RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Abcc10Q8R4P9 1501 aa11.4□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Zfp804bA0A0G2JGH6 1343 aa11.4□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 AidaQ8C4Q6 305 aa11.4□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Nrbp1Q99J45 535 aa11.4□□□□□ -0.58
Pcdh1-201ENSMUST00000057185 Leo1Q5XJE5 667 aa11.4□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Atp1a3Q6PIC6 1013 aa11.4□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Sgsm2Q80U12 1005 aa11.4□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Ptcd1Q8C2E4 695 aaKnown RBP11.4□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Ddx54Q8K4L0 874 aaKnown RBP11.4□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Rbm42Q91V81 474 aaKnown RBP11.4□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Phkg2Q9DB30 406 aa11.4□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Abl1P00520 1123 aa11.39□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 FanccP50652 591 aa11.39□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Gabpb2P81069 414 aa11.39□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Cplx2P84086 134 aa11.39□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Efcab2Q9CQ46 164 aa11.39□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Kif20bQ80WE4 1774 aaKnown RBP11.39□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Mdc1Q5PSV9 1707 aa11.39□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 PplQ9R269 1755 aa11.39□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Col1a2Q01149 1372 aa11.39□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Hoxa7P02830 229 aa11.39□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Rps6kb1Q8BSK8 525 aa11.39□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Gimap5Q8BWF2 308 aa11.39□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Ccdc7Q9D541 371 aa11.39□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Txnrd1Q9JMH6 613 aa11.39□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Kdm6aO70546 1401 aa11.39□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Mybbp1aQ7TPV4 1344 aaKnown RBP11.39□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 CrcpO35427 148 aa11.39□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Cfap157Q0VFX2 523 aa11.39□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Prpf4bQ61136 1007 aaKnown RBP11.39□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Chrna2Q91X60 512 aa11.39□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Spef2Q8C9J3 1734 aa11.39□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Ms4a2P20490 235 aa11.38□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Rad17Q6NXW6 688 aa11.38□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Kank4Q6P9J5 1016 aa11.38□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Tubb6Q922F4 447 aa11.38□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Atg3Q9CPX6 314 aa11.38□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Cps1Q8C196 1500 aa11.38□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Tpm3-rs7D3Z2H9 248 aa11.38□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Ppp1r37Q8BKR5 712 aa11.38□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Fsd2Q8BZ52 692 aa11.38□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Rbm17Q8JZX4 405 aaKnown RBP11.38□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Tmx1Q8VBT0 278 aa11.38□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Nfe2l3Q9WTM4 660 aa11.38□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Alpk3Q924C5 1678 aa11.38□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Brpf3B2KF05 1204 aaKnown RBP11.38□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 U2af2P26369 475 aaKnown RBP11.38□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Asic4Q7TNS7 539 aa11.38□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Lnx1O70263 728 aa11.37□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Mrpl44Q9CY73 333 aaKnown RBP11.37□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Prl7a2O54831 253 aa11.37□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Zhx1P70121 873 aa11.37□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Gnat3Q3V3I2 354 aa11.37□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Ppp1r10Q80W00 888 aaKnown RBP11.37□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Pus3Q9JI38 481 aa11.37□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Mx2Q9WVP9 655 aa11.37□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Kif1aP33173 1695 aa11.37□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Oas2E9Q9A9 742 aa11.37□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Agtpbp1Q641K1 1218 aa11.37□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Tnrc6bQ8BKI2 1810 aaKnown RBP11.36□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Tom1O88746 492 aa11.36□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Nkx2-3P97334 362 aa11.36□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Plcd1Q8R3B1 756 aa11.36□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Luzp1Q8R4U7 1068 aaKnown RBP11.36□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Hmg20bQ9Z104 317 aa11.36□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Spata31d1bE9QA57 1361 aa11.36□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Myd88P22366 296 aa11.36□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Gsdma2Q32M21 443 aa11.36□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Fam228bQ497Q6 232 aa11.36□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Zfp251Q6PCX8 632 aa11.36□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Ccdc82Q6PG04 518 aa11.36□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Tmem87bQ8BKU8 555 aa11.36□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Pnma3Q8JZW8 466 aa11.36□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Odf2lQ9D478 642 aa11.36□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Fam84aQ9D650 292 aa11.36□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Tmem2Q5FWI3 1383 aa11.36□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Tns3Q5SSZ5 1440 aa11.36□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Eif5P59325 429 aaKnown RBP11.36□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Nxf2Q4ZGD8 691 aa11.36□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Ankle2Q6P1H6 964 aa11.36□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 U2af1l4Q8BGJ9 220 aa11.36□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Trim25Q61510 634 aaKnown RBP11.35□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Cep135Q6P5D4 1140 aa11.35□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Gm21985Q6P6P5 1106 aa11.35□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Ddx58Q6Q899 926 aa11.35□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 ApobrQ8VBT6 942 aa11.35□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Ccdc112A0AUP1 442 aa11.35□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Washc4Q3UMB9 1173 aa11.35□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Zfp91Q62511 572 aa11.35□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Phf23Q8BSN5 401 aa11.35□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Nek11Q8C0Q4 628 aa11.35□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 DpydQ8CHR6 1025 aa11.35□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Gnl2Q99LH1 728 aaKnown RBP11.35□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Ccdc47Q9D024 483 aaKnown RBP11.35□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Plekhd1B2RPU2 505 aa11.35□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Zscan29E9Q5B4 869 aa11.35□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Stx1aO35526 288 aa11.35□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 LyarQ08288 388 aaKnown RBP11.35□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Ccdc162pQ0VG85 912 aa11.35□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Adam1aQ60813 791 aa11.35□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 786 ms