArsiQ32KI9 573 aa37.6■■■■□ 3.61
Ctdnep1-201ENSMUST00000108593 B4galnt4Q766D5 1034 aa37.6■■■■□ 3.61
Ctdnep1-201ENSMUST00000108593 Ptcd1Q8C2E4 695 aaKnown RBP37.6■■■■□ 3.61
Ctdnep1-201ENSMUST00000108593 Sh3bp5Q9Z131 463 aa37.6■■■■□ 3.61
Ctdnep1-201ENSMUST00000108593 Plekhf1Q3TB82 279 aa37.59■■■■□ 3.61
Ctdnep1-201ENSMUST00000108593 Hs1bp3Q3TC93 395 aa37.59■■■■□ 3.61
Ctdnep1-201ENSMUST00000108593 Ptf1aQ9QX98 324 aa37.59■■■■□ 3.61
Ctdnep1-201ENSMUST00000108593 Pde8bE9Q4S1 865 aa37.58■■■■□ 3.61
Ctdnep1-201ENSMUST00000108593 Rab3gap1Q80UJ7 981 aa37.58■■■■□ 3.61
Ctdnep1-201ENSMUST00000108593 D830030K20RikE9PYQ5 218 aa37.56■■■■□ 3.6
Ctdnep1-201ENSMUST00000108593 Gm3043K7N693 218 aa37.56■■■■□ 3.6
Ctdnep1-201ENSMUST00000108593 Gm16440K7N6G6 218 aa37.56■■■■□ 3.6
Ctdnep1-201ENSMUST00000108593 Gm2244L7N2A3 218 aa37.56■■■■□ 3.6
Ctdnep1-201ENSMUST00000108593 Gm3278L7N2D2 218 aa37.56■■■■□ 3.6
Ctdnep1-201ENSMUST00000108593 Gm8271L7N2E2 218 aa37.56■■■■□ 3.6
Ctdnep1-201ENSMUST00000108593 GabrdP22933 449 aa37.56■■■■□ 3.6
Ctdnep1-201ENSMUST00000108593 Wwc1Q5SXA9 1104 aa37.56■■■■□ 3.6
Ctdnep1-201ENSMUST00000108593 Unc5clQ6R653 518 aa37.56■■■■□ 3.6
Ctdnep1-201ENSMUST00000108593 Sgip1Q8VD37 806 aa37.55■■■■□ 3.6
Ctdnep1-201ENSMUST00000108593 Spire2Q8K1S6 718 aa37.54■■■■□ 3.6
Ctdnep1-201ENSMUST00000108593 Armcx1Q9CX83 456 aa37.54■■■■□ 3.6
Ctdnep1-201ENSMUST00000108593 Pde3aQ9Z0X4 1141 aa37.54■■■■□ 3.6
Ctdnep1-201ENSMUST00000108593 Tpx2A2APB8 745 aaKnown RBP37.54■■■■□ 3.6
Ctdnep1-201ENSMUST00000108593 Kcna3P16390 528 aa37.54■■■■□ 3.6
Ctdnep1-201ENSMUST00000108593 Edc3Q8K2D3 508 aaKnown RBP37.54■■■■□ 3.6
Ctdnep1-201ENSMUST00000108593 Csf1rP09581 977 aa37.53■■■■□ 3.6
Ctdnep1-201ENSMUST00000108593 NfkbibQ60778 359 aa37.53■■■■□ 3.6
Ctdnep1-201ENSMUST00000108593 Slc14a2Q8R4T9 930 aa37.52■■■■□ 3.6
Ctdnep1-201ENSMUST00000108593 Gdf11Q9Z1W4 405 aa37.52■■■■□ 3.6
Ctdnep1-201ENSMUST00000108593 Phrf1A6H619 1682 aa37.52■■■■□ 3.6
Ctdnep1-201ENSMUST00000108593 Gsdma2Q32M21 443 aa37.51■■■■□ 3.6
Ctdnep1-201ENSMUST00000108593 Flt1P35969 1333 aa37.51■■■■□ 3.6
Ctdnep1-201ENSMUST00000108593 Col5a2Q3U962 1497 aa37.51■■■■□ 3.59
Ctdnep1-201ENSMUST00000108593 Cfap44E9Q5M6 1843 aa37.5■■■■□ 3.59
Ctdnep1-201ENSMUST00000108593 Neurod6P48986 337 aa37.5■■■■□ 3.59
Ctdnep1-201ENSMUST00000108593 Fam102bQ8BQS4 339 aa37.5■■■■□ 3.59
Ctdnep1-201ENSMUST00000108593 CarsQ9ER72 831 aaKnown RBP37.5■■■■□ 3.59
Ctdnep1-201ENSMUST00000108593 Vsig10D3YX43 558 aa37.5■■■■□ 3.59
Ctdnep1-201ENSMUST00000108593 Atp6v1aP50516 617 aaKnown RBP37.5■■■■□ 3.59
Ctdnep1-201ENSMUST00000108593 Chrna5Q2MKA5 467 aa37.5■■■■□ 3.59
Ctdnep1-201ENSMUST00000108593 EvplQ9D952 2035 aa37.5■■■■□ 3.59
Ctdnep1-201ENSMUST00000108593 Speer4dL7N216 212 aa37.49■■■■□ 3.59
Ctdnep1-201ENSMUST00000108593 Dpf2Q61103 391 aaKnown RBP37.49■■■■□ 3.59
Ctdnep1-201ENSMUST00000108593 FanclQ9CR14 375 aa37.49■■■■□ 3.59
Ctdnep1-201ENSMUST00000108593 Myoz2Q9JJW5 264 aa37.49■■■■□ 3.59
Ctdnep1-201ENSMUST00000108593 Btaf1E9QAE3 1848 aa37.47■■■■□ 3.59
Ctdnep1-201ENSMUST00000108593 SkilQ60665 675 aa37.47■■■■□ 3.59
Ctdnep1-201ENSMUST00000108593 Osbpl5Q9ER64 874 aa37.47■■■■□ 3.59
Retrieved 100 of 22,080 RNA–protein pairs in 30.5 ms