RNA–Protein interactions for RNA: ENSMUST00000088973.10

Smarca1-202, Transcript of Probable global transcription activator SNF2L1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Smarca1, Length 4,798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1-202ENSMUST00000088973 Ankrd40Q5SUE8 363 aa11.48□□□□□ -0.57
Smarca1-202ENSMUST00000088973 Ppp4r3aQ6P2K6 820 aa11.48□□□□□ -0.57
Smarca1-202ENSMUST00000088973 Tti2Q8BGV4 512 aa11.48□□□□□ -0.57
Smarca1-202ENSMUST00000088973 Klhl30Q8C3F7 581 aa11.48□□□□□ -0.57
Smarca1-202ENSMUST00000088973 Ssh2Q5SW75 1423 aa11.47□□□□□ -0.57
Smarca1-202ENSMUST00000088973 Rnf216P58283 853 aa11.47□□□□□ -0.57
Smarca1-202ENSMUST00000088973 Sptlc2P97363 560 aaKnown RBP11.47□□□□□ -0.57
Smarca1-202ENSMUST00000088973 Abtb2Q7TQI7 1024 aa11.47□□□□□ -0.57
Smarca1-202ENSMUST00000088973 Hook3Q8BUK6 718 aa11.47□□□□□ -0.57
Smarca1-202ENSMUST00000088973 2310002L09RikQ9D7L5 217 aa11.47□□□□□ -0.57
Smarca1-202ENSMUST00000088973 Pkd2l2Q9JLG4 621 aa11.47□□□□□ -0.57
Smarca1-202ENSMUST00000088973 Ak2Q9WTP6 239 aa11.47□□□□□ -0.57
Smarca1-202ENSMUST00000088973 CalrP14211 416 aaKnown RBP11.47□□□□□ -0.57
Smarca1-202ENSMUST00000088973 Tyro3P55144 880 aa11.47□□□□□ -0.57
Smarca1-202ENSMUST00000088973 Cnnm2Q3TWN3 875 aa11.47□□□□□ -0.57
Smarca1-202ENSMUST00000088973 Ifit2Q64112 472 aa11.47□□□□□ -0.57
Smarca1-202ENSMUST00000088973 Pdzrn3Q69ZS0 1063 aa11.47□□□□□ -0.57
Smarca1-202ENSMUST00000088973 Ankrd13dQ6PD24 605 aa11.47□□□□□ -0.57
Smarca1-202ENSMUST00000088973 Nek11Q8C0Q4 628 aa11.47□□□□□ -0.57
Smarca1-202ENSMUST00000088973 Syt10Q9R0N4 523 aa11.47□□□□□ -0.57
Smarca1-202ENSMUST00000088973 Myl3P09542 204 aa11.47□□□□□ -0.57
Smarca1-202ENSMUST00000088973 Aldh1l2Q8K009 923 aa11.47□□□□□ -0.57
Smarca1-202ENSMUST00000088973 Matr3Q8K310 846 aaKnown RBP11.47□□□□□ -0.57
Smarca1-202ENSMUST00000088973 Ndufa8Q9DCJ5 172 aa11.47□□□□□ -0.57
Smarca1-202ENSMUST00000088973 Kifc2O08672 792 aa11.47□□□□□ -0.57
Smarca1-202ENSMUST00000088973 Zbtb45Q52KG4 520 aa11.47□□□□□ -0.57
Smarca1-202ENSMUST00000088973 Tbc1d5Q80XQ2 815 aa11.47□□□□□ -0.57
Smarca1-202ENSMUST00000088973 Slc39a6Q8C145 765 aa11.47□□□□□ -0.57
Smarca1-202ENSMUST00000088973 MthfsQ9D110 203 aa11.47□□□□□ -0.57
Smarca1-202ENSMUST00000088973 Smco2Q9DA21 347 aa11.47□□□□□ -0.57
Smarca1-202ENSMUST00000088973 Naa15Q80UM3 865 aaKnown RBP11.46□□□□□ -0.57
Smarca1-202ENSMUST00000088973 Nop53Q8BK35 484 aaKnown RBP11.46□□□□□ -0.57
Smarca1-202ENSMUST00000088973 Rapgef3Q8VCC8 918 aa11.46□□□□□ -0.57
Smarca1-202ENSMUST00000088973 Mrps25Q9D125 171 aaKnown RBP11.46□□□□□ -0.57
Smarca1-202ENSMUST00000088973 Prpf40aQ9R1C7 953 aaKnown RBP11.46□□□□□ -0.57
Smarca1-202ENSMUST00000088973 Letm1Q9Z2I0 738 aa11.46□□□□□ -0.57
Smarca1-202ENSMUST00000088973 Zfp42P22227 288 aa11.46□□□□□ -0.57
Smarca1-202ENSMUST00000088973 Map2k1P31938 393 aa11.46□□□□□ -0.57
Smarca1-202ENSMUST00000088973 Aifm3Q3TY86 605 aa11.46□□□□□ -0.57
Smarca1-202ENSMUST00000088973 PxdnQ3UQ28 1475 aa11.46□□□□□ -0.57
Smarca1-202ENSMUST00000088973 Akap2O54931 893 aa11.46□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Calml4Q91WQ9 153 aa11.46□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Erlin1Q91X78 346 aa11.46□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Mug2P28666 1451 aa11.46□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Ncf1Q09014 390 aa11.46□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Hs2st1Q8R3H7 356 aa11.46□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Cfap53Q9D439 514 aa11.46□□□□□ -0.58
Smarca1-202ENSMUST00000088973 AmfrQ9R049 643 aa11.46□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Sbno1Q689Z5 1390 aa11.45□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Arglu1Q3UL36 271 aaKnown RBP11.45□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Pram1Q6BCL1 675 aa11.45□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Cyp4f39Q8BGU0 532 aa11.45□□□□□ -0.58
Smarca1-202ENSMUST00000088973 ThemisQ8BGW0 636 aa11.45□□□□□ -0.58
Smarca1-202ENSMUST00000088973 LarsQ8BMJ2 1178 aa11.45□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Bbof1Q3V079 533 aa11.45□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Ift88Q61371 824 aa11.45□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Prkab2Q6PAM0 271 aa11.45□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Rufy3Q9D394 469 aa11.45□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Tom1O88746 492 aa11.45□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Pla2g4fQ50L41 855 aa11.45□□□□□ -0.58
Smarca1-202ENSMUST00000088973 RalylQ8BTF8 293 aa11.45□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Krt79Q8VED5 531 aa11.45□□□□□ -0.58
Smarca1-202ENSMUST00000088973 NpcdF8VQB8 469 aa11.44□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Atp2b1G5E829 1220 aa11.44□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Rbm26Q6NZN0 1012 aaKnown RBP11.44□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Ccdc82Q6PG04 518 aa11.44□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Zkscan16A2ALW2 728 aa11.44□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Ppip5k1A2ARP1 1436 aa11.44□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Cetn1P41209 172 aa11.44□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Timm10P62073 90 aa11.44□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Hdhd2Q3UGR5 259 aa11.44□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Brd3Q8K2F0 726 aaKnown RBP11.44□□□□□ -0.58
Smarca1-202ENSMUST00000088973 LratQ9JI60 231 aa11.44□□□□□ -0.58
Smarca1-202ENSMUST00000088973 GnaqP21279 359 aa11.44□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Vps54Q5SPW0 977 aa11.44□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Ctr9Q62018 1173 aaKnown RBP11.44□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Lmbrd2Q8C561 694 aa11.44□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Ddx27Q921N6 760 aaKnown RBP11.44□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Mcm6P97311 821 aa11.43□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Akr1c19G3X9Y6 323 aa11.43□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Mmp8O70138 465 aa11.43□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Asic1Q6NXK8 526 aa11.43□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Tekt3Q6X6Z7 490 aa11.43□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Casp1P29452 402 aa11.43□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Ctnna2Q61301 953 aa11.43□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Arhgef18Q6P9R4 1021 aa11.43□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Ctdp1Q7TSG2 960 aa11.43□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Exoc1Q8R3S6 894 aa11.43□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Acot9Q9R0X4 439 aaKnown RBP11.43□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Rlbp1Q9Z275 317 aa11.43□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Sycp2lA0A0M3U1B0 842 aa11.43□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Spocd1B1ASB6 936 aa11.43□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Myo1bP46735 1107 aa11.43□□□□□ -0.58
Smarca1-202ENSMUST00000088973 IntuQ059U7 942 aa11.43□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Zkscan4Q5SZT6 480 aa11.43□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Rab3gap1Q80UJ7 981 aa11.43□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Dydc2Q9D3X8 139 aa11.43□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Arhgef12Q8R4H2 1543 aaKnown RBP11.42□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Fam43aQ8BUP8 424 aa11.42□□□□□ -0.58
Smarca1-202ENSMUST00000088973 Rtn1Q8K0T0 780 aa11.42□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 29.5 ms