RNA–Protein interactions for RNA: ENSMUST00000107934.1

Shank1-201, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shank1, Length 6,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-201ENSMUST00000107934 Spocd1B1ASB6 936 aa17.93■□□□□ 0.46
Shank1-201ENSMUST00000107934 Psmd1Q3TXS7 953 aa17.93■□□□□ 0.46
Shank1-201ENSMUST00000107934 Ankrd40Q5SUE8 363 aa17.93■□□□□ 0.46
Shank1-201ENSMUST00000107934 Dnajc5bQ9CQ94 199 aa17.93■□□□□ 0.46
Shank1-201ENSMUST00000107934 AdnpQ9Z103 1108 aaKnown RBP17.93■□□□□ 0.46
Shank1-201ENSMUST00000107934 Sun3Q5SS91 320 aa17.93■□□□□ 0.46
Shank1-201ENSMUST00000107934 Rad50P70388 1312 aa17.93■□□□□ 0.46
Shank1-201ENSMUST00000107934 Exoc8Q6PGF7 716 aa17.92■□□□□ 0.46
Shank1-201ENSMUST00000107934 Zkscan7E9PVW1 718 aa17.92■□□□□ 0.46
Shank1-201ENSMUST00000107934 Slc4a8Q8JZR6 1089 aa17.92■□□□□ 0.46
Shank1-201ENSMUST00000107934 Pik3ap1Q9EQ32 811 aa17.92■□□□□ 0.46
Shank1-201ENSMUST00000107934 Znf518aB2RRF6 1478 aaKnown RBP17.92■□□□□ 0.46
Shank1-201ENSMUST00000107934 NcapgE9PWG6 1004 aa17.92■□□□□ 0.46
Shank1-201ENSMUST00000107934 Myl3P09542 204 aa17.92■□□□□ 0.46
Shank1-201ENSMUST00000107934 Ift122Q6NWV3 1182 aa17.92■□□□□ 0.46
Shank1-201ENSMUST00000107934 Noc2lQ9WV70 747 aaKnown RBP17.92■□□□□ 0.46
Shank1-201ENSMUST00000107934 RtcbQ99LF4 505 aaKnown RBP17.92■□□□□ 0.46
Shank1-201ENSMUST00000107934 Rdm1Q9CQK3 281 aa17.92■□□□□ 0.46
Shank1-201ENSMUST00000107934 PxdnQ3UQ28 1475 aa17.91■□□□□ 0.46
Shank1-201ENSMUST00000107934 Calm1P0DP26 149 aaKnown RBP17.91■□□□□ 0.46
Shank1-201ENSMUST00000107934 Calm2P0DP27 149 aaKnown RBP17.91■□□□□ 0.46
Shank1-201ENSMUST00000107934 Calm3P0DP28 149 aaKnown RBP17.91■□□□□ 0.46
Shank1-201ENSMUST00000107934 Smarcc2Q6PDG5 1213 aa17.91■□□□□ 0.46
Shank1-201ENSMUST00000107934 Naa15Q80UM3 865 aaKnown RBP17.91■□□□□ 0.46
Shank1-201ENSMUST00000107934 Prpf40aQ9R1C7 953 aaKnown RBP17.91■□□□□ 0.46
Shank1-201ENSMUST00000107934 Ssh2Q5SW75 1423 aa17.91■□□□□ 0.46
Shank1-201ENSMUST00000107934 Atp8b3Q6UQ17 1335 aa17.91■□□□□ 0.46
Shank1-201ENSMUST00000107934 Ca8P28651 291 aa17.91■□□□□ 0.46
Shank1-201ENSMUST00000107934 Snx25Q3ZT31 840 aa17.91■□□□□ 0.46
Shank1-201ENSMUST00000107934 Snw1Q9CSN1 536 aaKnown RBP17.91■□□□□ 0.46
Shank1-201ENSMUST00000107934 4931400O07RikQ9D4M5 137 aa17.91■□□□□ 0.46
