RNA–Protein interactions for RNA: ENSMUST00000053414.12

Ccdc171-201, Transcript of Coiled-coil domain-containing protein 171, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Ccdc171, Length 4,525 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc171-201ENSMUST00000053414 Osbpl5Q9ER64 874 aa10.85□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Shank2Q80Z38 1476 aa10.85□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Atf5O70191 283 aa10.85□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Chrm1P12657 460 aa10.85□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 MecomP14404 1042 aa10.85□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Cwc27Q3TKY6 469 aa10.85□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Panx2Q6IMP4 677 aa10.85□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Fez2Q6TYB5 348 aa10.85□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Wdr33Q8K4P0 1330 aaKnown RBP10.84□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Atp6v1dP57746 247 aa10.84□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Tgfb1i1Q62219 461 aa10.84□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Kiaa1524Q8BWY9 907 aa10.84□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Ints4Q8CIM8 964 aa10.84□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Aox1O54754 1333 aa10.84□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Spata16Q8C636 571 aa10.84□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Nop14Q8R3N1 860 aaKnown RBP10.84□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Dact1Q8R4A3 778 aa10.84□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Pibf1E9Q6K3 756 aa10.84□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Serpinb6bO08804 377 aa10.84□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Csrnp1P59054 583 aa10.84□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Cd37Q61470 281 aa10.84□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Shisa4Q8CA71 197 aa10.84□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Col4a1P02463 1669 aa10.84□□□□□ -0.67
Ccdc171-201ENSMUST00000053414 Pramel3A2AHA7 463 aa10.83□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Gm7903A2AWL1 463 aa10.83□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 AV320801A2AWL3 467 aa10.83□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Gm15023L7MUB4 467 aa10.83□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Znf326O88291 580 aa10.83□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Atp2b1G5E829 1220 aa10.83□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Myh7bA2AQP0 1941 aa10.83□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Dnm3Q8BZ98 863 aa10.83□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Mad1l1Q9WTX8 717 aaKnown RBP10.83□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Magi2Q9WVQ1 1275 aa10.83□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Atp8b3Q6UQ17 1335 aa10.83□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Nid2O88322 1403 aa10.83□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Usp48Q3V0C5 1052 aa10.83□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Itga6Q61739 1091 aa10.83□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Mei4Q8BRM6 389 aa10.83□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Rgs12Q8CGE9 1381 aa10.82□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 FocadA2AKG8 1798 aa10.82□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Gm21190A0A0G2JGJ6 266 aa10.82□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Emc10Q3TAS6 258 aa10.82□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Frat2Q8K025 231 aa10.82□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Rbm33Q9CXK9 1231 aaKnown RBP10.82□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Samd1D3YXK1 519 aa10.82□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Cfdp1O88271 295 aaKnown RBP10.82□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Tpm3P21107 285 aaKnown RBP10.82□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Zbtb40Q6PCS8 1258 aa10.82□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Abcc12Q80WJ6 1366 aa10.82□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Kif2aP28740 705 aa10.82□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Q8CEZ4 452 aa10.82□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Mtmr6Q8VE11 617 aa10.82□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Ifit1Q64282 463 aa10.81□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Dixdc1Q80Y83 711 aa10.81□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Ank1Q02357 1862 aa10.81□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Abca3Q8R420 1704 aa10.81□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Fmnl2A2APV2 1086 aa10.81□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Cyp2d34L7N463 504 aa10.81□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Tmem2Q5FWI3 1383 aa10.81□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 TmpoQ61033 693 aaKnown RBP10.81□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Fhod1Q6P9Q4 1197 aa10.81□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Sv2bQ8BG39 683 aa10.81□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Tada3Q8R0L9 432 aa10.81□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 PdcQ9QW08 244 aa10.81□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 FAM186AQ9D9R9 1790 aa10.81□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Ric8aQ3TIR3 530 aa10.81□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Stk3Q9JI10 497 aa10.81□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Abcc4E9Q236 1325 aa10.8□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Znf568E9PYI1 671 aa10.8□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Nbr1P97432 988 aa10.8□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 HrQ61645 1182 aa10.8□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Casc1Q6TDU8 730 aa10.8□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Cnnm3Q32NY4 713 aa10.8□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Polr3gQ6NXY9 223 aa10.8□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Smc3Q9CW03 1217 aaKnown RBP10.8□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Rgs9O54828 675 aa10.8□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Usp13Q5BKP2 858 aa10.8□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Bend3Q6PAL0 825 aa10.8□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Edc3Q8K2D3 508 aaKnown RBP10.8□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Ak2Q9WTP6 239 aa10.8□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Astn2Q80Z10 1352 aa10.8□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Arap3Q8R5G7 1538 aa10.79□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Actn3O88990 900 aaKnown RBP10.79□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Igfbp6P47880 238 aa10.79□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 CoilQ5SU73 570 aa10.79□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Sox30Q8CGW4 782 aa10.79□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Sf3a1Q8K4Z5 791 aaKnown RBP10.79□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Bicd2Q921C5 820 aa10.79□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 HnrnpmQ9D0E1 729 aaKnown RBP10.79□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Mctp2Q5RJH2 878 aa10.79□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Rsrc2A2RTL5 376 aaKnown RBP10.79□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Ppfia1B2RXQ2 1266 aa10.79□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Rnaseh1O70338 285 aa10.79□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Smarcc2Q6PDG5 1213 aa10.79□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Igsf3Q6ZQA6 1194 aa10.79□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Ift57Q8BXG3 429 aa10.79□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Otud6bQ8K2H2 294 aa10.79□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 1700019A02RikA0A087WPV9 146 aa10.78□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Mctp1E9PV86 951 aa10.78□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 NmiO35309 314 aa10.78□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms