RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 BcanQ61361 883 aa13.65□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Rab3gap1Q80UJ7 981 aa13.65□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Ubxn10Q8BG34 277 aa13.65□□□□□ -0.22
Col9a1-202ENSMUST00000088349 Ddx46Q569Z5 1032 aaKnown RBP13.65□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Ano8Q6PB70 1060 aa13.65□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Hnrnpul1Q8VDM6 859 aaKnown RBP13.65□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Hmgn5Q9JL35 406 aa13.65□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Myo5bP21271 1818 aa13.64□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Gm21663A0A0G2JE01 267 aa13.64□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Irgm2A0A140LIF8 407 aa13.64□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Gm7361D3Z6R1 267 aa13.64□□□□□ -0.23
Col9a1-202ENSMUST00000088349 5031410I06RikE9Q4E0 267 aa13.64□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Gm1979E9QAN3 267 aa13.64□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Gm5862K7N5V5 267 aa13.64□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Gm10220K7N660 267 aa13.64□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Hmx1O70218 332 aa13.64□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Cct2P80314 535 aaKnown RBP13.64□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Adam1bQ8R534 806 aa13.64□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Syt10Q9R0N4 523 aa13.64□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Aox2Q5SGK3 1345 aa13.64□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Mst1rQ62190 1378 aa13.64□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Tpm3P21107 285 aaKnown RBP13.64□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Vps54Q5SPW0 977 aa13.64□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Atf3Q60765 181 aa13.64□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Kiaa0753Q6A000 959 aa13.64□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Nlrp3Q8R4B8 1033 aa13.64□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Pus3Q9JI38 481 aa13.64□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Txnrd1Q9JMH6 613 aa13.64□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Tmem2Q5FWI3 1383 aa13.63□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Stat1P42225 749 aa13.63□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Srgap1Q91Z69 1062 aa13.63□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Tns3Q5SSZ5 1440 aa13.63□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Aox1O54754 1333 aa13.63□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Eif3aP23116 1344 aaKnown RBP13.63□□□□□ -0.23
Col9a1-202ENSMUST00000088349 CrklP47941 303 aa13.63□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Hook1Q8BIL5 728 aa13.63□□□□□ -0.23
Col9a1-202ENSMUST00000088349 R3hcc1Q8BSI6 488 aa13.63□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Pdia6Q922R8 440 aaKnown RBP13.63□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Pes1Q9EQ61 584 aaKnown RBP13.63□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Rbbp8nlA2ABX0 614 aa13.62□□□□□ -0.23
Col9a1-202ENSMUST00000088349 1700113H08RikE9Q9Q5 327 aa13.62□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Soga3Q6NZL0 945 aa13.62□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Pcdhb15Q91Y04 786 aa13.62□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Rrs1Q9CYH6 365 aaKnown RBP13.62□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Cfap58B2RW38 873 aa13.62□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Ncoa4Q5U4H9 625 aa13.62□□□□□ -0.23
Col9a1-202ENSMUST00000088349 TkfcQ8VC30 578 aa13.62□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Taf7Q9R1C0 341 aa13.62□□□□□ -0.23
Col9a1-202ENSMUST00000088349 NalcnQ8BXR5 1738 aa13.62□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Golgb1E9PVZ8 3238 aa13.62□□□□□ -0.23
Col9a1-202ENSMUST00000088349 C3P01027 1663 aa13.61□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Usp28Q5I043 1051 aa13.61□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Ccz1Q8C1Y8 480 aa13.61□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Ttc27Q8CD92 847 aa13.61□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Lrrfip2Q91WK0 415 aa13.61□□□□□ -0.23
Col9a1-202ENSMUST00000088349 TefQ9JLC6 301 aa13.61□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Atp8b3Q6UQ17 1335 aa13.61□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Timm10P62073 90 aa13.61□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Atp1a3Q6PIC6 1013 aa13.61□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Asic4Q7TNS7 539 aa13.61□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Zfp317Q8C0Q5 607 aa13.61□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Amigo3Q8C2S7 508 aa13.61□□□□□ -0.23
Col9a1-202ENSMUST00000088349 StrbpQ91WM1 672 aaKnown RBP13.61□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Tomm22Q9CPQ3 142 aa13.61□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Ifi35Q9D8C4 286 aa13.61□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Gm21680A0A0G2JGR8 267 aa13.6□□□□□ -0.23
Col9a1-202ENSMUST00000088349 DbnlQ62418 436 aa13.6□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Plcd3Q8K2J0 785 aa13.6□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Phkg2Q9DB30 406 aa13.6□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Col15a1O35206 1367 aa13.6□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Trpm3Q5F4S9 1721 aa13.6□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Zhx1P70121 873 aa13.6□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Lmbrd2Q8C561 694 aa13.6□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Rapgef3Q8VCC8 918 aa13.6□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Topaz1E5FYH1 1653 aa13.6□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Gm45140A0A0N4SUM8 220 aa13.6□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Prl7a2O54831 253 aa13.6□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Ccer1Q9CQL2 403 aa13.6□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Mtx1P47802 317 aa13.59□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Ap5z1Q3U829 807 aa13.59□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Csrnp1P59054 583 aa13.59□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Ppp1r10Q80W00 888 aaKnown RBP13.59□□□□□ -0.23
Col9a1-202ENSMUST00000088349 SnrkQ8VDU5 748 aa13.59□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Smim5Q8BT42 78 aa13.58□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Ccdc158Q8CDI6 1109 aa13.58□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Tlcd1Q99JT6 247 aa13.58□□□□□ -0.23
Col9a1-202ENSMUST00000088349 PhaxQ9JJT9 385 aaKnown RBP13.58□□□□□ -0.23
Col9a1-202ENSMUST00000088349 Flt4P35917 1363 aa13.58□□□□□ -0.24
Col9a1-202ENSMUST00000088349 NpeppsQ11011 920 aa13.58□□□□□ -0.24
Col9a1-202ENSMUST00000088349 TfrcQ62351 763 aaKnown RBP13.58□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Rhot2Q8JZN7 620 aa13.58□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Efcab2Q9CQ46 164 aa13.58□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Fsd1Q7TPM6 496 aa13.58□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Dis3l2Q8CI75 870 aaKnown RBP13.58□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Osbpl5Q9ER64 874 aa13.58□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Ptpn23Q6PB44 1692 aa13.57□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Rims2Q9EQZ7 1530 aa13.57□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Frat1P70339 274 aa13.57□□□□□ -0.24
Col9a1-202ENSMUST00000088349 HellsQ60848 821 aa13.57□□□□□ -0.24
Col9a1-202ENSMUST00000088349 Fkbp5Q64378 456 aa13.57□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 24.5 ms