RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 DbnlQ62418 436 aa13.51□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Dis3l2Q8CI75 870 aaKnown RBP13.51□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Fam13bQ8K2H3 851 aa13.51□□□□□ -0.25
Ddx55-201ENSMUST00000071057 F2rP30558 430 aa13.5□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Igflr1Q3U4N7 345 aa13.5□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Ankib1Q6ZPS6 1085 aa13.5□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Tmem87bQ8BKU8 555 aa13.5□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Trerf1Q8BXJ2 1205 aa13.5□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Ltb4r2Q9JJL9 360 aa13.5□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Mst1rQ62190 1378 aa13.5□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Gjb2Q00977 226 aa13.5□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Mkrn3Q60764 544 aa13.5□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Ifit2Q64112 472 aa13.5□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Chmp3Q9CQ10 224 aa13.5□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Rmi1Q9D4G9 616 aa13.5□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Stard3nlQ9DCI3 235 aa13.5□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Myd88P22366 296 aa13.49□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Cpa2Q504N0 417 aa13.49□□□□□ -0.25
Ddx55-201ENSMUST00000071057 R3hcc1Q8BSI6 488 aa13.49□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Cwc25Q9DBF7 416 aa13.49□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Znf771Q8BJ90 317 aa13.49□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Pof1bQ8K4L4 587 aa13.49□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Rrs1Q9CYH6 365 aaKnown RBP13.49□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Mdm2P23804 489 aa13.49□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Utp18Q5SSI6 552 aaKnown RBP13.49□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Ddx11Q6AXC6 880 aa13.49□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Ttc19Q8CC21 365 aa13.49□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Ccdc94Q9D6J3 314 aa13.49□□□□□ -0.25
Ddx55-201ENSMUST00000071057 MecomP14404 1042 aa13.48□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Gm12185Q5NCB2 835 aa13.48□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Vps54Q5SPW0 977 aa13.48□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Ddrgk1Q80WW9 315 aa13.48□□□□□ -0.25
Ddx55-201ENSMUST00000071057 KinQ8K339 391 aa13.48□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Crb1Q8VHS2 1405 aa13.48□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Ank1Q02357 1862 aa13.48□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Ankrd49Q8VE42 238 aa13.48□□□□□ -0.25
Ddx55-201ENSMUST00000071057 AK157302I3ITR1 129 aa13.47□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Smarce1O54941 411 aaKnown RBP13.47□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Pde3bQ61409 1100 aa13.47□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Ints3Q7TPD0 1041 aaKnown RBP13.47□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Bcl11bQ99PV8 884 aa13.47□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Isca1Q9D924 129 aa13.47□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Znf704Q9ERQ3 566 aa13.47□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Erbb4Q61527 1308 aa13.47□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Irx2P81066 474 aa13.47□□□□□ -0.25
Ddx55-201ENSMUST00000071057 BcanQ61361 883 aa13.47□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Apbb1ipQ8R5A3 670 aa13.47□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Rbm8a2A0A0N4SUH6 174 aa13.46□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Ccdc173A0JLY1 547 aa13.46□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Elmsan1E9Q2I4 1089 aaKnown RBP13.46□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Sult6b1P0CC03 303 aa13.46□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Atp6v1dP57746 247 aa13.46□□□□□ -0.25
Ddx55-201ENSMUST00000071057 St18Q80TY4 1045 aa13.46□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Nol12Q8BG17 217 aa13.46□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Rbm8aQ9CWZ3 174 aa13.46□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Prl3d3A0A0M6L0J6 224 aa13.46□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Rbbp8nlA2ABX0 614 aa13.46□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Timm10P62073 90 aa13.46□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Cdca7lQ922M5 438 aa13.46□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Nip7Q9CXK8 180 aaKnown RBP13.46□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Add2Q9QYB8 725 aa13.46□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Tceanc2Q8R2M0 207 aa13.45□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Ccdc7Q9D541 371 aa13.45□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Fam84aQ9D650 292 aa13.45□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Hdac6Q9Z2V5 1149 aa13.45□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Rufy3Q9D394 469 aa13.45□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Ak2Q9WTP6 239 aa13.45□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Tti2Q8BGV4 512 aa13.44□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Fam213aQ9CYH2 218 aa13.44□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Zeb2Q9R0G7 1215 aa13.44□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Gm45015A0A140LII9 184 aa13.44□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Gm18336A0A140LIU8 765 aa13.44□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Ugt1a5B2RT14 529 aa13.44□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Il4rP16382 810 aa13.44□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Zmynd15Q8C0R7 736 aa13.44□□□□□ -0.26
Ddx55-201ENSMUST00000071057 TrdnE9Q9K5 693 aa13.43□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Zbtb38Q3LR78 1197 aa13.43□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Mctp2Q5RJH2 878 aa13.43□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Atg9aQ68FE2 551 aa13.43□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Dcaf5Q80T85 946 aa13.43□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Smc4Q8CG47 1286 aa13.43□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Rhot2Q8JZN7 620 aa13.43□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Erich6bQ9D4S6 220 aa13.43□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Kcnh4A2A5F7 1018 aa13.43□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Strn4P58404 760 aa13.43□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Sik1Q60670 779 aa13.43□□□□□ -0.26
Ddx55-201ENSMUST00000071057 GptQ8QZR5 496 aa13.43□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Polr3dQ91WD1 398 aa13.43□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Mylk2Q8VCR8 613 aa13.43□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Q9D9S1 216 aa13.43□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Irx5Q9JKQ4 484 aa13.43□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Sos2Q02384 1333 aa13.42□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Shank3Q4ACU6 1730 aa13.42□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Gadd45bP22339 160 aa13.42□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Ppp4r3aQ6P2K6 820 aa13.42□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Ubxn10Q8BG34 277 aa13.42□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Tmc2Q8R4P4 888 aa13.42□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Pus3Q9JI38 481 aa13.42□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Ybx3Q9JKB3 361 aaKnown RBP13.42□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Hspa1lP16627 641 aa13.42□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 40.3 ms