Shank1-201ENSMUST00000107934 Mcmdc2E9Q956 681 aa17.91■□□□□ 0.46
Shank1-201ENSMUST00000107934 LifrP42703 1092 aa17.91■□□□□ 0.46
Shank1-201ENSMUST00000107934 ThemisQ8BGW0 636 aa17.91■□□□□ 0.46
Shank1-201ENSMUST00000107934 Hsf2bpQ9D4G2 338 aa17.91■□□□□ 0.46
Shank1-201ENSMUST00000107934 Ccdc112A0AUP1 442 aa17.9■□□□□ 0.46
Shank1-201ENSMUST00000107934 Usp25P57080 1055 aa17.9■□□□□ 0.46
Shank1-201ENSMUST00000107934 Ccdc83Q9D4V3 305 aa17.9■□□□□ 0.46
Shank1-201ENSMUST00000107934 Mmel1Q9JLI3 765 aa17.9■□□□□ 0.46
Shank1-201ENSMUST00000107934 ParnQ8VDG3 624 aa17.9■□□□□ 0.46
Shank1-201ENSMUST00000107934 Bicc1Q99MQ1 977 aaKnown RBP17.9■□□□□ 0.46
Shank1-201ENSMUST00000107934 Neurog2P70447 263 aa17.9■□□□□ 0.46
Shank1-201ENSMUST00000107934 GnaqP21279 359 aa17.9■□□□□ 0.46
Shank1-201ENSMUST00000107934 P4ha1Q60715 534 aa17.9■□□□□ 0.46
Shank1-201ENSMUST00000107934 Gtf2a1Q99PM3 378 aa17.9■□□□□ 0.46
Shank1-201ENSMUST00000107934 Abtb2Q7TQI7 1024 aa17.89■□□□□ 0.45
Shank1-201ENSMUST00000107934 CalrP14211 416 aaKnown RBP17.89■□□□□ 0.45
Shank1-201ENSMUST00000107934 DesP31001 469 aaKnown RBP17.89■□□□□ 0.45
Shank1-201ENSMUST00000107934 Eme2Q56A04 373 aa17.89■□□□□ 0.45
Shank1-201ENSMUST00000107934 Kiaa1211Q5PR69 1207 aa17.89■□□□□ 0.45
Shank1-201ENSMUST00000107934 Pde3aQ9Z0X4 1141 aa17.89■□□□□ 0.45
Shank1-201ENSMUST00000107934 MarcksP26645 309 aaKnown RBP17.89■□□□□ 0.45
Shank1-201ENSMUST00000107934 Pdia3P27773 505 aaKnown RBP17.89■□□□□ 0.45
Shank1-201ENSMUST00000107934 Gnat2P50149 354 aa17.89■□□□□ 0.45
Shank1-201ENSMUST00000107934 Dact3Q0PHV7 610 aa17.89■□□□□ 0.45
Shank1-201ENSMUST00000107934 Pram1Q6BCL1 675 aa17.89■□□□□ 0.45
Shank1-201ENSMUST00000107934 Msl1Q6PDM1 616 aa17.89■□□□□ 0.45
Shank1-201ENSMUST00000107934 Cyp4f39Q8BGU0 532 aa17.89■□□□□ 0.45
Shank1-201ENSMUST00000107934 Akap2O54931 893 aa17.89■□□□□ 0.45
Shank1-201ENSMUST00000107934 CalcaP70160 136 aa17.89■□□□□ 0.45
Shank1-201ENSMUST00000107934 Krt15Q61414 452 aa17.89■□□□□ 0.45
Shank1-201ENSMUST00000107934 Sbno1Q689Z5 1390 aa17.88■□□□□ 0.45
Shank1-201ENSMUST00000107934 Hoxc9P09633 260 aa17.88■□□□□ 0.45
Shank1-201ENSMUST00000107934 Ppp1r10Q80W00 888 aaKnown RBP17.88■□□□□ 0.45
Shank1-201ENSMUST00000107934 Irs4Q9Z0Y7 1216 aa17.88■□□□□ 0.45
Shank1-201ENSMUST00000107934 Tekt3Q6X6Z7 490 aa17.88■□□□□ 0.45
Shank1-201ENSMUST00000107934 LarsQ8BMJ2 1178 aa17.88■□□□□ 0.45
Shank1-201ENSMUST00000107934 Ccdc73Q8CDM4 1066 aa17.88■□□□□ 0.45
Shank1-201ENSMUST00000107934 CenppQ9CZ92 286 aa17.88■□□□□ 0.45
Shank1-201ENSMUST00000107934 Ccdc93Q7TQK5 629 aa17.88■□□□□ 0.45
Shank1-201ENSMUST00000107934 Rtn1Q8K0T0 780 aa17.88■□□□□ 0.45
Shank1-201ENSMUST00000107934 Slx4ipQ9D7Y9 413 aa17.88■□□□□ 0.45
Shank1-201ENSMUST00000107934 Tmco5aQ9D9D5 303 aa17.88■□□□□ 0.45
Shank1-201ENSMUST00000107934 PalldQ9ET54 1408 aa17.88■□□□□ 0.45
Shank1-201ENSMUST00000107934 Prrc2bQ7TPM1 1486 aaKnown RBP17.88■□□□□ 0.45
Shank1-201ENSMUST00000107934 Palm3A2TJV2 734 aa17.88■□□□□ 0.45
Shank1-201ENSMUST00000107934 Sh3tc1G3X9F6 1346 aa17.88■□□□□ 0.45
Shank1-201ENSMUST00000107934 Pola1P33609 1465 aa17.88■□□□□ 0.45
Shank1-201ENSMUST00000107934 Cbx1P83917 185 aaKnown RBP17.87■□□□□ 0.45
Shank1-201ENSMUST00000107934 Ift88Q61371 824 aa17.87■□□□□ 0.45
Shank1-201ENSMUST00000107934 Mrps27Q8BK72 415 aaKnown RBP17.87■□□□□ 0.45
Shank1-201ENSMUST00000107934 Cfap74Q3UY96 1578 aa17.87■□□□□ 0.45
Shank1-201ENSMUST00000107934 Lrrc7Q80TE7 1490 aa17.87■□□□□ 0.45
Shank1-201ENSMUST00000107934 Abcc6Q9R1S7 1498 aa17.87■□□□□ 0.45
Shank1-201ENSMUST00000107934 Jarid2Q62315 1234 aa17.87■□□□□ 0.45
Shank1-201ENSMUST00000107934 Fermt1P59113 677 aa17.87■□□□□ 0.45
Shank1-201ENSMUST00000107934 Cdca8Q8BHX3 289 aa17.87■□□□□ 0.45
Shank1-201ENSMUST00000107934 Ccdc12Q8R344 166 aaKnown RBP17.87■□□□□ 0.45
Shank1-201ENSMUST00000107934 F2rP30558 430 aa17.87■□□□□ 0.45
Shank1-201ENSMUST00000107934 Cep135Q6P5D4 1140 aa17.87■□□□□ 0.45
Shank1-201ENSMUST00000107934 Hdhd2Q3UGR5 259 aa17.87■□□□□ 0.45
Shank1-201ENSMUST00000107934 Exoc1Q8R3S6 894 aa17.87■□□□□ 0.45
Shank1-201ENSMUST00000107934 Gli2Q0VGT2 1544 aa17.86■□□□□ 0.45
Shank1-201ENSMUST00000107934 Pla2g4fQ50L41 855 aa17.86■□□□□ 0.45
Shank1-201ENSMUST00000107934 Asic1Q6NXK8 526 aa17.86■□□□□ 0.45
Shank1-201ENSMUST00000107934 Abcc1O35379 1528 aa17.86■□□□□ 0.45
Shank1-201ENSMUST00000107934 Epb41l2O70318 988 aaKnown RBP17.86■□□□□ 0.45
Shank1-201ENSMUST00000107934 Chmp6P0C0A3 200 aa17.86■□□□□ 0.45
Shank1-201ENSMUST00000107934 SympkQ80X82 1284 aa17.86■□□□□ 0.45
Shank1-201ENSMUST00000107934 Ccdc122Q8BVN0 290 aa17.86■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 61.9 ms